Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060728.1 Olea europaea HOM05D005695 ORTHO05D007810 1.4e-86 322.8 152 100.0
MSTRG.4989 Avicennia marina HOM05D005695 ORTHO05D007810 1.2e-27 127.1 74 75.7
SalBow4G2268 Salvia bowleyana HOM05D005695 ORTHO05D007810 2.6e-27 125.9 74 77.0
Cc05_g03930 Coffea canephora HOM05D005695 ORTHO05D007810 2.2e-26 122.9 73 76.7
CSS0020065 Camellia sinensis var. sinensis HOM05D005695 ORTHO05D007810 3.7e-26 122.1 104 58.7
HanXRQChr04g0117691 Helianthus annuus HOM05D005695 ORTHO05D007810 6.3e-26 121.3 76 76.3
TWI60G1156 Tripterygium wilfordii HOM05D005695 ORTHO05D007810 8.3e-26 120.9 76 72.4
CSS0010643 Camellia sinensis var. sinensis HOM05D005695 ORTHO05D007810 1.1e-25 120.6 74 74.3
vmacro21118 Vaccinium macrocarpon HOM05D005695 ORTHO05D007810 1.1e-25 120.6 130 50.0
Migut.N01667 Erythranthe guttata HOM05D005695 ORTHO05D007810 2.4e-25 119.4 74 66.2
CAN.G992.23 Capsicum annuum HOM05D005695 ORTHO05D007810 3.1e-25 119.0 73 71.2
MD02G1232000 Malus domestica HOM05D005695 ORTHO05D007810 3.1e-25 119.0 76 71.1
Ciclev10032172m.g Citrus clementina HOM05D005695 ORTHO05D007810 4.1e-25 118.6 74 74.3
DCAR_015741 Daucus carota HOM05D005695 ORTHO05D007810 7.0e-25 117.9 76 72.4
SGA_v2.0_scaffold4G02228 Striga asiatica HOM05D005695 ORTHO05D007810 7.0e-25 117.9 76 71.1
Manes.09G133400 Manihot esculenta HOM05D005695 ORTHO05D007810 9.1e-25 117.5 82 65.9
Peaxi162Scf00907g00028 Petunia axillaris HOM05D005695 ORTHO05D007810 9.1e-25 117.5 73 69.9
THA.LOC104820817 Tarenaya hassleriana HOM05D005695 ORTHO05D007810 9.1e-25 117.5 73 69.9
Sopen01g033020 Solanum pennellii HOM05D005695 ORTHO05D007810 1.2e-24 117.1 73 71.2
PGSC0003DMG400031121 Solanum tuberosum HOM05D005695 ORTHO05D007810 1.2e-24 117.1 73 69.9
ECA236G4408 Erigeron canadensis HOM05D005695 ORTHO05D007810 1.6e-24 116.7 76 71.1
CSS0017367 Camellia sinensis var. sinensis HOM05D005695 ORTHO05D007810 2.0e-24 116.3 74 70.3
Cfa003697 Carpinus fangiana HOM05D005695 ORTHO05D007810 2.0e-24 116.3 79 65.8
Rhsim03G0068300 Rhododendron simsii HOM05D005695 ORTHO05D007810 2.0e-24 116.3 104 56.7
RcHm_v2.0_Chr1g0340401 Rosa chinensis HOM05D005695 ORTHO05D007810 2.0e-24 116.3 75 70.7
Nitab4.5_0006785g0030 Nicotiana tabacum HOM05D005695 ORTHO05D007810 2.7e-24 115.9 73 68.5
Duzib177G0357 Durio zibethinus HOM05D005695 ORTHO05D007810 3.5e-24 115.5 73 69.9
CiPaw.02G047100 Carya illinoinensis HOM05D005695 ORTHO05D007810 4.5e-24 115.2 80 67.5
Solyc01g081460.3 Solanum lycopersicum HOM05D005695 ORTHO05D007810 4.5e-24 115.2 73 68.5
GSVIVG01019305001 Vitis vinifera HOM05D005695 ORTHO05D007810 7.7e-24 114.4 79 67.1
Haze_15789 Corylus avellana HOM05D005695 ORTHO05D007810 1.0e-23 114.0 79 65.8
Hma1.2p1_0128F.1_g060080 Hydrangea macrophylla HOM05D005695 ORTHO05D007810 1.3e-23 113.6 74 67.6
Hma1.2p1_0353F.1_g133140 Hydrangea macrophylla HOM05D005695 ORTHO05D007810 1.3e-23 113.6 73 68.5
Prupe.2G106600 Prunus persica HOM05D005695 ORTHO05D007810 1.3e-23 113.6 80 63.8
COL.COLO4_21416 Corchorus olitorius HOM05D005695 ORTHO05D007810 2.9e-23 112.5 69 76.8
