Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060916.1 Olea europaea HOM05D001960 ORTHO05D007725 1.7e-282 975.3 480 100.0
Oeu033340.1 Olea europaea HOM05D001960 ORTHO05D007725 1.0e-231 806.6 463 86.0
Migut.K01335 Erythranthe guttata HOM05D001960 ORTHO05D007725 8.2e-229 797.0 480 81.5
SalBow1G8169 Salvia bowleyana HOM05D001960 ORTHO05D007725 5.7e-222 774.2 485 77.9
SGA_v2.0_scaffold30G12523 Striga asiatica HOM05D001960 ORTHO05D007725 1.8e-220 769.2 488 77.9
MSTRG.15488 Avicennia marina HOM05D001960 ORTHO05D007725 5.9e-219 764.2 483 78.3
CSS0036057 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D007725 7.7e-219 763.8 488 77.5
QL02p080348 Quercus lobata HOM05D001960 ORTHO05D007725 7.7e-219 763.8 485 77.1
Actinidia06068 Actinidia chinensis HOM05D001960 ORTHO05D007725 1.9e-217 759.2 486 77.2
Atru.chr8.1915 Acer truncatum HOM05D001960 ORTHO05D007725 5.5e-217 757.7 482 76.1
Nitab4.5_0000564g0320 Nicotiana tabacum HOM05D001960 ORTHO05D007725 4.7e-216 754.6 484 76.0
Nitab4.5_0002265g0270 Nicotiana tabacum HOM05D001960 ORTHO05D007725 3.9e-215 751.5 484 76.2
Sopen02g032390 Solanum pennellii HOM05D001960 ORTHO05D007725 5.1e-215 751.1 484 75.4
Solyc02g087640.3 Solanum lycopersicum HOM05D001960 ORTHO05D007725 1.1e-214 750.0 484 75.6
Cfa007507 Carpinus fangiana HOM05D001960 ORTHO05D007725 1.7e-213 746.1 454 78.4
CANSAT64G2224 Cannabis sativa HOM05D001960 ORTHO05D007725 2.8e-213 745.3 487 75.6
CAN.G206.108 Capsicum annuum HOM05D001960 ORTHO05D007725 2.8e-213 745.3 485 75.5
Cc01_g00810 Coffea canephora HOM05D001960 ORTHO05D007725 3.7e-213 745.0 490 76.3
Thecc.04G074100 Theobroma cacao HOM05D001960 ORTHO05D007725 1.1e-212 743.4 483 74.9
TAR371G1229 Trochodendron aralioides HOM05D001960 ORTHO05D007725 1.4e-212 743.0 491 74.9
PGSC0003DMG400001411 Solanum tuberosum HOM05D001960 ORTHO05D007725 7.0e-212 740.7 484 75.2
Gohir.D04G050500 Gossypium hirsutum HOM05D001960 ORTHO05D007725 5.9e-211 737.6 485 74.2
Manes.17G020800 Manihot esculenta HOM05D001960 ORTHO05D007725 7.7e-211 737.3 488 76.4
RhsimUnG0055000 Rhododendron simsii HOM05D001960 ORTHO05D007725 1.3e-210 736.5 486 75.3
Ciclev10011611m.g Citrus clementina HOM05D001960 ORTHO05D007725 2.2e-210 735.7 484 74.4
Gorai.012G056000 Gossypium raimondii HOM05D001960 ORTHO05D007725 3.8e-210 734.9 485 73.8
TWI34G1416 Tripterygium wilfordii HOM05D001960 ORTHO05D007725 3.8e-210 734.9 485 73.8
CiPaw.03G030400 Carya illinoinensis HOM05D001960 ORTHO05D007725 1.4e-209 733.0 451 77.2
Hma1.2p1_1232F.1_g268880 Hydrangea macrophylla HOM05D001960 ORTHO05D007725 1.9e-209 732.6 432 79.6
MELO3C021973.2 Cucumis melo HOM05D001960 ORTHO05D007725 7.2e-209 730.7 493 72.6
