Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 2.3e-191 672.2 357 100.0
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.1e-180 636.7 341 100.0
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 4.0e-140 501.9 342 76.0
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 2.3e-135 486.1 342 73.7
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 4.5e-99 365.5 352 55.1
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 1.0e-98 364.4 350 55.4
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 1.4e-92 344.0 360 54.2
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 7.0e-92 341.7 354 53.7
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 5.9e-91 338.6 350 53.1
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 2.8e-88 329.7 354 51.4
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 2.0e-86 323.6 358 53.1
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 7.0e-84 315.1 357 49.3
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.3e-81 306.2 366 49.7
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 5.6e-81 305.4 365 47.4
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.6e-80 302.8 366 49.2
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.3e-79 300.1 361 48.5
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 8.9e-79 298.1 347 49.0
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 4.4e-78 295.8 362 48.3
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.7e-78 295.4 355 48.5
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.9e-77 293.1 355 48.2
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 3.7e-77 292.7 368 46.7
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 2.4e-76 290.0 365 46.8
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 1.0e-74 284.6 360 46.9
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 5.0e-74 282.3 357 46.8
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 1.1e-73 281.2 361 47.1
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 1.5e-73 280.8 359 47.6
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.5e-73 280.8 365 46.3
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 3.3e-73 279.6 373 46.9
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 3.3e-73 279.6 373 46.9
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 9.5e-73 278.1 355 47.9
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 1.2e-72 277.7 360 44.7
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 2.1e-72 276.9 356 46.3
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.8e-72 276.6 365 45.5
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 4.7e-72 275.8 373 47.7
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 6.2e-72 275.4 354 46.0
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 1.4e-71 274.2 358 47.5
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.3e-71 273.5 365 45.2
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 4.0e-71 272.7 354 47.2
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 5.2e-71 272.3 359 45.7
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 6.8e-71 271.9 356 46.6
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 3.4e-70 269.6 358 45.3
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 3.4e-70 269.6 374 42.2
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 4.4e-70 269.2 353 45.9
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 5.8e-70 268.9 376 44.4
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 7.5e-70 268.5 353 45.9
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 1.3e-69 267.7 353 45.6
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 2.2e-69 266.9 376 44.4
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.7e-69 266.2 376 44.1
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.7e-69 266.2 376 44.1
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.7e-69 266.2 376 44.4
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 3.7e-69 266.2 358 45.8
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 6.4e-69 265.4 358 45.5
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 6.4e-69 265.4 376 44.1
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 8.3e-69 265.0 355 45.1
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.1e-68 264.6 355 46.5
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 4.1e-68 262.7 375 43.7
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.0e-68 261.9 356 46.1
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 7.0e-68 261.9 358 45.5
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.6e-67 260.8 360 45.6
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 1.6e-67 260.8 260 61.2
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.0e-67 260.4 360 45.8
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 3.5e-67 259.6 276 54.3
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.5e-67 259.6 362 44.8
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.6e-67 259.2 360 45.3
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 4.6e-67 259.2 363 46.8
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 6.0e-67 258.8 358 46.1
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.7e-66 257.3 357 45.1
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 1.7e-66 257.3 359 43.5
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.3e-66 256.9 355 44.8
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.0e-66 256.5 376 43.4
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 5.0e-66 255.8 365 44.4
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 9.5e-65 251.5 360 45.6
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.1e-64 250.4 365 44.7
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.8e-64 250.0 361 44.9
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.7e-64 249.2 360 45.0
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.4e-63 247.7 377 46.2
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 1.8e-63 247.3 297 48.1
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 6.8e-63 245.4 376 41.5
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 2.0e-62 243.8 376 41.5
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 2.0e-62 243.8 358 41.9
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 3.4e-62 243.0 364 43.4
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 7.5e-62 241.9 358 41.9
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.9e-61 240.0 365 39.7
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 3.7e-61 239.6 359 42.6
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.7e-61 239.6 356 43.8
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 6.4e-61 238.8 371 42.6
