Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060841.3 Olea europaea HOM05D004408 ORTHO05D005486 2.7e-272 941.4 489 100.0
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 2.4e-196 689.1 447 81.0
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 4.8e-192 674.9 447 79.9
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 3.2e-188 662.1 447 78.1
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 1.2e-187 660.2 453 78.6
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 3.5e-187 658.7 453 78.4
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 3.5e-187 658.7 447 77.4
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 1.3e-186 656.8 487 73.3
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 9.6e-185 650.6 447 77.4
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 9.6e-185 650.6 461 74.8
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 1.6e-184 649.8 447 77.2
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 1.6e-184 649.8 447 77.4
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 2.1e-184 649.4 461 74.4
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 2.8e-184 649.0 447 77.4
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 3.7e-184 648.7 447 76.7
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 4.8e-184 648.3 506 70.0
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 8.2e-184 647.5 461 74.4
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 1.4e-183 646.7 447 76.1
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 2.4e-183 646.0 461 74.4
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 4.1e-183 645.2 445 76.6
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 5.3e-183 644.8 461 73.5
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 6.9e-183 644.4 447 76.1
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 9.0e-183 644.0 447 75.8
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 1.2e-182 643.7 461 74.4
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 1.2e-182 643.7 447 76.3
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 5.8e-182 641.3 447 75.2
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 1.7e-181 639.8 447 75.8
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 5.0e-181 638.3 447 75.8
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 5.0e-181 638.3 461 74.0
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 6.5e-181 637.9 447 76.1
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 6.5e-181 637.9 447 75.6
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 1.1e-180 637.1 447 76.3
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 1.4e-180 636.7 447 75.2
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 1.4e-180 636.7 447 75.6
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 1.4e-180 636.7 447 75.2
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 1.9e-180 636.3 447 75.2
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 3.2e-180 635.6 447 74.9
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 7.2e-180 634.4 450 75.3
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 9.3e-180 634.0 447 75.4
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 4.6e-179 631.7 447 75.6
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 6.1e-179 631.3 447 74.5
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 1.0e-178 630.6 483 71.2
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 2.3e-178 629.4 447 75.2
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 5.1e-178 628.2 447 75.8
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 8.7e-178 627.5 447 74.3
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 8.7e-178 627.5 445 75.7
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 1.9e-177 626.3 447 74.5
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 7.4e-177 624.4 448 74.8
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 9.7e-177 624.0 449 74.2
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 4.8e-176 621.7 451 75.2
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 8.2e-176 620.9 447 73.2
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.6e-174 615.9 447 74.9
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 3.4e-174 615.5 447 74.7
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 4.5e-174 615.1 447 73.6
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 1.7e-173 613.2 447 74.3
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 2.5e-172 609.4 438 75.1
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 1.2e-171 607.1 447 73.4
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.6e-171 605.1 447 74.0
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 3.3e-169 599.0 434 73.5
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 9.7e-169 597.4 447 72.3
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 3.7e-168 595.5 448 72.1
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 4.8e-168 595.1 447 70.9
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 3.1e-167 592.4 448 71.2
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 3.1e-167 592.4 448 71.2
