Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 1.1e-90 336.7 181 100.0
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 2.9e-25 119.4 118 54.2
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 2.7e-23 112.8 155 44.5
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 2.7e-23 112.8 155 44.5
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.3e-22 110.5 113 49.6
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 8.6e-22 107.8 123 53.7
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.8e-20 102.8 163 40.5
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 6.2e-20 101.7 199 36.2
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 6.2e-20 101.7 122 44.3
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 5.2e-19 98.6 157 39.5
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.0e-18 96.7 174 37.9
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 8.3e-17 91.3 159 37.1
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 1.4e-16 90.5 116 47.4
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.9e-16 90.1 168 36.9
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 2.4e-16 89.7 141 41.8
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 7.1e-16 88.2 122 41.0
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 2.1e-15 86.7 100 49.0
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 2.1e-15 86.7 169 38.5
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 2.7e-15 86.3 162 36.4
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 2.7e-15 86.3 163 38.0
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 3.5e-15 85.9 164 36.0
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 3.5e-15 85.9 166 35.5
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 3.5e-15 85.9 125 40.0
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 3.5e-15 85.9 158 36.7
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 7.8e-15 84.7 127 42.5
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 3.9e-14 82.4 168 33.9
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 5.1e-14 82.0 165 37.0
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 6.6e-14 81.6 123 39.8
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 8.6e-14 81.3 124 40.3
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 8.6e-14 81.3 154 39.6
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 1.1e-13 80.9 122 40.2
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 1.5e-13 80.5 168 32.7
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 2.5e-13 79.7 165 36.4
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 2.5e-13 79.7 110 49.1
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 3.3e-13 79.3 145 34.5
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 7.3e-13 78.2 118 37.3
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 9.6e-13 77.8 116 39.7
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 1.6e-12 77.0 100 43.0
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 2.1e-12 76.6 123 41.5
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 4.7e-12 75.5 124 36.3
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 6.2e-12 75.1 119 37.0
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 1.1e-11 74.3 119 40.3
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.1e-11 74.3 174 33.9
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 1.8e-11 73.6 119 36.1
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.4e-11 73.2 181 34.3
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.4e-11 73.2 151 36.4
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 2.4e-11 73.2 126 37.3
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 3.1e-11 72.8 84 46.4
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 1.2e-10 70.9 178 29.8
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 2.0e-10 70.1 119 38.7
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.6e-10 69.7 130 37.7
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 4.4e-10 68.9 168 32.7
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 7.6e-10 68.2 162 34.0
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 7.6e-10 68.2 174 31.0
Hund13295 Selenicereus undatus HOM05D007214 ORTHO05D008907 2.2e-09 66.6 141 34.0
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 2.9e-09 66.2 164 31.7
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 4.9e-09 65.5 123 35.8
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 4.9e-09 65.5 116 37.9
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 4.9e-09 65.5 109 38.5
TPR.G39060 Trifolium pratense HOM05D007214 ORTHO05D008907 1.9e-08 63.5 144 34.7
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 2.4e-08 63.2 123 35.0
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 9.3e-08 61.2 119 36.1
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.6e-07 60.5 151 31.1
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 1.6e-07 60.5 122 33.6
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 1.6e-07 60.5 115 34.8
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 4.6e-07 58.9 123 35.8
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 4.6e-07 58.9 123 35.8
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 1.3e-06 57.4 120 35.0
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 1.7e-06 57.0 124 35.5
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 1.7e-06 57.0 124 36.3
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 1.7e-06 57.0 119 35.3
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 2.3e-06 56.6 119 37.0
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 3.9e-06 55.8 153 33.3
BraA06t26977Z Brassica rapa HOM05D007214 ORTHO05D008907 5.1e-06 55.5 120 35.8
FAN05G0748 Fragaria x ananassa HOM05D007214 ORTHO05D008907 5.1e-06 55.5 99 36.4


User provided reference genes

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