Haze_14586 Corylus avellana HOM05D001960 ORTHO05D007725 9.4e-209 730.3 492 72.8
RcHm_v2.0_Chr2g0169211 Rosa chinensis HOM05D001960 ORTHO05D007725 1.2e-208 729.9 484 74.4
Prupe.3G272300 Prunus persica HOM05D001960 ORTHO05D007725 3.6e-208 728.4 491 73.7
MD09G1045900 Malus domestica HOM05D001960 ORTHO05D007725 3.9e-207 724.9 493 73.0
Sabra17G0069200 Salix brachista HOM05D001960 ORTHO05D007725 3.9e-207 724.9 486 74.1
DCAR_006720 Daucus carota HOM05D001960 ORTHO05D007725 6.7e-207 724.2 525 69.1
CsaV3_5G037870 Cucumis sativus L. HOM05D001960 ORTHO05D007725 2.6e-206 722.2 452 76.1
Potri.017G077000 Populus trichocarpa HOM05D001960 ORTHO05D007725 9.7e-206 720.3 487 73.3
MD17G1046800 Malus domestica HOM05D001960 ORTHO05D007725 1.3e-205 719.9 489 72.4
Eucgr.J02136 Eucalyptus grandis HOM05D001960 ORTHO05D007725 2.8e-205 718.8 502 71.7
THA.LOC104823928 Tarenaya hassleriana HOM05D001960 ORTHO05D007725 6.3e-205 717.6 478 72.8
arahy.Tifrunner.gnm1.ann1.9ZMQ3R Arachis hypogaea HOM05D001960 ORTHO05D007725 3.1e-204 715.3 495 71.3
arahy.Tifrunner.gnm1.ann1.57V2RC Arachis hypogaea HOM05D001960 ORTHO05D007725 7.0e-204 714.1 489 71.2
GSVIVG01032604001 Vitis vinifera HOM05D001960 ORTHO05D007725 7.0e-204 714.1 489 74.0
Nn3g17123 Nelumbo nucifera HOM05D001960 ORTHO05D007725 2.0e-203 712.6 465 74.6
ClCG09G018410 Citrullus lanatus HOM05D001960 ORTHO05D007725 1.0e-202 710.3 490 71.0
FAN05G4054 Fragaria x ananassa HOM05D001960 ORTHO05D007725 5.0e-202 708.0 492 72.2
Thhalv10004119m.g Eutrema salsugineum HOM05D001960 ORTHO05D007725 8.5e-202 707.2 483 71.2
Lsat_1_v5_gn_4_179920 Lactuca sativa HOM05D001960 ORTHO05D007725 1.5e-201 706.4 488 71.9
VMungo1127G2029 Vigna mungo HOM05D001960 ORTHO05D007725 1.5e-201 706.4 457 73.3
CARHR286600 Cardamine hirsuta HOM05D001960 ORTHO05D007725 1.9e-201 706.1 483 71.2
PGR083G0481 Punica granatum HOM05D001960 ORTHO05D007725 4.2e-201 704.9 492 72.2
Sed0013706 Sechium edule HOM05D001960 ORTHO05D007725 5.5e-201 704.5 498 70.7
Carub.0005s0723 Capsella rubella HOM05D001960 ORTHO05D007725 7.2e-201 704.1 481 71.7
Medtr4g075200 Medicago truncatula HOM05D001960 ORTHO05D007725 7.2e-201 704.1 426 77.7
Phvul.011G027550 Phaseolus vulgaris HOM05D001960 ORTHO05D007725 7.2e-201 704.1 457 74.0
Glyma.11G099200 Glycine max HOM05D001960 ORTHO05D007725 1.2e-200 703.4 433 77.1
BcaC06g30901 Brassica carinata HOM05D001960 ORTHO05D007725 2.1e-200 702.6 486 68.9
TPR.G17186 Trifolium pratense HOM05D001960 ORTHO05D007725 2.1e-200 702.6 442 75.3
FvH4_6g49351 Fragaria vesca HOM05D001960 ORTHO05D007725 3.6e-200 701.8 426 78.2
Sed0024340 Sechium edule HOM05D001960 ORTHO05D007725 4.7e-200 701.4 476 71.6
