Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060796.1 Olea europaea HOM05D008788 ORTHO05D012497 2.6e-133 478.8 254 100.0
Migut.D01837 Erythranthe guttata HOM05D008788 ORTHO05D012497 6.9e-25 118.6 271 35.1
Cc04_g17010 Coffea canephora HOM05D008788 ORTHO05D012497 1.9e-22 110.5 281 33.1
Nitab4.5_0000026g0150 Nicotiana tabacum HOM05D008788 ORTHO05D012497 2.3e-20 103.6 190 36.8
Hma1.2p1_0104F.1_g050070 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 3.1e-17 93.2 236 35.6
Hma1.2p1_0104F.1_g050076 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 3.1e-17 93.2 236 35.6
Nitab4.5_0000785g0060 Nicotiana tabacum HOM05D008788 ORTHO05D012497 3.1e-17 93.2 237 34.2
Cc04_g16990 Coffea canephora HOM05D008788 ORTHO05D012497 6.9e-17 92.0 284 34.2
Solyc03g112960.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 2.0e-16 90.5 269 32.0
Sopen03g032030 Solanum pennellii HOM05D008788 ORTHO05D012497 7.6e-16 88.6 269 32.0
PGSC0003DMG400018146 Solanum tuberosum HOM05D008788 ORTHO05D012497 7.6e-16 88.6 275 32.7
Lsat_1_v5_gn_5_18821 Lactuca sativa HOM05D000036 ORTHO05D009440 4.9e-15 85.9 219 32.0
TAR624G0531 Trochodendron aralioides HOM05D000036 ORTHO05D002265 6.4e-15 85.5 227 33.9
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 8.4e-15 85.1 266 33.5
Potri.003G123500 Populus trichocarpa HOM05D000281 ORTHO05D009440 1.4e-14 84.3 231 34.2
Potri.001G108200 Populus trichocarpa HOM05D000281 ORTHO05D009440 2.4e-14 83.6 228 35.5
Hma1.2p1_0735F.1_g210420 Hydrangea macrophylla HOM05D000281 ORTHO05D009440 3.2e-14 83.2 210 31.9
Sopen03g032040 Solanum pennellii HOM05D008788 ORTHO05D012497 3.2e-14 83.2 262 31.3
Haze_07345 Corylus avellana HOM05D000281 ORTHO05D009440 7.1e-14 82.0 222 32.4
TWI81G0565 Tripterygium wilfordii HOM05D000281 ORTHO05D009440 1.6e-13 80.9 232 32.3
Nitab4.5_0000741g0040 Nicotiana tabacum HOM05D008788 ORTHO05D012497 2.7e-13 80.1 242 30.6
Solyc03g112970.1 Solanum lycopersicum HOM05D008788 ORTHO05D012497 2.7e-13 80.1 262 30.5
Nitab4.5_0000984g0100 Nicotiana tabacum HOM05D008788 ORTHO05D012497 6.0e-13 79.0 262 28.2
TAR626G1978 Trochodendron aralioides HOM05D000036 ORTHO05D002265 7.9e-13 78.6 227 31.3
Sabra03G0087100 Salix brachista HOM05D000281 ORTHO05D009440 1.0e-12 78.2 223 33.2
Sabra01G0081700 Salix brachista HOM05D000281 ORTHO05D009440 1.8e-12 77.4 227 31.7
HanXRQChr08g0235691 Helianthus annuus HOM05D000036 ORTHO05D009440 2.3e-12 77.0 217 31.3
TPR.G11947 Trifolium pratense HOM05D000036 ORTHO05D009440 3.0e-12 76.6 220 32.3
Dinv19941 Davidia involucrata HOM05D000036 ORTHO05D009440 3.9e-12 76.3 147 39.5
HanXRQChr08g0235671 Helianthus annuus HOM05D000036 ORTHO05D009440 5.1e-12 75.9 217 29.0
Manes.14G076700 Manihot esculenta HOM05D000281 ORTHO05D009440 6.7e-12 75.5 206 33.5
Cfa018963 Carpinus fangiana HOM05D000281 ORTHO05D009440 1.9e-11 73.9 220 31.8
