Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 3.3e-98 361.7 178 100.0
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 1.8e-51 206.5 174 59.2
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 9.0e-48 194.1 174 55.7
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 1.5e-18 97.1 174 36.2
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 1.3e-14 84.0 144 33.3
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 1.7e-14 83.6 175 32.0
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 2.2e-14 83.2 167 32.9
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 2.9e-14 82.8 161 33.5
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.9e-13 80.1 163 30.1
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 3.2e-13 79.3 165 30.3
Solyc08g016120.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 3.2e-13 79.3 175 30.3
Solyc08g016100.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 4.2e-13 79.0 175 30.3
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 5.5e-13 78.6 161 32.3
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 7.2e-13 78.2 149 33.6
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 7.2e-13 78.2 160 33.1
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 3.6e-12 75.9 175 28.6
Solyc08g016110.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 6.1e-12 75.1 175 29.7
PGSC0003DMG400003969 Solanum tuberosum HOM05D009933 ORTHO05D012084 1.4e-11 73.9 175 29.1
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.3e-11 73.2 175 29.1
PGSC0003DMG400003994 Solanum tuberosum HOM05D009933 ORTHO05D012084 2.3e-11 73.2 160 32.5
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 3.9e-11 72.4 140 30.7
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 5.2e-11 72.0 161 29.8
Solyc04g015510.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 5.2e-11 72.0 160 30.6
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 8.8e-11 71.2 144 30.6
Nitab4.5_0002441g0060 Nicotiana tabacum HOM05D009933 ORTHO05D012084 7.4e-10 68.2 127 32.3
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 2.8e-09 66.2 142 31.7
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 6.3e-09 65.1 149 26.8
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 8.2e-09 64.7 164 28.7
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 1.4e-08 63.9 166 25.9
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.4e-08 63.9 170 29.4
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 1.8e-08 63.5 168 26.2
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 3.1e-08 62.8 169 27.2
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.1e-08 62.8 170 27.1
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 4.1e-08 62.4 152 25.7
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 5.3e-08 62.0 168 23.8
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 7.0e-08 61.6 153 25.5
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 7.0e-08 61.6 179 25.7
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 7.0e-08 61.6 179 25.7
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 1.2e-07 60.8 117 35.0
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 1.6e-07 60.5 174 26.4
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.6e-07 60.5 174 26.4
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 2.0e-07 60.1 162 25.9
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 2.0e-07 60.1 163 23.3
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 2.0e-07 60.1 129 25.6
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 2.6e-07 59.7 167 26.9
Lalb_Chr12g0200791 Lupinus albus HOM05D001578 ORTHO05D001207 2.6e-07 59.7 173 24.3
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 3.5e-07 59.3 158 24.7
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 5.9e-07 58.5 166 28.3
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 5.9e-07 58.5 157 26.8
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 5.9e-07 58.5 129 30.2
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 1.0e-06 57.8 151 25.2
Medtr4g122720 Medicago truncatula HOM05D001578 ORTHO05D001207 1.3e-06 57.4 139 26.6
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 1.7e-06 57.0 178 27.5
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 1.7e-06 57.0 164 21.3
TPR.G25390 Trifolium pratense HOM05D001578 ORTHO05D001207 2.2e-06 56.6 158 24.1
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 3.8e-06 55.8 160 23.8
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 6.5e-06 55.1 166 24.1
Psat4g021720 Pisum sativum HOM05D001578 ORTHO05D001207 6.5e-06 55.1 165 21.8
Sc02g0000800 Simmondsia chinensis HOM05D009933 ORTHO05D012084 6.5e-06 55.1 174 27.0
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 8.5e-06 54.7 165 24.2


User provided reference genes

Program Settings