Potri.013G070800 Populus trichocarpa HOM05D005695 ORTHO05D007810 2.9e-23 112.5 76 65.8
Nitab4.5_0000792g0190 Nicotiana tabacum HOM05D005695 ORTHO05D007810 3.8e-23 112.1 69 71.0
PGR083G0136 Punica granatum HOM05D005695 ORTHO05D007810 5.0e-23 111.7 74 67.6
RcHm_v2.0_Chr1g0340511 Rosa chinensis HOM05D005695 ORTHO05D007810 5.0e-23 111.7 79 63.3
Gohir.A11G224224 Gossypium hirsutum HOM05D005695 ORTHO05D007810 8.5e-23 110.9 74 67.6
Lj3g0016519 Lotus japonicus HOM05D005695 ORTHO05D007810 8.5e-23 110.9 103 54.4
RcHm_v2.0_Chr1g0340701 Rosa chinensis HOM05D005695 ORTHO05D007810 8.5e-23 110.9 80 63.8
MELO3C006212.2 Cucumis melo HOM05D005695 ORTHO05D007810 1.1e-22 110.5 73 69.9
arahy.Tifrunner.gnm1.ann1.HX5TFH Arachis hypogaea HOM05D005695 ORTHO05D007810 1.5e-22 110.2 74 66.2
Cpa.g.sc73.26 Carica papaya HOM05D005695 ORTHO05D007810 1.9e-22 109.8 74 68.9
Gorai.007G250100 Gossypium raimondii HOM05D005695 ORTHO05D007810 1.9e-22 109.8 74 67.6
Medtr8g009680 Medicago truncatula HOM05D005695 ORTHO05D007810 1.9e-22 109.8 74 63.5
Lsat_1_v5_gn_7_33441 Lactuca sativa HOM05D005695 ORTHO05D007810 2.5e-22 109.4 76 69.7
arahy.Tifrunner.gnm1.ann1.9M82AQ Arachis hypogaea HOM05D005695 ORTHO05D007810 3.2e-22 109.0 74 64.9
CsaV3_3G009910 Cucumis sativus L. HOM05D005695 ORTHO05D007810 3.2e-22 109.0 73 69.9
Psat4g216440 Pisum sativum HOM05D005695 ORTHO05D007810 3.2e-22 109.0 74 66.2
VMungo0331G0999 Vigna mungo HOM05D005695 ORTHO05D007810 4.2e-22 108.6 80 62.5
CANSAT54G1451 Cannabis sativa HOM05D005695 ORTHO05D007810 5.5e-22 108.2 73 65.8
Sed0004515 Sechium edule HOM05D005695 ORTHO05D007810 5.5e-22 108.2 73 65.8
Hund17169 Selenicereus undatus HOM05D005695 ORTHO05D007810 7.2e-22 107.8 76 65.8
TPR.G17373 Trifolium pratense HOM05D005695 ORTHO05D007810 7.2e-22 107.8 74 64.9
Glyma.03G100600 Glycine max HOM05D005695 ORTHO05D007810 9.5e-22 107.5 104 52.9
Nn7g37385 Nelumbo nucifera HOM05D005695 ORTHO05D007810 9.5e-22 107.5 74 64.9
Zm00001eb210200 Zea mays HOM05D005695 ORTHO05D007810 9.5e-22 107.5 79 64.6
CDE11G0447 Ceratophyllum demersum HOM05D005695 ORTHO05D007810 1.2e-21 107.1 76 63.2
FAN06G4316 Fragaria x ananassa HOM05D005695 ORTHO05D007810 1.2e-21 107.1 80 65.0
Lalb_Chr07g0194921 Lupinus albus HOM05D005695 ORTHO05D007810 1.2e-21 107.1 80 63.8
Sabra13G0061700 Salix brachista HOM05D005695 ORTHO05D007810 1.2e-21 107.1 76 64.5
ClCG05G002480 Citrullus lanatus HOM05D005695 ORTHO05D007810 1.6e-21 106.7 76 65.8
TAR715G0002 Trochodendron aralioides HOM05D005695 ORTHO05D007810 1.6e-21 106.7 74 67.6
Phvul.010G040100 Phaseolus vulgaris HOM05D005695 ORTHO05D007810 2.1e-21 106.3 79 63.3
Zm00001eb004570 Zea mays HOM05D005695 ORTHO05D007810 2.1e-21 106.3 79 63.3
AUR62038021 Chenopodium quinoa HOM05D005695 ORTHO05D007810 2.8e-21 105.9 73 67.1
Aqoxy3G02210 Aquilegia oxysepala HOM05D005695 ORTHO05D007810 3.6e-21 105.5 74 62.2
FvH4_7g08330 Fragaria vesca HOM05D005695 ORTHO05D007810 4.7e-21 105.1 80 63.8
Glyma.07G122300 Glycine max HOM05D005695 ORTHO05D007810 4.7e-21 105.1 79 62.0