Lj3g0011182 Lotus japonicus HOM05D001960 ORTHO05D007725 6.1e-200 701.0 427 77.0
Sp2g17340 Schrenkiella parvula HOM05D001960 ORTHO05D007725 1.4e-199 699.9 486 70.6
Psat7g177520 Pisum sativum HOM05D001960 ORTHO05D007725 2.3e-199 699.1 425 76.5
HanXRQChr09g0265611 Helianthus annuus HOM05D001960 ORTHO05D007725 4.0e-199 698.4 487 70.8
BcaC06g33634 Brassica carinata HOM05D001960 ORTHO05D007725 5.2e-199 698.0 481 70.1
C07p37650 Brassica napus HOM05D001960 ORTHO05D004348 8.8e-199 697.2 480 70.2
BolC7t44281H Brassica oleracea HOM05D001960 ORTHO05D007725 8.8e-199 697.2 480 70.2
Ca_20945_v3 Cicer arietinum L. HOM05D001960 ORTHO05D007725 2.0e-198 696.0 426 77.5
Sc10g0003830 Simmondsia chinensis HOM05D001960 ORTHO05D007725 2.6e-198 695.7 470 72.6
Hund13245 Selenicereus undatus HOM05D001960 ORTHO05D007725 5.7e-198 694.5 476 72.1
AT3G28700 Arabidopsis thaliana HOM05D001960 ORTHO05D007725 7.5e-198 694.1 481 70.7
AL5G18340 Arabidopsis lyrata HOM05D001960 ORTHO05D007725 9.7e-198 693.7 482 70.5
A06p40400 Brassica napus HOM05D001960 ORTHO05D004348 4.8e-197 691.4 481 69.9
BraA06t26958Z Brassica rapa HOM05D001960 ORTHO05D004348 4.8e-197 691.4 481 69.9
AUR62031644 Chenopodium quinoa HOM05D001960 ORTHO05D007725 1.4e-196 689.9 446 73.8
Ca_19010_v3 Cicer arietinum L. HOM05D001960 ORTHO05D007725 1.2e-195 686.8 424 76.2
AUR62038879 Chenopodium quinoa HOM05D001960 ORTHO05D007725 1.0e-194 683.7 462 71.6
Lalb_Chr19g0139461 Lupinus albus HOM05D001960 ORTHO05D007725 1.0e-194 683.7 456 72.6
Os01g0588800 Oryza sativa ssp. japonica HOM05D001960 ORTHO05D007725 1.3e-194 683.3 432 75.9
PSO832G0234 Papaver somniferum HOM05D001960 ORTHO05D007725 1.5e-193 679.9 496 68.1
Lj7A401T79 Lonicera japonica HOM05D001960 ORTHO05D007725 3.2e-193 678.7 445 73.5
FAN14G4702 Fragaria x ananassa HOM05D001960 ORTHO05D007725 8.0e-192 674.1 404 78.5
MBI15_g37231_MAGBIO Magnolia biondii HOM05D001960 ORTHO05D007725 1.0e-191 673.7 447 73.6
EL10Ac2g03435 Beta vulgaris HOM05D001960 ORTHO05D007725 1.8e-191 672.9 488 69.3
Aa31LG2G4510 Aethionema arabicum HOM05D001960 ORTHO05D007725 1.2e-190 670.2 434 74.2
Aqoxy3G03264 Aquilegia oxysepala HOM05D001960 ORTHO05D007725 5.9e-187 657.9 402 77.9
CSS0006137 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D007725 3.3e-185 652.1 378 81.5
Gohir.A05G364200 Gossypium hirsutum HOM05D001960 ORTHO05D007725 2.8e-184 649.0 406 75.4
FAN02G2179 Fragaria x ananassa HOM05D001960 ORTHO05D007725 4.7e-184 648.3 541 62.7
vmacro05739 Vaccinium macrocarpon HOM05D001960 ORTHO05D007725 3.4e-182 642.1 473 70.0
HPP92_022934 Vanilla planifolia HOM05D001960 ORTHO05D007725 7.5e-182 641.0 462 68.0
