Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060649.1 Olea europaea HOM05D003803 ORTHO05D004456 1.5e-42 175.6 78 100.0
Dinv42400 Davidia involucrata HOM05D003803 ORTHO05D004456 5.9e-12 73.9 50 74.0
Hma1.2p1_0179F.1_g079480 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 1.0e-11 73.2 45 75.6
Peaxi162Scf00348g00817 Petunia axillaris HOM05D003803 ORTHO05D004456 1.7e-11 72.4 49 67.3
Haze_26022 Corylus avellana HOM05D003803 ORTHO05D004456 2.9e-11 71.6 52 67.3
MELO3C015527.2 Cucumis melo HOM05D003803 ORTHO05D004456 3.9e-11 71.2 38 78.9
CsaV3_1G041120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 3.9e-11 71.2 38 78.9
Migut.L01571 Erythranthe guttata HOM05D003803 ORTHO05D004456 3.9e-11 71.2 49 69.4
CiPaw.03G205300 Carya illinoinensis HOM05D003803 ORTHO05D004456 5.0e-11 70.9 44 70.5
Cpa.g.sc28.25 Carica papaya HOM05D003803 ORTHO05D004456 6.6e-11 70.5 47 72.3
Rhsim05G0007000 Rhododendron simsii HOM05D003803 ORTHO05D004456 6.6e-11 70.5 60 63.3
MD02G1093600 Malus domestica HOM05D003803 ORTHO05D004456 1.5e-10 69.3 47 72.3
Nn8g38618 Nelumbo nucifera HOM05D003803 ORTHO05D004456 1.5e-10 69.3 38 78.9
Sabra06G0110200 Salix brachista HOM05D003803 ORTHO05D004456 1.5e-10 69.3 48 68.8
Cc06_g12240 Coffea canephora HOM05D003803 ORTHO05D004456 1.9e-10 68.9 50 70.0
Manes.16G094800 Manihot esculenta HOM05D003803 ORTHO05D004456 1.9e-10 68.9 47 70.2
Solyc07g041980.3 Solanum lycopersicum HOM05D003803 ORTHO05D004456 1.9e-10 68.9 46 65.2
Sopen07g021560 Solanum pennellii HOM05D003803 ORTHO05D004456 1.9e-10 68.9 46 65.2
unitig_85.g27251 Utricularia gibba HOM05D003803 ORTHO05D004456 1.9e-10 68.9 48 68.8
Atru.chr7.1717 Acer truncatum HOM05D003803 ORTHO05D004456 2.5e-10 68.6 47 74.5
CiPaw.04G142500 Carya illinoinensis HOM05D003803 ORTHO05D004456 2.5e-10 68.6 45 73.3
Hma1.2p1_0169F.1_g074460 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 2.5e-10 68.6 38 81.6
TWI34G0129 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 2.5e-10 68.6 46 71.7
Carub.0006s1897 Capsella rubella HOM05D003803 ORTHO05D004456 3.3e-10 68.2 38 78.9
CARHR192170 Cardamine hirsuta HOM05D003803 ORTHO05D004456 3.3e-10 68.2 38 78.9
Ciclev10010564m.g Citrus clementina HOM05D003803 ORTHO05D004456 3.3e-10 68.2 47 72.3
Thhalv10014548m.g Eutrema salsugineum HOM05D003803 ORTHO05D004456 3.3e-10 68.2 38 78.9
Sp6g23850 Schrenkiella parvula HOM05D003803 ORTHO05D004456 3.3e-10 68.2 38 78.9
GSVIVG01015067001 Vitis vinifera HOM05D003803 ORTHO05D004456 3.3e-10 68.2 46 67.4
BcaB01g04775 Brassica carinata HOM05D003803 ORTHO05D004456 4.3e-10 67.8 46 69.6
A03p10180 Brassica napus HOM05D003803 ORTHO05D004456 4.3e-10 67.8 38 78.9
BraA03t10328Z Brassica rapa HOM05D003803 ORTHO05D004456 4.3e-10 67.8 38 78.9
Gorai.001G015700 Gossypium raimondii HOM05D003803 ORTHO05D004456 4.3e-10 67.8 44 72.7
Nitab4.5_0000343g0290 Nicotiana tabacum HOM05D003803 ORTHO05D004456 5.6e-10 67.4 38 76.3
Nitab4.5_0009541g0010 Nicotiana tabacum HOM05D003803 ORTHO05D004456 5.6e-10 67.4 38 76.3
PGSC0003DMG400027887 Solanum tuberosum HOM05D003803 ORTHO05D004456 5.6e-10 67.4 46 69.6
unitig_699.g19272 Utricularia gibba HOM05D003803 ORTHO05D004456 5.6e-10 67.4 48 66.7
A10p19380 Brassica napus HOM05D003803 ORTHO05D004456 7.3e-10 67.0 38 76.3
vmacro06347 Vaccinium macrocarpon HOM05D003803 ORTHO05D004456 7.3e-10 67.0 45 68.9