FAN01G0968 Fragaria x ananassa HOM05D005695 ORTHO05D007810 6.1e-21 104.8 79 63.3
Medtr8g009700 Medicago truncatula HOM05D005695 ORTHO05D007810 6.1e-21 104.8 74 60.8
Sc23g0004120 Simmondsia chinensis HOM05D005695 ORTHO05D007810 6.1e-21 104.8 76 65.8
PSO063G4708 Papaver somniferum HOM05D005695 ORTHO05D007810 8.0e-21 104.4 78 65.4
unitig_22.g5902 Utricularia gibba HOM05D005695 ORTHO05D007810 1.0e-20 104.0 74 66.2
Os01g0535900 Oryza sativa ssp. japonica HOM05D005695 ORTHO05D007810 1.4e-20 103.6 79 62.0
SEGI_31772 Sequoiadendron giganteum HOM05D005695 ORTHO05D007810 1.4e-20 103.6 130 45.4
Ca_25883_v3 Cicer arietinum L. HOM05D005695 ORTHO05D007810 2.3e-20 102.8 104 54.8
PSO782G5257 Papaver somniferum HOM05D005695 ORTHO05D007810 3.0e-20 102.4 78 64.1
FAN10G2937 Fragaria x ananassa HOM05D005695 ORTHO05D007810 6.8e-20 101.3 80 61.2
Carub.0006s1590 Capsella rubella HOM05D005695 ORTHO05D007810 1.3e-18 97.1 74 59.5
CSS0005281 Camellia sinensis var. sinensis HOM05D005695 ORTHO05D007810 4.9e-18 95.1 65 67.7
Aa31LG11G11970 Aethionema arabicum HOM05D005695 ORTHO05D007810 6.3e-18 94.7 75 56.0
Thhalv10014195m.g Eutrema salsugineum HOM05D005695 ORTHO05D007810 1.4e-17 93.6 73 63.0
AL6G28750 Arabidopsis lyrata HOM05D005695 ORTHO05D007810 1.8e-17 93.2 75 57.3
AT5G17660 Arabidopsis thaliana HOM05D005695 ORTHO05D007810 1.8e-17 93.2 74 59.5
BcaC04g18770 Brassica carinata HOM05D005695 ORTHO05D007810 3.1e-17 92.4 74 60.8
A10p21740 Brassica napus HOM05D005695 ORTHO05D007810 3.1e-17 92.4 74 60.8
C09p59500 Brassica napus HOM05D005695 ORTHO05D007810 3.1e-17 92.4 74 60.8
BraA10t44235Z Brassica rapa HOM05D005695 ORTHO05D007810 3.1e-17 92.4 74 60.8
Sp6g26560 Schrenkiella parvula HOM05D005695 ORTHO05D007810 3.1e-17 92.4 74 60.8
CARHR195520 Cardamine hirsuta HOM05D005695 ORTHO05D007810 4.1e-17 92.0 73 58.9
BolC9t58788H Brassica oleracea HOM05D005695 ORTHO05D007810 1.6e-16 90.1 74 59.5
BcaB08g36754 Brassica carinata HOM05D005695 ORTHO05D007810 3.5e-16 89.0 76 59.2
HPP92_023786 Vanilla planifolia HOM05D005695 ORTHO05D007810 3.8e-15 85.5 68 58.8
Pp3c19_7240 Physcomitrium patens HOM05D005695 ORTHO05D007810 6.1e-13 78.2 72 54.2
Mapoly0006s0284 Marchantia polymorpha HOM05D005695 ORTHO05D007810 1.0e-12 77.4 73 53.4
Pp3c18_9830 Physcomitrium patens HOM05D005695 ORTHO05D007810 4.4e-11 72.0 73 50.7
SMO351G0486 Selaginella moellendorffii HOM05D005695 ORTHO05D007810 4.4e-11 72.0 75 48.0
Atru.chr2.1636 Acer truncatum HOM05D005695 ORTHO05D007810 3.7e-10 68.9 50 60.0
ATR0568G060 Amborella trichopoda HOM05D005695 ORTHO05D007810 4.1e-09 65.5 65 44.6
AagrBONN_evm.TU.Sc2ySwM_117.3790 Anthoceros agrestis HOM05D005695 ORTHO05D007810 3.5e-08 62.4 72 44.4
CBR_g38752 Chara braunii HOM05D005695 ORTHO05D007810 3.9e-07 58.9 72 43.1
Aqoxy1G01164 Aquilegia oxysepala HOM05D001395 ORTHO05D009785 7.3e-06 54.7 76 38.2
AUR62040009 Chenopodium quinoa HOM05D005695 ORTHO05D009785 7.3e-06 54.7 75 44.0


User provided reference genes

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