ATR1120G150 Amborella trichopoda HOM05D001960 ORTHO05D007725 2.0e-179 632.9 491 65.0
COL.COLO4_25201 Corchorus olitorius HOM05D001960 ORTHO05D007725 5.9e-179 631.3 486 67.5
ECA232G3528 Erigeron canadensis HOM05D001960 ORTHO05D007725 1.3e-178 630.2 378 79.1
Zm00001eb357440 Zea mays HOM05D001960 ORTHO05D007725 8.6e-178 627.5 424 71.9
HPP92_022922 Vanilla planifolia HOM05D001960 ORTHO05D007725 1.3e-173 613.6 411 71.5
unitig_747.g21836 Utricularia gibba HOM05D001960 ORTHO05D007725 7.0e-172 607.8 494 63.6
C09p03940 Brassica napus HOM05D001960 ORTHO05D007725 1.2e-171 607.1 436 66.3
BolC9t53325H Brassica oleracea HOM05D001960 ORTHO05D007725 2.5e-169 599.4 471 63.7
PSO591G0496 Papaver somniferum HOM05D001960 ORTHO05D007725 3.6e-168 595.5 442 67.0
Ah.12g065370 Amaranthus hybridus HOM05D001960 ORTHO05D007725 6.2e-168 594.7 394 71.8
Peaxi162Scf00129g00533 Petunia axillaris HOM05D001960 ORTHO05D007725 5.2e-167 591.7 391 73.4
SEGI_03019 Sequoiadendron giganteum HOM05D001960 ORTHO05D007725 5.2e-167 591.7 444 64.2
Dinv33716 Davidia involucrata HOM05D001960 ORTHO05D007725 7.1e-164 581.3 341 80.1
ECA232G0063 Erigeron canadensis HOM05D001960 ORTHO05D007725 2.3e-162 576.2 378 74.1
Pp3c8_16780 Physcomitrium patens HOM05D001960 ORTHO05D007725 6.8e-159 564.7 502 57.2
BcaC04g23865 Brassica carinata HOM05D001960 ORTHO05D004348 5.6e-153 545.0 411 65.2
CDE05G2812 Ceratophyllum demersum HOM05D001960 ORTHO05D007725 2.9e-149 532.7 347 74.4
Mapoly0027s0012 Marchantia polymorpha HOM05D001960 ORTHO05D007725 4.9e-149 531.9 486 55.6
Dinv34989 Davidia involucrata HOM05D001960 ORTHO05D007725 6.2e-144 515.0 327 77.1
AagrBONN_evm.TU.Sc2ySwM_368.2217 Anthoceros agrestis HOM05D001960 ORTHO05D007725 1.1e-140 504.2 465 54.4
Hma1.2p1_1232F.1_g268890 Hydrangea macrophylla HOM05D001960 ORTHO05D007725 1.1e-121 441.0 256 80.5
SMO200G0063 Selaginella moellendorffii HOM05D001960 ORTHO05D007725 2.9e-117 426.4 391 54.7
C04p40510 Brassica napus HOM05D001960 ORTHO05D007725 1.5e-113 414.1 297 68.0
BolC4t25631H Brassica oleracea HOM05D001960 ORTHO05D007725 1.5e-113 414.1 297 68.0
Ca_19017_v3 Cicer arietinum L. HOM05D000077 ORTHO05D002511 2.2e-109 400.2 349 58.7
C05p44890 Brassica napus HOM05D001960 ORTHO05D007725 6.3e-104 382.1 294 64.6
BolC8t50105H Brassica oleracea HOM05D001960 ORTHO05D007725 1.9e-100 370.5 282 65.2
C08p31240 Brassica napus HOM05D001960 ORTHO05D007725 7.9e-99 365.2 285 63.9
C08p24890 Brassica napus HOM05D001960 ORTHO05D007725 1.8e-98 364.0 306 60.8
BcaC02g09250 Brassica carinata HOM05D001960 ORTHO05D007725 9.7e-97 358.2 264 66.7
Migut.K01334 Erythranthe guttata HOM05D001960 ORTHO05D007725 1.8e-95 354.0 229 78.2
