Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 2.8e-191 671.8 333 100.0
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 5.6e-136 488.0 330 72.7
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.8e-134 483.0 330 72.1
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 6.9e-134 481.1 313 76.4
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.5e-133 479.9 330 72.4
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 2.6e-133 479.2 318 74.2
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 9.9e-133 477.2 330 71.5
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.2e-132 476.1 318 73.9
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 2.9e-132 475.7 315 74.9
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 6.4e-132 474.6 330 71.8
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 6.4e-132 474.6 322 72.7
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 1.9e-131 473.0 321 74.1
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.9e-131 473.0 323 73.1
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 1.2e-130 470.3 323 72.1
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 2.1e-130 469.5 316 74.4
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 6.0e-130 468.0 316 73.4
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 6.0e-130 468.0 316 73.4
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 7.9e-130 467.6 320 72.2
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.3e-129 466.8 317 73.8
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.8e-129 466.5 322 72.4
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.9e-129 465.3 313 74.8
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-128 463.8 323 71.2
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.3e-128 462.2 322 71.4
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 7.4e-128 461.1 316 72.8
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 3.7e-127 458.8 330 68.2
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 4.8e-127 458.4 325 69.8
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.4e-126 456.8 342 67.8
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.4e-126 456.8 315 70.8
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.4e-126 456.8 326 70.9
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 3.1e-126 455.7 321 70.4
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 1.2e-125 453.8 315 70.2
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.5e-125 453.4 317 71.3
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.5e-125 453.4 316 71.8
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 3.4e-125 452.2 312 71.5
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 3.4e-125 452.2 315 70.2
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 4.5e-125 451.8 312 71.5
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 4.5e-125 451.8 312 71.5
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 5.8e-125 451.4 311 72.0
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.7e-124 449.9 323 66.3
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 2.9e-124 449.1 313 70.9
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 3.8e-124 448.7 323 65.6
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.9e-124 448.4 333 68.8
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 4.9e-124 448.4 312 70.8
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 1.1e-123 447.2 311 70.1
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 3.2e-123 445.7 320 70.9
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 3.2e-123 445.7 323 68.7
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 4.2e-123 445.3 322 68.0
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 4.2e-123 445.3 318 69.5
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 9.3e-123 444.1 323 70.0
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.6e-122 443.4 312 71.2
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 3.5e-122 442.2 312 71.2
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 4.6e-122 441.8 345 66.4
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.0e-121 440.7 311 70.7
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.0e-121 440.7 314 70.4
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.3e-121 440.3 313 70.6
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.3e-121 440.3 313 70.6
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.3e-121 440.3 313 70.6
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 3.9e-121 438.7 326 67.8
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 6.7e-121 438.0 312 69.9
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.1e-120 437.2 312 70.8
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 1.5e-120 436.8 321 69.5
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 1.9e-120 436.4 314 68.8
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 5.7e-120 434.9 282 77.0
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 5.7e-120 434.9 320 69.1
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 9.7e-120 434.1 316 70.3
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 1.3e-119 433.7 315 67.0
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.6e-119 433.3 313 69.6
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 2.2e-119 433.0 328 66.8
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 6.3e-119 431.4 319 68.0
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.4e-118 429.5 339 65.2
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 1.9e-115 419.9 335 63.9
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 3.2e-115 419.1 293 70.0
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 2.1e-114 416.4 322 63.7
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 2.1e-114 416.4 292 70.2
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 6.1e-114 414.8 273 77.3
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 6.1e-114 414.8 318 66.7
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 7.9e-114 414.5 317 65.0
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 3.0e-113 412.5 322 64.6
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 4.3e-112 408.7 308 64.9
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.7e-111 406.8 311 65.9
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.6e-109 399.4 345 59.7
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 3.8e-108 395.6 280 70.7
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 2.1e-106 389.8 325 58.8
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 6.1e-98 361.7 324 59.9
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.3e-97 359.8 233 78.1
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 3.0e-97 359.4 245 72.7
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 3.9e-97 359.0 254 70.9
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.5e-96 357.1 309 56.0
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.4e-94 350.5 303 57.1
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 2.1e-90 336.7 315 58.1
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 8.0e-90 334.7 326 55.5
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 1.8e-89 333.6 317 57.7
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 7.7e-85 318.2 306 51.3
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 7.2e-83 311.6 305 50.5
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 1.8e-81 307.0 229 67.7
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.8e-81 305.1 305 47.5
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.5e-80 303.9 330 48.8
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 7.5e-80 301.6 308 48.7
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 7.5e-80 301.6 308 48.7
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.9e-76 289.7 305 46.9
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.1e-75 287.7 305 46.2
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 2.5e-75 286.6 325 48.3
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.2e-75 285.0 305 47.5
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 3.6e-74 282.7 257 54.5
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.8e-73 280.4 305 45.9
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.5e-72 277.3 305 44.9
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.7e-60 237.3 322 44.1
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 5.8e-56 222.2 213 53.5
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.7e-39 167.5 127 66.9
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 6.4e-31 139.0 333 31.2
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.6e-26 124.4 116 59.5
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 5.0e-07 59.7 40 70.0


User provided reference genes

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