Lj5C112G10 Lonicera japonica HOM05D000036 ORTHO05D009440 2.5e-11 73.6 154 37.7
RcHm_v2.0_Chr7g0180951 Rosa chinensis HOM05D000281 ORTHO05D009440 3.3e-11 73.2 201 32.3
ECA234G1515 Erigeron canadensis HOM05D000036 ORTHO05D009440 4.3e-11 72.8 215 30.2
Duzib168G1886 Durio zibethinus HOM05D000036 ORTHO05D002265 5.6e-11 72.4 228 28.5
Peaxi162Scf00267g00131 Petunia axillaris HOM05D008788 ORTHO05D012497 5.6e-11 72.4 262 29.0
RcHm_v2.0_Chr2g0147861 Rosa chinensis HOM05D000036 ORTHO05D002265 7.4e-11 72.0 225 31.1
FAN02G4144 Fragaria x ananassa HOM05D000036 ORTHO05D002265 9.6e-11 71.6 201 31.8
FAN05G2733 Fragaria x ananassa HOM05D000036 ORTHO05D002265 9.6e-11 71.6 201 31.8
Sabra01G0130000 Salix brachista HOM05D000036 ORTHO05D002265 2.1e-10 70.5 172 31.4
Hma1.2p1_0229F.1_g097090 Hydrangea macrophylla HOM05D000036 ORTHO05D002265 3.6e-10 69.7 196 32.1
Prupe.3G031000 Prunus persica HOM05D000036 ORTHO05D000095 3.6e-10 69.7 232 31.5
Aqoxy7G04183 Aquilegia oxysepala HOM05D000036 ORTHO05D002265 6.2e-10 68.9 186 28.5
arahy.Tifrunner.gnm1.ann1.L3JBZI Arachis hypogaea HOM05D000036 ORTHO05D002265 6.2e-10 68.9 178 30.3
Ca_23446_v3 Cicer arietinum L. HOM05D000036 ORTHO05D002265 6.2e-10 68.9 184 29.9
Aqoxy2G00650 Aquilegia oxysepala HOM05D000036 ORTHO05D009440 8.1e-10 68.6 177 29.9
MELO3C001969.2 Cucumis melo HOM05D000281 ORTHO05D009440 8.1e-10 68.6 201 27.9
Lj5C29T4 Lonicera japonica HOM05D000036 ORTHO05D002265 8.1e-10 68.6 226 31.4
Atru.chr9.2281 Acer truncatum HOM05D000281 ORTHO05D009440 1.4e-09 67.8 165 34.5
arahy.Tifrunner.gnm1.ann1.CZ3KL5 Arachis hypogaea HOM05D000036 ORTHO05D002265 1.4e-09 67.8 181 30.4
Sed0006981 Sechium edule HOM05D000281 ORTHO05D009440 1.4e-09 67.8 209 29.7
FvH4_6g35820 Fragaria vesca HOM05D000036 ORTHO05D002265 1.8e-09 67.4 202 31.2
FAN09G4552 Fragaria x ananassa HOM05D000036 ORTHO05D002265 1.8e-09 67.4 202 31.2
FAN14G2322 Fragaria x ananassa HOM05D000036 ORTHO05D002265 1.8e-09 67.4 202 31.2
BcaC08g43560 Brassica carinata HOM05D000036 ORTHO05D002265 2.4e-09 67.0 243 28.4
COL.COLO4_21192 Corchorus olitorius HOM05D000036 ORTHO05D002265 3.1e-09 66.6 229 27.5
Thecc.09G068800 Theobroma cacao HOM05D000036 ORTHO05D002265 3.1e-09 66.6 236 28.8
vmacro18768 Vaccinium macrocarpon HOM05D000036 ORTHO05D002265 3.1e-09 66.6 143 34.3
Nn6g35732 Nelumbo nucifera HOM05D000036 ORTHO05D002265 5.3e-09 65.9 220 30.0
BolC6t36710H Brassica oleracea HOM05D000036 ORTHO05D002265 6.9e-09 65.5 222 27.5
FAN14G0632 Fragaria x ananassa HOM05D000036 ORTHO05D002265 6.9e-09 65.5 202 30.7
Sabra03G0043500 Salix brachista HOM05D000036 ORTHO05D002265 6.9e-09 65.5 172 30.8
COL.COLO4_30864 Corchorus olitorius HOM05D000036 ORTHO05D002265 9.0e-09 65.1 218 28.4
FAN02G2582 Fragaria x ananassa HOM05D000036 ORTHO05D000095 9.0e-09 65.1 203 31.5