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 7.1e-60 235.3 362 41.4
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 9.2e-60 235.0 346 43.4
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.2e-59 234.6 308 46.4
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 1.2e-59 234.6 361 41.8
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 1.0e-58 231.5 371 41.2
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 1.7e-58 230.7 363 41.9
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.2e-56 224.6 362 41.2
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 6.2e-56 222.2 351 42.5
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 8.1e-56 221.9 349 41.3
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 1.8e-55 220.7 358 41.6
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 8.9e-55 218.4 348 40.8
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 4.4e-54 216.1 362 40.1
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.7e-53 214.2 300 41.0
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 4.9e-53 212.6 357 39.2
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 4.9e-53 212.6 362 40.1
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 8.4e-53 211.8 359 39.0
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 1.9e-52 210.7 357 40.3
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 1.9e-52 210.7 359 39.6
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 2.4e-52 210.3 379 40.1
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 7.1e-52 208.8 355 39.7
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 9.2e-52 208.4 361 38.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 9.2e-52 208.4 379 39.8
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 9.2e-52 208.4 356 39.9
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 1.6e-51 207.6 359 39.8
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 6.0e-51 205.7 361 39.6
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 6.6e-50 202.2 368 38.3
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 1.9e-49 200.7 357 39.8
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 1.2e-48 198.0 341 39.3
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 3.6e-48 196.4 313 42.8
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 6.2e-48 195.7 351 39.0
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 8.1e-48 195.3 361 38.2
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 1.4e-47 194.5 368 38.0
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.8e-47 194.1 358 38.0
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 6.9e-47 192.2 365 38.6
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 9.9e-46 188.3 275 42.2
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 2.9e-45 186.8 363 38.8
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.6e-43 181.0 357 36.1
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 1.6e-43 181.0 355 38.0
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 2.7e-43 180.3 353 38.5
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 4.6e-43 179.5 356 37.4
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 2.3e-42 177.2 244 45.1
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 5.1e-42 176.0 356 37.1
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 6.6e-42 175.6 337 36.2
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 1.5e-41 174.5 368 35.3
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 3.3e-41 173.3 335 36.7
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 7.3e-41 172.2 350 35.1
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.6e-40 169.9 356 36.8
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.0e-38 164.1 262 42.4
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 3.8e-37 159.8 352 34.9
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 1.9e-36 157.5 353 35.7
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.2e-36 156.8 349 35.0
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 7.1e-36 155.6 360 35.0
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 9.3e-36 155.2 369 34.7
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.6e-35 154.5 361 34.9
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 2.1e-35 154.1 360 34.7
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 3.0e-34 150.2 375 33.1
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 3.0e-34 150.2 351 35.0
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 6.7e-34 149.1 354 34.5
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 8.7e-34 148.7 359 34.5
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.5e-33 147.9 355 34.1
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 1.9e-33 147.5 349 33.5
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 3.3e-33 146.7 374 32.6
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 4.3e-33 146.4 354 34.5
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 4.3e-33 146.4 354 34.5
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 9.9e-30 135.2 314 36.0
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 3.2e-28 130.2 280 34.6
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 1.3e-26 124.8 263 35.7
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 5.1e-26 122.9 375 30.7
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 1.2e-22 111.7 364 29.1
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.2e-21 107.5 230 39.1
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.9e-21 107.1 230 39.1
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 3.5e-19 100.1 253 36.4
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 4.6e-19 99.8 225 43.6
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 3.9e-18 96.7 237 36.3
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.5e-17 94.7 237 38.0
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 2.5e-17 94.0 337 29.1
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 2.8e-16 90.5 237 32.5
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 1.5e-14 84.7 234 31.6
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.5e-14 83.2 146 40.4
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 1.0e-13 82.0 285 29.8
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 6.1e-11 72.8 189 32.3
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 7.9e-11 72.4 274 27.7
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.3e-08 65.1 162 32.7
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 6.9e-07 59.3 40 67.5


User provided reference genes

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