Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 9.8e-192 673.3 345 100.0
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 4.5e-144 515.0 352 79.0
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 3.1e-68 263.1 385 47.8
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 7.8e-64 248.4 385 47.3
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 4.1e-57 226.1 372 40.9
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 1.5e-54 217.6 367 42.5
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 1.9e-54 217.2 359 44.8
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 3.1e-52 209.9 361 42.7
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.4e-51 206.1 367 42.0
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 1.3e-50 204.5 366 41.8
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.7e-50 204.1 491 34.8
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 2.9e-50 203.4 377 41.4
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 5.4e-49 199.1 369 40.7
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 5.4e-49 199.1 377 38.7
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.6e-48 197.6 369 41.2
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 2.1e-48 197.2 377 40.1
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 3.5e-48 196.4 372 41.7
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.3e-47 194.5 366 41.3
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 1.3e-47 194.5 380 40.0
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 4.3e-46 189.5 371 39.9
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 4.3e-46 189.5 413 36.8
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 3.6e-45 186.4 371 40.2
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 8.1e-45 185.3 361 40.2
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 6.9e-44 182.2 361 39.3
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 1.2e-43 181.4 392 38.8
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.2e-43 181.4 362 39.0
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.5e-43 181.0 362 40.1
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 4.9e-42 176.0 293 44.0
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 4.9e-42 176.0 361 38.5
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 8.7e-39 165.2 296 39.9
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.1e-38 164.9 485 32.2
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 1.5e-38 164.5 336 39.6
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 4.3e-38 162.9 404 35.1
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 1.6e-37 161.0 408 34.6
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 2.8e-37 160.2 481 31.0
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 2.8e-37 160.2 368 35.6
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 1.1e-36 158.3 359 34.8
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 9.9e-35 151.8 341 33.7
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 1.4e-33 147.9 372 36.0
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 3.2e-33 146.7 333 35.4
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 7.9e-32 142.1 262 39.3
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 1.5e-30 137.9 316 33.2
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 2.8e-29 133.7 422 32.0
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 4.8e-29 132.9 422 31.5
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 4.8e-29 132.9 401 32.9
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 6.2e-29 132.5 429 29.6
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 6.2e-29 132.5 351 35.3
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 8.1e-29 132.1 405 31.9
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 1.4e-28 131.3 270 37.4
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 3.1e-28 130.2 386 32.9
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.6e-27 127.1 398 32.9
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 7.6e-27 125.6 262 39.3
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 7.6e-27 125.6 370 30.0
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.4e-25 121.3 333 31.5
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 4.2e-25 119.8 267 37.8
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 2.1e-24 117.5 349 31.8
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 2.7e-24 117.1 415 32.3
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 1.3e-21 108.2 343 29.7
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 2.1e-21 107.5 249 37.3
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 8.2e-21 105.5 335 31.0
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 8.2e-21 105.5 157 43.9
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.4e-20 104.8 403 29.0
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 1.4e-20 104.8 242 37.2
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 3.1e-20 103.6 357 31.4
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 9.0e-20 102.1 375 31.5
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 2.2e-18 97.4 245 33.5
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 7.1e-17 92.4 169 43.8
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 2.1e-16 90.9 459 26.6
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 4.6e-16 89.7 313 30.4
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 6.0e-16 89.4 188 41.0
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 1.3e-15 88.2 188 39.4
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 3.9e-15 86.7 232 35.8
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 4.3e-14 83.2 190 36.8
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.6e-13 81.3 364 28.0
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 8.2e-13 79.0 450 24.7
unitig_744.g24157 Utricularia gibba HOM05D007667 ORTHO05D008033 2.4e-12 77.4 191 35.1
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 1.2e-11 75.1 244 26.2
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 3.4e-11 73.6 69 55.1
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 1.3e-10 71.6 212 28.3
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.2e-10 70.9 154 37.7
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 3.8e-10 70.1 396 24.5
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 5.0e-10 69.7 405 24.0
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 1.9e-09 67.8 241 27.4
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 2.5e-09 67.4 241 28.2
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 2.5e-09 67.4 241 28.2
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 4.2e-09 66.6 390 24.9
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 5.5e-09 66.2 238 27.7
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 7.2e-09 65.9 362 26.8
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 7.2e-09 65.9 245 26.9
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 1.2e-08 65.1 195 32.8
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 2.1e-08 64.3 391 24.6
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 2.1e-08 64.3 391 24.6
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 2.7e-08 63.9 162 39.5
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 3.6e-08 63.5 257 26.5
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 4.6e-08 63.2 228 26.3
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 7.9e-08 62.4 258 26.4
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 7.9e-08 62.4 258 26.4
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 7.9e-08 62.4 95 40.0
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 7.9e-08 62.4 260 25.8
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 1.0e-07 62.0 93 45.2
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.0e-07 62.0 127 37.8
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 1.0e-07 62.0 88 45.5
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 1.4e-07 61.6 244 27.5
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 1.4e-07 61.6 245 27.8
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.4e-07 61.6 91 41.8
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.3e-07 60.8 92 43.5
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 2.3e-07 60.8 92 46.7
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 2.3e-07 60.8 242 26.9
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 3.0e-07 60.5 248 27.4
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 3.0e-07 60.5 247 27.9
FvH4_1g29470 Fragaria vesca HOM05D007667 ORTHO05D008033 1.9e-06 57.8 102 37.3
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 2.5e-06 57.4 255 26.3
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 3.3e-06 57.0 70 48.6
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 5.7e-06 56.2 76 38.2
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 7.4e-06 55.8 120 40.0


User provided reference genes

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