MCO09G443 Micromonas commoda HOM05D001960 ORTHO05D007725 1.5e-89 334.3 383 45.2
HPP92_022944 Vanilla planifolia HOM05D001960 ORTHO05D007725 1.0e-82 311.6 209 72.7
CBR_g40650 Chara braunii HOM05D001960 ORTHO05D007725 3.5e-78 296.6 335 45.1
SHI22231 Sapria himalayana HOM05D001960 ORTHO05D007725 1.3e-69 268.1 249 55.4
Cre02.g096400 Chlamydomonas reinhardtii HOM05D001960 ORTHO05D007725 2.1e-67 260.8 566 31.4
Cfa026330 Carpinus fangiana HOM05D001960 ORTHO05D007725 4.9e-48 196.4 470 32.3
Dinv34987 Davidia involucrata HOM05D001960 ORTHO05D007725 5.1e-45 186.4 107 83.2
Actinidia23575 Actinidia chinensis HOM05D001960 ORTHO05D007725 6.4e-40 169.5 112 72.3
Hma1.2p1_1232F.1_g268870 Hydrangea macrophylla HOM05D001960 ORTHO05D014729 1.2e-38 165.2 150 60.7
AUR62031616 Chenopodium quinoa HOM05D000372 ORTHO05D002769 1.0e-29 135.6 97 63.9
Dinv06509 Davidia involucrata HOM05D001960 ORTHO05D014729 5.1e-29 133.3 84 75.0
A05p31150 Brassica napus HOM05D001960 ORTHO05D033473 1.1e-20 105.5 66 75.8
CDE05G0334 Ceratophyllum demersum HOM05D000115 ORTHO05D000645 7.4e-20 102.8 59 74.6
Oeu056605.1 Olea europaea HOM05D001875 ORTHO05D002019 1.2e-17 95.5 57 86.0
A01p26160 Brassica napus HOM05D001960 ORTHO05D014930 2.0e-17 94.7 68 64.7
C04p14730 Brassica napus HOM05D001960 ORTHO05D014930 2.0e-17 94.7 68 64.7
BraA02t06070Z Brassica rapa HOM05D001960 ORTHO05D014930 2.0e-17 94.7 68 64.7
BcaC02g11495 Brassica carinata HOM05D001960 ORTHO05D014930 3.4e-17 94.0 67 65.7
BolC3t20150H Brassica oleracea HOM05D001960 ORTHO05D014930 3.4e-17 94.0 68 64.7
BraA05t21956Z Brassica rapa HOM05D001960 ORTHO05D042754 4.5e-17 93.6 91 51.6
C07p16020 Brassica napus HOM05D001960 ORTHO05D014930 1.3e-16 92.0 69 62.3
BolC5t33816H Brassica oleracea HOM05D001960 ORTHO05D014930 1.7e-16 91.7 68 61.8
HPP92_017638 Vanilla planifolia HOM05D003031 ORTHO05D003371 1.7e-16 91.7 53 71.7
BcaC05g28941 Brassica carinata HOM05D001960 ORTHO05D014930 2.9e-16 90.9 67 62.7
C07p16060 Brassica napus HOM05D001960 ORTHO05D021151 2.9e-16 90.9 68 61.8
A05p31140 Brassica napus HOM05D001960 ORTHO05D042754 4.9e-16 90.1 68 63.2
HPP92_003669 Vanilla planifolia HOM05D001960 ORTHO05D007725 2.7e-14 84.3 69 63.8
Actinidia27488 Actinidia chinensis HOM05D001960 ORTHO05D058277 2.4e-10 71.2 63 60.3
Medtr5g075800 Medicago truncatula HOM05D001960 ORTHO05D258834 2.6e-09 67.8 83 47.0
Dinv25076 Davidia involucrata HOM05D001960 ORTHO05D033473 1.3e-08 65.5 43 72.1
GSVIVG01021633001 Vitis vinifera HOM05D001960 ORTHO05D439898 1.2e-06 58.9 43 62.8


User provided reference genes

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