Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060793.1 Olea europaea HOM05D018110 ORTHO05D017864 2.6e-186 655.2 329 100.0
Oeu060794.1 Olea europaea HOM05D018110 ORTHO05D017864 1.5e-27 127.9 188 41.0
Migut.D01838 Erythranthe guttata HOM05D018109 ORTHO05D017864 9.5e-19 98.6 171 38.0
unitig_46.g18467 Utricularia gibba HOM05D018109 ORTHO05D017864 3.4e-16 90.1 186 32.8
Migut.I00161 Erythranthe guttata HOM05D018110 ORTHO05D023791 2.4e-14 84.0 160 38.1
Migut.I00158 Erythranthe guttata HOM05D018110 ORTHO05D023791 3.2e-14 83.6 144 40.3
MD06G1191000 Malus domestica HOM05D000281 ORTHO05D009440 9.2e-14 82.0 161 31.1
Prupe.5G189700 Prunus persica HOM05D000281 ORTHO05D009440 1.2e-13 81.6 182 30.8
Hma1.2p1_0104F.1_g050070 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 3.5e-13 80.1 187 34.2
Hma1.2p1_0104F.1_g050076 Hydrangea macrophylla HOM05D000036 ORTHO05D009440 3.5e-13 80.1 187 34.2
Hma1.2p1_0735F.1_g210420 Hydrangea macrophylla HOM05D000281 ORTHO05D009440 6.0e-13 79.3 172 33.1
Potri.001G108200 Populus trichocarpa HOM05D000281 ORTHO05D009440 6.0e-13 79.3 185 28.6
Migut.D01839 Erythranthe guttata HOM05D018109 ORTHO05D017864 1.0e-12 78.6 172 32.6
RcHm_v2.0_Chr7g0180951 Rosa chinensis HOM05D000281 ORTHO05D009440 1.3e-12 78.2 187 26.2
Manes.14G076700 Manihot esculenta HOM05D000281 ORTHO05D009440 4.3e-11 73.2 194 29.4
HanXRQChr05g0158071 Helianthus annuus HOM05D000036 ORTHO05D009440 5.6e-11 72.8 174 31.6
Lsat_1_v5_gn_5_18821 Lactuca sativa HOM05D000036 ORTHO05D009440 5.6e-11 72.8 172 32.0
TWI81G0565 Tripterygium wilfordii HOM05D000281 ORTHO05D009440 7.3e-11 72.4 188 27.7
Cfa018963 Carpinus fangiana HOM05D000281 ORTHO05D009440 9.5e-11 72.0 155 29.7
PGSC0003DMG400018145 Solanum tuberosum HOM05D000281 ORTHO05D009440 2.8e-10 70.5 168 28.6
Haze_07345 Corylus avellana HOM05D000281 ORTHO05D009440 3.6e-10 70.1 158 29.7
Cc04_g17040 Coffea canephora HOM05D008788 ORTHO05D017864 6.2e-10 69.3 205 29.3
Migut.D01840 Erythranthe guttata HOM05D018109 ORTHO05D017864 1.1e-09 68.6 172 36.0
MSTRG.11389 Avicennia marina HOM05D018110 ORTHO05D023791 1.4e-09 68.2 164 31.7
FvH4_5g15211 Fragaria vesca HOM05D000281 ORTHO05D009440 1.4e-09 68.2 178 25.8
Dinv19941 Davidia involucrata HOM05D000036 ORTHO05D009440 4.0e-09 66.6 146 32.2
QL10p016430 Quercus lobata HOM05D000281 ORTHO05D009440 4.0e-09 66.6 167 28.1
Atru.chr9.2281 Acer truncatum HOM05D000281 ORTHO05D009440 5.2e-09 66.2 174 29.3
CSS0007314 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D002265 5.2e-09 66.2 167 27.5
CAN.G1305.14 Capsicum annuum HOM05D008788 ORTHO05D012497 5.2e-09 66.2 162 30.2
CiPaw.11G042300 Carya illinoinensis HOM05D000036 ORTHO05D009440 6.8e-09 65.9 158 31.6
MELO3C001969.2 Cucumis melo HOM05D000281 ORTHO05D009440 1.5e-08 64.7 162 25.9
Migut.I00160 Erythranthe guttata HOM05D018110 ORTHO05D023791 2.6e-08 63.9 119 40.3
Solyc03g112990.1 Solanum lycopersicum HOM05D000281 ORTHO05D009440 2.6e-08 63.9 168 27.4
TPR.G8720 Trifolium pratense HOM05D000036 ORTHO05D002265 2.6e-08 63.9 141 31.2
TAR624G0531 Trochodendron aralioides HOM05D000036 ORTHO05D002265 3.4e-08 63.5 189 24.9
ECA246G4295 Erigeron canadensis HOM05D000036 ORTHO05D009440 5.8e-08 62.8 183 26.8
Cfa003461 Carpinus fangiana HOM05D000036 ORTHO05D000095 7.5e-08 62.4 170 26.5
Sopen03g032050 Solanum pennellii HOM05D000281 ORTHO05D009440 7.5e-08 62.4 168 26.8
Lj1g0018042 Lotus japonicus HOM05D000281 ORTHO05D009440 1.3e-07 61.6 168 28.6
CSS0042964 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D002265 2.2e-07 60.8 148 27.7
Lj5C112G10 Lonicera japonica HOM05D000036 ORTHO05D009440 2.2e-07 60.8 158 31.6
Ciclev10022028m.g Citrus clementina HOM05D000036 ORTHO05D009440 4.9e-07 59.7 186 27.4
Haze_16136 Corylus avellana HOM05D000036 ORTHO05D002265 8.3e-07 58.9 170 25.3
Oeu060796.1 Olea europaea HOM05D008788 ORTHO05D012497 8.3e-07 58.9 163 31.3
FvH4_6g35820 Fragaria vesca HOM05D000036 ORTHO05D002265 1.1e-06 58.5 173 26.0
FAN09G4552 Fragaria x ananassa HOM05D000036 ORTHO05D002265 1.1e-06 58.5 173 26.0
FAN14G0632 Fragaria x ananassa HOM05D000036 ORTHO05D002265 1.1e-06 58.5 173 26.0
FAN14G2322 Fragaria x ananassa HOM05D000036 ORTHO05D002265 1.1e-06 58.5 173 26.0
Migut.I00162 Erythranthe guttata HOM05D000281 ORTHO05D009440 1.4e-06 58.2 167 26.9
TAR626G1978 Trochodendron aralioides HOM05D000036 ORTHO05D002265 1.9e-06 57.8 184 24.5
ECA234G1515 Erigeron canadensis HOM05D000036 ORTHO05D009440 2.4e-06 57.4 198 25.3
FAN02G2582 Fragaria x ananassa HOM05D000036 ORTHO05D000095 3.2e-06 57.0 173 25.4
FAN02G4144 Fragaria x ananassa HOM05D000036 ORTHO05D002265 3.2e-06 57.0 173 25.4
FAN05G2733 Fragaria x ananassa HOM05D000036 ORTHO05D002265 3.2e-06 57.0 173 25.4
RcHm_v2.0_Chr2g0147861 Rosa chinensis HOM05D000036 ORTHO05D002265 4.1e-06 56.6 167 24.6
THA.LOC104819444 Tarenaya hassleriana HOM05D000036 ORTHO05D009440 9.2e-06 55.5 170 27.1


User provided reference genes

Program Settings