BraA10t44015Z Brassica rapa HOM05D003803 ORTHO05D004456 9.5e-10 66.6 37 78.4
CAN.G595.3 Capsicum annuum HOM05D003803 ORTHO05D004456 9.5e-10 66.6 48 68.8
Potri.006G141100 Populus trichocarpa HOM05D003803 ORTHO05D004456 9.5e-10 66.6 45 68.9
BcaB05g22827 Brassica carinata HOM05D003803 ORTHO05D004456 1.2e-09 66.2 41 73.2
C03p11700 Brassica napus HOM05D003803 ORTHO05D004456 1.2e-09 66.2 37 78.4
BolC3t13641H Brassica oleracea HOM05D003803 ORTHO05D004456 1.2e-09 66.2 37 78.4
Prupe.7G197000 Prunus persica HOM05D003803 ORTHO05D004456 1.2e-09 66.2 47 70.2
Actinidia39653 Actinidia chinensis HOM05D003803 ORTHO05D004456 1.6e-09 65.9 38 76.3
BcaC03g13781 Brassica carinata HOM05D003803 ORTHO05D004456 1.6e-09 65.9 38 76.3
A02p06390 Brassica napus HOM05D003803 ORTHO05D004456 1.6e-09 65.9 38 76.3
BolC2t07055H Brassica oleracea HOM05D003803 ORTHO05D004456 1.6e-09 65.9 38 76.3
BraA02t05584Z Brassica rapa HOM05D003803 ORTHO05D004456 1.6e-09 65.9 38 76.3
Ca_09305_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 1.6e-09 65.9 39 74.4
COL.COLO4_18088 Corchorus olitorius HOM05D003803 ORTHO05D004456 1.6e-09 65.9 45 73.3
MSTRG.26474 Avicennia marina HOM05D003803 ORTHO05D004456 2.1e-09 65.5 45 64.4
MD15G1218900 Malus domestica HOM05D003803 ORTHO05D004456 2.1e-09 65.5 47 68.1
Manes.03G041000 Manihot esculenta HOM05D003803 ORTHO05D004456 2.1e-09 65.5 38 73.7
Eucgr.C03259 Eucalyptus grandis HOM05D003803 ORTHO05D004456 3.6e-09 64.7 46 69.6
FvH4_1g08850 Fragaria vesca HOM05D003803 ORTHO05D004456 3.6e-09 64.7 38 73.7
FAN19G2912 Fragaria x ananassa HOM05D003803 ORTHO05D004456 3.6e-09 64.7 38 73.7
FAN23G2205 Fragaria x ananassa HOM05D003803 ORTHO05D004456 3.6e-09 64.7 38 73.7
FAN26G0190 Fragaria x ananassa HOM05D003803 ORTHO05D004456 3.6e-09 64.7 38 73.7
FAN28G2731 Fragaria x ananassa HOM05D003803 ORTHO05D004456 3.6e-09 64.7 38 73.7
Gohir.A07G015200 Gossypium hirsutum HOM05D003803 ORTHO05D004456 3.6e-09 64.7 44 70.5
RcHm_v2.0_Chr2g0095321 Rosa chinensis HOM05D003803 ORTHO05D004456 3.6e-09 64.7 38 73.7
TAR636G1611 Trochodendron aralioides HOM05D003803 ORTHO05D004456 3.6e-09 64.7 49 69.4
Duzib168G2099 Durio zibethinus HOM05D003803 ORTHO05D004456 4.7e-09 64.3 47 68.1
Sed0024871 Sechium edule HOM05D003803 ORTHO05D004456 4.7e-09 64.3 38 71.1
FAN26G2608 Fragaria x ananassa HOM05D003803 ORTHO05D004456 6.2e-09 63.9 36 77.8
SalBow5G3024 Salvia bowleyana HOM05D003803 ORTHO05D004456 6.2e-09 63.9 50 62.0
SalBow5G4531 Salvia bowleyana HOM05D003803 ORTHO05D004456 6.2e-09 63.9 50 62.0
TWI63G1012 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 6.2e-09 63.9 46 67.4
ClCG03G015020 Citrullus lanatus HOM05D003803 ORTHO05D004456 8.0e-09 63.5 38 71.1
Dinv25550 Davidia involucrata HOM05D003803 ORTHO05D004456 8.0e-09 63.5 50 64.0
Oeu007415.1 Olea europaea HOM05D003803 ORTHO05D004456 8.0e-09 63.5 36 77.8
Thecc.09G075700 Theobroma cacao HOM05D003803 ORTHO05D004456 8.0e-09 63.5 48 60.4
THA.LOC104810996 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 1.0e-08 63.2 38 68.4
Duzib187G1358 Durio zibethinus HOM05D003803 ORTHO05D004456 1.4e-08 62.8 47 68.1
Lalb_Chr13g0299401 Lupinus albus HOM05D003803 ORTHO05D004456 1.4e-08 62.8 46 63.0
Lalb_Chr07g0181211 Lupinus albus HOM05D003803 ORTHO05D004456 1.8e-08 62.4 38 68.4