Lj9C538G10 Lonicera japonica HOM05D000036 ORTHO05D002265 9.0e-09 65.1 196 29.6
THA.LOC104815596 Tarenaya hassleriana HOM05D000036 ORTHO05D002265 9.0e-09 65.1 175 29.7
Gorai.009G038900 Gossypium raimondii HOM05D000036 ORTHO05D002265 1.2e-08 64.7 189 30.2
Potri.001G162700 Populus trichocarpa HOM05D000036 ORTHO05D002265 1.2e-08 64.7 172 31.4
Sc10g0008020 Simmondsia chinensis HOM05D000036 ORTHO05D002265 1.2e-08 64.7 228 25.0
Aa31LG8G1570 Aethionema arabicum HOM05D000036 ORTHO05D000095 1.5e-08 64.3 144 32.6
ECA246G4295 Erigeron canadensis HOM05D000036 ORTHO05D009440 1.5e-08 64.3 203 29.1
Sp1g40330 Schrenkiella parvula HOM05D000036 ORTHO05D002265 1.5e-08 64.3 182 30.8
A05p17870 Brassica napus HOM05D000036 ORTHO05D002265 2.0e-08 63.9 222 27.5
BolC6t36033H Brassica oleracea HOM05D000036 ORTHO05D002265 2.0e-08 63.9 241 28.6
BraA05t20677Z Brassica rapa HOM05D000036 ORTHO05D002265 2.0e-08 63.9 222 27.5
Carub.0001s4312 Capsella rubella HOM05D000036 ORTHO05D002265 2.0e-08 63.9 215 26.5
Gohir.D05G038401 Gossypium hirsutum HOM05D000036 ORTHO05D000095 2.6e-08 63.5 189 30.2
Potri.003G072700 Populus trichocarpa HOM05D000036 ORTHO05D002265 2.6e-08 63.5 172 29.1
Sc04g0002530 Simmondsia chinensis HOM05D000281 ORTHO05D009440 2.6e-08 63.5 216 27.3
AL3G26620 Arabidopsis lyrata HOM05D000036 ORTHO05D002265 3.4e-08 63.2 220 27.7
AT1G53840 Arabidopsis thaliana HOM05D000036 ORTHO05D002265 3.4e-08 63.2 146 30.8
Duzib235G0550 Durio zibethinus HOM05D000036 ORTHO05D002265 3.4e-08 63.2 226 28.3
BcaC08g44138 Brassica carinata HOM05D000036 ORTHO05D002265 4.5e-08 62.8 222 27.0
C06p15380 Brassica napus HOM05D000036 ORTHO05D002265 4.5e-08 62.8 222 27.0
CsaV3_1G005300 Cucumis sativus L. HOM05D000281 ORTHO05D009440 4.5e-08 62.8 202 27.2
Gohir.A05G036900 Gossypium hirsutum HOM05D000036 ORTHO05D002265 4.5e-08 62.8 193 30.1
Nitab4.5_0000026g0140 Nicotiana tabacum HOM05D008788 ORTHO05D012497 4.5e-08 62.8 209 29.7
Aa31LG4G16400 Aethionema arabicum HOM05D000281 ORTHO05D009440 5.8e-08 62.4 187 28.3
Carub.0003s1400 Capsella rubella HOM05D000036 ORTHO05D002265 5.8e-08 62.4 167 29.9
COL.COLO4_30869 Corchorus olitorius HOM05D000036 ORTHO05D002265 5.8e-08 62.4 221 27.1
Psat4g165240 Pisum sativum HOM05D000036 ORTHO05D002265 5.8e-08 62.4 226 27.4
CARHR044170 Cardamine hirsuta HOM05D000036 ORTHO05D002265 7.6e-08 62.0 181 30.4
Cpa.g.sc25.193 Carica papaya HOM05D000036 ORTHO05D002265 7.6e-08 62.0 214 29.4
Thecc.06G130200 Theobroma cacao HOM05D000036 ORTHO05D002265 7.6e-08 62.0 165 30.9
Haze_16136 Corylus avellana HOM05D000036 ORTHO05D002265 9.9e-08 61.6 200 29.5
Thhalv10022003m.g Eutrema salsugineum HOM05D000036 ORTHO05D002265 1.3e-07 61.2 183 26.8
Gohir.D11G033600 Gossypium hirsutum HOM05D000281 ORTHO05D009440 1.3e-07 61.2 218 28.9
Cc04_g17040 Coffea canephora HOM05D008788 ORTHO05D017864 1.7e-07 60.8 306 27.5