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 4.1e-167 592.0 447 71.1
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 6.9e-167 591.3 447 70.9
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 9.1e-167 590.9 448 71.0
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 1.5e-166 590.1 447 71.1
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 2.0e-166 589.7 447 70.9
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 2.0e-166 589.7 507 64.9
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 2.6e-166 589.3 448 70.8
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 2.6e-166 589.3 448 71.0
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 1.0e-165 587.4 447 70.7
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 1.1e-164 583.9 448 69.9
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 1.9e-164 583.2 449 70.6
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 4.2e-164 582.0 448 69.9
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 4.2e-164 582.0 448 69.9
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 2.1e-163 579.7 452 69.5
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 6.1e-163 578.2 439 70.8
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 1.0e-162 577.4 448 69.4
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 3.3e-161 572.4 446 69.7
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 1.7e-160 570.1 447 68.2
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 1.2e-158 563.9 363 81.8
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 3.5e-158 562.4 447 69.4
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 4.4e-153 545.4 374 77.5
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 2.4e-151 539.7 611 55.5
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 1.2e-134 484.2 462 58.7
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 2.7e-134 483.0 546 54.9
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 3.6e-131 472.6 470 56.2
Psat6g147800 Pisum sativum HOM05D004408 ORTHO05D005486 4.4e-129 465.7 310 79.0
CDE10G0751 Ceratophyllum demersum HOM05D004408 ORTHO05D005486 5.7e-129 465.3 425 62.6
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 3.2e-127 459.5 446 55.4
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.7e-125 453.8 397 63.7
SMO169G0216 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 1.7e-125 453.8 449 55.0
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 9.5e-124 448.0 430 60.5
Nitab4.5_0000162g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 2.2e-120 436.8 294 78.2
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 3.7e-120 436.0 451 53.2
Pp3c17_790 Physcomitrium patens HOM05D004408 ORTHO05D005486 6.0e-110 402.1 444 51.1
CBR_g23067 Chara braunii HOM05D004408 ORTHO05D005486 1.2e-107 394.4 450 50.4
vmacro19680 Vaccinium macrocarpon HOM05D004408 ORTHO05D005486 8.6e-101 371.7 254 76.8
Nitab4.5_0000921g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 1.9e-95 354.0 237 78.9
Peaxi162Scf01827g00009 Petunia axillaris HOM05D004408 ORTHO05D005486 3.6e-83 313.2 252 68.7
Solyc09g018370.4 Solanum lycopersicum HOM05D004408 ORTHO05D005486 1.2e-78 298.1 190 81.1
Solyc09g018340.2 Solanum lycopersicum HOM05D004408 ORTHO05D005486 2.7e-78 297.0 211 74.4
Nitab4.5_0000921g0020 Nicotiana tabacum HOM05D004408 ORTHO05D005486 2.5e-76 290.4 204 75.5
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 3.2e-71 273.5 445 44.3
Lj7A478G81 Lonicera japonica HOM05D004408 ORTHO05D005486 3.0e-61 240.4 145 84.8
arahy.Tifrunner.gnm1.ann1.N9X86H Arachis hypogaea HOM05D004408 ORTHO05D005486 2.2e-59 234.2 145 80.0
Actinidia17457 Actinidia chinensis HOM05D004408 ORTHO05D005486 1.6e-54 218.0 176 68.2
SEGI_37886 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 4.2e-47 193.4 146 65.8
Nitab4.5_0000162g0020 Nicotiana tabacum HOM05D004408 ORTHO05D005486 7.2e-47 192.6 137 73.7
SEGI_11157 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 3.0e-45 187.2 116 79.3
arahy.Tifrunner.gnm1.ann1.6Q424B Arachis hypogaea HOM05D004408 ORTHO05D005486 2.2e-35 154.5 132 63.6
arahy.Tifrunner.gnm1.ann1.QABH9B Arachis hypogaea HOM05D004408 ORTHO05D005486 3.7e-35 153.7 98 82.7
Cpa.g.sc117.53 Carica papaya HOM05D004408 ORTHO05D005486 1.2e-33 148.7 95 74.7
SEGI_41322 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 4.5e-33 146.7 134 62.7
PRCOL_00003187 Prasinoderma coloniale HOM05D004408 ORTHO05D005486 1.1e-31 142.1 367 31.9
Psat6g147640 Pisum sativum HOM05D004408 ORTHO05D005486 6.1e-22 109.8 92 62.0
Cpa.g.sc117.56 Carica papaya HOM05D004408 ORTHO05D005486 2.4e-18 97.8 211 36.0
arahy.Tifrunner.gnm1.ann1.L7F5GT Arachis hypogaea HOM05D004408 ORTHO05D005486 1.0e-16 92.4 54 85.2
Zm00001eb151860 Zea mays HOM05D004408 ORTHO05D005486 1.9e-15 88.2 73 61.6
arahy.Tifrunner.gnm1.ann1.T4B9X4 Arachis hypogaea HOM05D004408 ORTHO05D005486 4.9e-11 73.6 47 80.9
SMO116G0400 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 2.7e-09 67.8 59 61.0
Psat6g147760 Pisum sativum HOM05D004408 ORTHO05D005486 3.6e-06 57.4 54 61.1


User provided reference genes

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