Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 8.9e-279 963.0 494 100.0
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 6.5e-104 382.1 396 55.3
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 2.7e-102 376.7 396 54.5
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 7.4e-100 368.6 396 54.5
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 2.4e-98 363.6 383 55.1
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 2.6e-97 360.1 380 54.2
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 1.6e-94 350.9 397 52.1
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 3.6e-94 349.7 395 50.4
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 4.6e-94 349.4 394 51.0
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 4.6e-94 349.4 382 51.8
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.8e-93 347.4 382 51.6
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 1.5e-92 344.4 398 49.7
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.3e-91 341.3 394 50.3
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 1.4e-90 337.8 397 50.4
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 4.5e-89 332.8 378 50.5
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 7.7e-89 332.0 387 49.9
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 7.7e-89 332.0 384 49.2
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 1.0e-88 331.6 397 49.1
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 1.7e-88 330.9 381 50.1
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 3.8e-88 329.7 398 47.5
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 3.8e-88 329.7 398 49.2
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 3.8e-88 329.7 371 50.9
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.8e-88 329.7 384 49.2
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.5e-88 328.9 395 49.6
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 6.5e-88 328.9 386 49.2
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 4.2e-87 326.2 383 48.8
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 4.2e-87 326.2 391 49.1
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 1.2e-86 324.7 404 47.8
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 4.7e-86 322.8 347 51.9
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 7.9e-86 322.0 376 50.5
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 7.9e-86 322.0 381 49.9
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.4e-85 321.2 383 48.3
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.8e-85 320.9 384 48.2
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 2.3e-85 320.5 392 48.0
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 2.3e-85 320.5 380 50.3
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 2.3e-85 320.5 344 51.5
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 3.9e-85 319.7 386 48.4
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 5.1e-85 319.3 397 48.9
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 8.8e-85 318.5 341 51.6
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 8.8e-85 318.5 387 48.3
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.1e-84 318.2 340 51.5
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 2.0e-84 317.4 398 46.5
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 2.6e-84 317.0 340 51.2
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 4.4e-84 316.2 340 51.2
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 7.4e-84 315.5 384 47.4
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 7.4e-84 315.5 386 48.2
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 1.3e-83 314.7 343 50.7
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.3e-83 314.7 401 46.1
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 1.7e-83 314.3 383 47.3
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 2.2e-83 313.9 391 47.1
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 2.8e-83 313.5 382 48.4
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 2.8e-83 313.5 385 46.2
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 3.7e-83 313.2 385 47.8
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 3.7e-83 313.2 385 46.2
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 4.8e-83 312.8 356 50.6
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 4.8e-83 312.8 387 47.5
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 6.3e-83 312.4 381 47.5
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 1.1e-82 311.6 389 46.8
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 1.4e-82 311.2 389 46.8
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.4e-82 311.2 396 45.5
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 9.1e-82 308.5 394 45.2
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 1.2e-81 308.1 367 48.2
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 5.9e-81 305.8 402 45.0
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.0e-80 305.1 348 50.0
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.0e-80 305.1 395 46.8
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 1.0e-80 305.1 341 50.4
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 2.9e-80 303.5 380 46.6
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 5.0e-80 302.8 358 49.2
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 6.5e-80 302.4 336 50.9
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 1.4e-79 301.2 345 49.9
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 2.5e-79 300.4 336 50.6
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 4.2e-79 299.7 405 47.7
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 7.2e-79 298.9 375 46.7
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 1.2e-78 298.1 381 45.1
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 1.2e-78 298.1 340 48.5
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 1.2e-78 298.1 424 45.8
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 8.0e-78 295.4 412 44.4
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.8e-77 294.3 395 44.8
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 3.0e-77 293.5 413 43.1
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.1e-76 291.6 352 48.9
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 7.4e-76 288.9 365 47.1
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 2.8e-75 287.0 345 47.8
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 1.8e-74 284.3 361 45.7
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 3.1e-74 283.5 330 47.3
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 5.9e-73 279.3 333 46.5
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 1.0e-72 278.5 312 50.3
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 1.7e-72 277.7 348 46.0
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 2.9e-72 276.9 355 44.8
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 6.5e-72 275.8 306 50.7
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 6.5e-72 275.8 350 47.1
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 6.5e-72 275.8 312 47.8
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.5e-71 272.7 298 49.3
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.1e-70 270.8 318 48.4
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.8e-66 257.7 385 40.0
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 6.5e-64 249.2 274 49.6
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 6.5e-64 249.2 320 43.8
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.2e-61 239.6 274 47.4
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.2e-60 238.4 213 58.2
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 1.2e-60 238.4 339 45.4
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 1.9e-55 221.1 316 42.7
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 1.6e-54 218.0 321 39.9
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 4.0e-53 213.4 321 39.6
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 4.5e-49 199.9 328 39.3
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 1.5e-47 194.9 323 37.5
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 4.3e-47 193.4 350 36.0
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.0e-44 184.5 128 69.5
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 2.2e-43 181.0 230 45.2
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 4.1e-34 150.2 105 68.6
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 5.1e-32 143.3 370 30.3
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.3e-19 102.1 67 73.1
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 3.8e-19 100.5 74 64.9
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.8e-19 100.5 67 73.1
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.8e-19 100.5 67 73.1
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.5e-17 94.0 64 65.6
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.9e-16 90.5 63 63.5
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 1.2e-09 68.9 316 25.9
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 4.3e-07 60.5 35 74.3


User provided reference genes

Program Settings