Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 2.7e-230 801.6 392 100.0
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.2e-185 653.3 398 80.2
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.7e-185 650.6 398 79.1
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 5.0e-184 647.9 392 81.1
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 9.4e-183 643.7 398 78.9
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 9.4e-183 643.7 398 78.4
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 2.3e-181 639.0 398 79.6
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 2.3e-181 639.0 362 85.6
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 5.2e-181 637.9 398 79.6
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 5.2e-181 637.9 398 77.9
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 5.7e-180 634.4 383 81.7
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.5e-180 634.0 374 82.1
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.3e-179 633.3 396 78.5
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 6.3e-179 630.9 399 76.9
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 6.3e-179 630.9 366 82.5
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.4e-178 629.8 357 83.5
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 1.4e-178 629.8 395 77.5
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 4.1e-178 628.2 395 77.7
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 5.4e-178 627.9 348 86.8
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 3.5e-177 625.2 368 82.6
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 7.7e-177 624.0 348 85.9
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.0e-176 623.6 400 77.0
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 1.0e-176 623.6 367 81.7
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 3.8e-176 621.7 399 77.9
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 3.8e-176 621.7 387 77.5
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 5.0e-176 621.3 357 83.8
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 6.6e-176 620.9 353 84.4
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 1.9e-175 619.4 348 85.1
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 2.5e-175 619.0 395 74.9
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 9.5e-175 617.1 398 75.6
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 9.5e-175 617.1 362 81.5
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 2.1e-174 615.9 349 84.0
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 3.6e-174 615.1 393 76.6
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 4.7e-174 614.8 367 79.3
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 6.1e-174 614.4 356 81.5
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 1.4e-173 613.2 347 83.9
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.8e-173 612.8 357 81.2
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 2.3e-173 612.5 358 82.7
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 1.2e-172 610.1 423 72.6
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 2.0e-172 609.4 400 75.0
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 3.4e-172 608.6 396 75.0
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 1.3e-171 606.7 365 79.5
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 2.9e-171 605.5 393 75.8
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 3.2e-170 602.1 392 75.3
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 7.0e-170 600.9 392 75.8
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 7.0e-170 600.9 352 81.0
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 9.2e-170 600.5 353 80.5
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 1.2e-169 600.1 358 80.2
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 1.6e-169 599.7 376 78.2
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.0e-169 599.4 392 74.7
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 2.7e-169 599.0 392 74.7
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 2.7e-169 599.0 362 79.6
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 4.6e-169 598.2 344 82.8
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.3e-168 596.7 364 80.5
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 1.7e-168 596.3 357 79.0
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.7e-168 596.3 364 80.5
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 3.9e-168 595.1 355 79.7
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 6.6e-168 594.3 357 78.4
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 8.6e-168 594.0 358 79.3
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 1.5e-167 593.2 345 82.0
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.5e-167 593.2 367 78.5
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.9e-167 592.8 346 82.9
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 5.6e-167 591.3 364 80.2
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 7.3e-167 590.9 392 74.0
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 7.3e-167 590.9 405 72.3
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 1.2e-166 590.1 348 80.7
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.2e-166 590.1 364 79.7
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 2.8e-166 589.0 460 65.9
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 8.0e-166 587.4 357 78.2
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 8.0e-166 587.4 347 81.0
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 8.0e-166 587.4 364 78.3
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 1.0e-165 587.0 350 80.3
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.0e-165 587.0 394 72.3
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 3.1e-165 585.5 393 73.5
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 3.1e-165 585.5 350 79.4
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 4.0e-165 585.1 397 73.6
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.5e-164 583.2 345 80.9
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 2.0e-164 582.8 353 78.8
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.6e-164 582.4 353 79.9
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.4e-164 582.0 351 79.8
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.3e-163 580.1 345 79.4
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.3e-163 580.1 400 71.2
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 3.7e-163 578.6 363 75.5
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 3.7e-163 578.6 351 78.9
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.1e-162 577.0 346 77.7
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.4e-162 576.6 365 77.0
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 5.4e-162 574.7 332 82.2
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.6e-161 573.2 327 83.2
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 3.5e-161 572.0 347 77.2
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 4.6e-161 571.6 318 84.9
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.0e-160 570.5 332 81.3
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.3e-160 570.1 347 77.2
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 1.1e-159 567.0 332 80.4
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.6e-158 563.1 346 77.2
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 1.5e-156 556.6 366 73.5
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 4.9e-155 551.6 354 74.6
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 8.1e-150 534.3 327 78.6
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.8e-149 533.1 369 71.3
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.1e-146 523.9 365 69.9
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 1.2e-145 520.4 363 69.1
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 4.6e-145 518.5 390 69.5
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 3.3e-143 512.3 381 66.4
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 9.6e-143 510.8 330 72.4
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 8.1e-142 507.7 363 66.7
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 6.8e-141 504.6 352 70.7
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 3.9e-136 488.8 399 63.7
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 3.9e-128 462.2 367 63.5
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 6.7e-128 461.5 392 62.0
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 1.3e-123 447.2 340 63.2
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.2e-115 419.9 249 80.3
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 2.5e-114 416.4 376 56.6
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 7.9e-113 411.4 279 72.8
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 3.0e-112 409.5 253 76.7
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 8.2e-110 401.4 241 78.0
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.1e-109 401.0 328 58.5
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.5e-106 389.8 289 69.2
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.6e-102 377.1 327 57.8
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.2e-97 360.9 377 49.3
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 2.7e-68 263.5 287 46.7
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.0e-67 261.5 187 69.5
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 2.2e-62 243.8 165 70.9
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 5.9e-60 235.7 160 68.8
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 1.3e-51 208.0 218 53.2
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 4.4e-47 193.0 131 71.8
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 4.9e-14 83.2 59 72.9
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 4.2e-13 80.1 91 49.5
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 4.2e-13 80.1 91 49.5
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 2.1e-09 67.8 35 80.0


User provided reference genes

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