Sed0004681 Sechium edule HOM05D003803 ORTHO05D004456 1.8e-08 62.4 38 71.1
Actinidia30227 Actinidia chinensis HOM05D003803 ORTHO05D004456 2.3e-08 62.0 38 73.7
Gohir.A06G077000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 2.3e-08 62.0 48 60.4
Gohir.A13G190300 Gossypium hirsutum HOM05D003803 ORTHO05D004456 2.3e-08 62.0 47 61.7
Gohir.D13G196350 Gossypium hirsutum HOM05D003803 ORTHO05D004456 2.3e-08 62.0 47 61.7
Gorai.010G088900 Gossypium raimondii HOM05D003803 ORTHO05D004456 2.3e-08 62.0 48 60.4
Gorai.013G223800 Gossypium raimondii HOM05D003803 ORTHO05D004456 2.3e-08 62.0 47 61.7
AT5G20635 Arabidopsis thaliana HOM05D003803 ORTHO05D004456 3.1e-08 61.6 35 77.1
CANSAT56G4286 Cannabis sativa HOM05D003803 ORTHO05D004456 3.1e-08 61.6 38 71.1
Sed0026577 Sechium edule HOM05D003803 ORTHO05D004456 3.1e-08 61.6 46 60.9
Glyma.17G048600 Glycine max HOM05D003803 ORTHO05D004456 5.2e-08 60.8 38 71.1
Nn6g35693 Nelumbo nucifera HOM05D003803 ORTHO05D004456 5.2e-08 60.8 47 61.7
Phvul.003G130200 Phaseolus vulgaris HOM05D003803 ORTHO05D004456 5.2e-08 60.8 38 71.1
PGR044G0570 Punica granatum HOM05D003803 ORTHO05D004456 5.2e-08 60.8 47 63.8
THA.LOC104799616 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 5.2e-08 60.8 49 61.2
VMungo1215G1786 Vigna mungo HOM05D003803 ORTHO05D004456 5.2e-08 60.8 38 71.1
Medtr2g042200 Medicago truncatula HOM05D003803 ORTHO05D004456 6.8e-08 60.5 48 58.3
Duzib150G1133 Durio zibethinus HOM05D003803 ORTHO05D004456 8.9e-08 60.1 62 48.4
AL6G32180 Arabidopsis lyrata HOM05D003803 ORTHO05D004456 1.2e-07 59.7 35 74.3
MSTRG.10505 Avicennia marina HOM05D003803 ORTHO05D004456 1.2e-07 59.7 49 65.3
Gohir.D06G076000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.2e-07 59.7 48 58.3
Potri.018G062400 Populus trichocarpa HOM05D003803 ORTHO05D004456 1.2e-07 59.7 38 71.1
Hund26046 Selenicereus undatus HOM05D003803 ORTHO05D004456 1.2e-07 59.7 50 60.0
Psat1g134600 Pisum sativum HOM05D003803 ORTHO05D004456 3.4e-07 58.2 48 56.2
CDE05G2490 Ceratophyllum demersum HOM05D003803 ORTHO05D004456 4.4e-07 57.8 39 64.1
TPR.G8075 Trifolium pratense HOM05D003803 ORTHO05D004456 5.8e-07 57.4 39 61.5
TAR624G1266 Trochodendron aralioides HOM05D003803 ORTHO05D004456 5.8e-07 57.4 50 60.0
QL11p000998 Quercus lobata HOM05D003803 ORTHO05D004456 7.5e-07 57.0 34 73.5
Rhsim03G0227100 Rhododendron simsii HOM05D003803 ORTHO05D004456 1.7e-06 55.8 50 62.0
SGA_v2.0_scaffold21G09503 Striga asiatica HOM05D003803 ORTHO05D004456 1.7e-06 55.8 45 62.2
Sc15g0000470 Simmondsia chinensis HOM05D003803 ORTHO05D004456 2.2e-06 55.5 50 50.0
Hma1.2p1_0291F.1_g114940 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 2.9e-06 55.1 36 69.4
Aqoxy7G01029 Aquilegia oxysepala HOM05D003803 ORTHO05D004456 3.7e-06 54.7 38 63.2
Lj4g0012858 Lotus japonicus HOM05D003803 ORTHO05D004456 3.7e-06 54.7 33 66.7
BcaB08g36515 Brassica carinata HOM05D003803 ORTHO05D004456 4.9e-06 54.3 31 74.2
MELO3C004657.2 Cucumis melo HOM05D003803 ORTHO05D004456 6.4e-06 53.9 33 66.7
CsaV3_2G001120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 6.4e-06 53.9 33 66.7
Glyma.15G178100 Glycine max HOM05D003803 ORTHO05D004456 6.4e-06 53.9 45 55.6
Ca_02184_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 8.3e-06 53.5 48 52.1


User provided reference genes

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