BcaB02g10885 Brassica carinata HOM05D000036 ORTHO05D002265 2.2e-07 60.5 169 28.4
Gorai.007G036400 Gossypium raimondii HOM05D000281 ORTHO05D009440 2.2e-07 60.5 218 29.8
PGR102G1887 Punica granatum HOM05D000036 ORTHO05D002265 2.2e-07 60.5 199 29.6
MBI13_g01661_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D002265 2.9e-07 60.1 201 29.9
Rhsim08G0244700 Rhododendron simsii HOM05D000036 ORTHO05D002265 2.9e-07 60.1 146 33.6
AT3G14300 Arabidopsis thaliana HOM05D000036 ORTHO05D002265 3.8e-07 59.7 216 29.6
Nn8g38513 Nelumbo nucifera HOM05D000036 ORTHO05D009440 4.9e-07 59.3 173 30.6
BraA06t23309Z Brassica rapa HOM05D000036 ORTHO05D002265 6.4e-07 58.9 221 27.6
Glyma.16G014000 Glycine max HOM05D000036 ORTHO05D002265 6.4e-07 58.9 166 28.9
QL05p001219 Quercus lobata HOM05D000036 ORTHO05D002265 6.4e-07 58.9 182 32.4
CiPaw.01G211500 Carya illinoinensis HOM05D000036 ORTHO05D002265 8.4e-07 58.5 236 27.5
ECA232G2788 Erigeron canadensis HOM05D001342 ORTHO05D001286 1.1e-06 58.2 181 28.7
Oeu060793.1 Olea europaea HOM05D018110 ORTHO05D017864 1.1e-06 58.2 163 31.3
Gohir.A11G030341 Gossypium hirsutum HOM05D000281 ORTHO05D009440 1.4e-06 57.8 218 29.4
Peaxi162Scf00009g00113 Petunia axillaris HOM05D000281 ORTHO05D009440 1.4e-06 57.8 144 31.9
TWI59G0275 Tripterygium wilfordii HOM05D000036 ORTHO05D002265 1.4e-06 57.8 172 29.7
A06p00750 Brassica napus HOM05D000036 ORTHO05D002265 1.9e-06 57.4 221 27.1
C03p46880 Brassica napus HOM05D000036 ORTHO05D002265 1.9e-06 57.4 226 24.8
Cfa003461 Carpinus fangiana HOM05D000036 ORTHO05D000095 1.9e-06 57.4 200 29.0
Thhalv10011342m.g Eutrema salsugineum HOM05D000036 ORTHO05D002265 1.9e-06 57.4 169 29.6
HanXRQChr07g0189571 Helianthus annuus HOM05D000036 ORTHO05D002265 1.9e-06 57.4 121 30.6
arahy.Tifrunner.gnm1.ann1.F2KJAJ Arachis hypogaea HOM05D000036 ORTHO05D002265 2.4e-06 57.0 171 29.2
Hma1.2p1_0090F.1_g045840 Hydrangea macrophylla HOM05D000036 ORTHO05D002265 2.4e-06 57.0 175 26.3
BcaB05g23067 Brassica carinata HOM05D000281 ORTHO05D009440 3.2e-06 56.6 173 28.3
ATR0099G059 Amborella trichopoda HOM05D000036 ORTHO05D002265 4.2e-06 56.2 189 25.4
TPR.G8720 Trifolium pratense HOM05D000036 ORTHO05D002265 4.2e-06 56.2 162 29.6
ATR0099G099 Amborella trichopoda HOM05D000036 ORTHO05D002265 5.5e-06 55.8 166 25.3
ClCG04G012410 Citrullus lanatus HOM05D000036 ORTHO05D009440 5.5e-06 55.8 218 26.6
CAN.G1305.14 Capsicum annuum HOM05D008788 ORTHO05D012497 7.1e-06 55.5 251 27.1
Glyma.07G045967 Glycine max HOM05D000036 ORTHO05D002265 7.1e-06 55.5 168 29.2
CAN.G1673.12 Capsicum annuum HOM05D008788 ORTHO05D012497 9.3e-06 55.1 220 27.3
Ciclev10025232m.g Citrus clementina HOM05D000036 ORTHO05D002265 9.3e-06 55.1 228 27.6


User provided reference genes

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