Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 2.0e-162 575.9 321 100.0
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 1.5e-122 443.4 323 74.3
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 2.3e-118 429.5 328 69.8
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 6.2e-116 421.4 315 69.2
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 1.4e-115 420.2 322 69.3
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 6.5e-113 411.4 320 67.2
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 8.4e-113 411.0 322 69.6
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 1.4e-112 410.2 329 71.7
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 5.5e-112 408.3 324 67.3
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 1.6e-111 406.8 323 61.6
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 2.1e-111 406.4 346 69.1
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 2.7e-111 406.0 326 72.7
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.7e-111 406.0 337 68.5
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 4.6e-111 405.2 325 70.2
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 6.0e-111 404.8 324 61.4
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 7.9e-111 404.4 326 68.7
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 1.8e-110 403.3 326 66.9
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 2.3e-110 402.9 322 70.5
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 6.7e-110 401.4 325 61.8
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 2.5e-109 399.4 323 60.4
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 5.7e-109 398.3 326 67.5
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 3.1e-107 392.5 322 70.5
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 7.7e-106 387.9 317 69.4
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 5.0e-105 385.2 346 58.4
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 1.4e-104 383.6 321 67.6
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 5.5e-104 381.7 327 67.9
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 1.6e-103 380.2 345 66.1
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 2.7e-103 379.4 322 66.8
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 6.1e-103 378.3 380 55.3
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 1.4e-102 377.1 326 64.1
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 1.1e-101 374.0 344 64.2
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 9.7e-101 370.9 334 66.5
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 4.1e-99 365.5 333 65.5
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 4.1e-99 365.5 330 56.4
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 4.1e-99 365.5 318 67.0
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.3e-99 365.2 331 56.2
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 6.9e-99 364.8 323 61.0
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.2e-98 364.0 330 56.1
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 1.2e-98 364.0 333 64.0
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.5e-98 363.6 331 63.1
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 2.0e-98 363.2 298 65.4
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 4.5e-98 362.1 312 67.3
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.0e-97 360.9 355 61.4
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 2.2e-97 359.8 315 61.3
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 6.5e-97 358.2 322 60.9
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 8.5e-97 357.8 327 56.3
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 1.9e-96 356.7 317 67.2
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 1.9e-96 356.7 352 61.1
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 7.2e-96 354.8 345 60.0
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 7.2e-96 354.8 325 56.9
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 9.4e-96 354.4 316 63.9
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 1.2e-95 354.0 361 62.9
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 1.6e-95 353.6 322 62.1
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.1e-95 353.2 322 55.3
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 2.7e-95 352.8 268 68.7
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 4.7e-95 352.1 333 61.0
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.0e-94 350.9 346 60.7
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 1.8e-94 350.1 321 62.6
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 3.3e-93 345.9 312 58.7
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 3.7e-92 342.4 334 66.5
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 4.8e-92 342.0 323 58.2
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 6.3e-92 341.7 319 63.6
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 1.1e-91 340.9 309 57.0
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 1.5e-90 337.0 325 59.4
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 7.7e-90 334.7 323 55.4
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 6.5e-89 331.6 313 61.0
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 9.4e-88 327.8 314 56.1
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 8.0e-87 324.7 333 50.8
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.4e-86 323.9 322 59.3
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 2.3e-86 323.2 337 55.2
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 1.1e-85 320.9 347 53.0
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 1.5e-85 320.5 324 54.9
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 8.2e-84 314.7 343 57.4
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 1.4e-83 313.9 342 57.0
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 2.4e-83 313.2 334 57.2
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 3.1e-83 312.8 334 56.9
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 3.1e-83 312.8 334 57.2
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 7.0e-83 311.6 314 57.0
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 1.2e-82 310.8 345 58.3
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 2.0e-82 310.1 324 53.4
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 2.6e-82 309.7 342 55.0
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 2.6e-82 309.7 321 57.9
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 4.5e-82 308.9 328 60.4
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 7.7e-82 308.1 345 57.1
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 7.7e-82 308.1 324 53.7
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.7e-81 307.0 321 58.3
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 1.7e-81 307.0 342 54.4
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.7e-81 307.0 342 54.7
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 1.7e-81 307.0 342 54.4
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 1.7e-81 307.0 342 54.4
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 5.0e-81 305.4 342 56.7
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 1.1e-80 304.3 380 52.6
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 1.9e-80 303.5 325 50.2
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.2e-80 302.8 313 48.9
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.2e-80 302.8 313 49.2
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 4.2e-80 302.4 356 53.1
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 9.4e-80 301.2 313 48.9
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 4.0e-78 295.8 374 50.5
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 3.7e-76 289.3 333 47.1
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 9.1e-75 284.6 308 56.8
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.6e-74 283.9 307 53.4
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.6e-74 283.9 313 48.2
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.0e-73 281.2 330 57.9
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 2.3e-70 270.0 319 60.2
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.3e-68 264.2 259 67.2
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 5.4e-67 258.8 310 46.5
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 8.0e-63 245.0 313 42.8
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.4e-62 244.2 323 44.6
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 5.2e-62 242.3 147 76.9
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 9.2e-59 231.5 303 42.9
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 6.6e-57 225.3 332 48.2
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 1.5e-56 224.2 349 49.9
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 2.9e-52 209.9 390 38.5
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 2.8e-47 193.4 128 67.2
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.2e-47 192.2 226 44.2
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.1e-46 191.4 320 41.6
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 3.1e-46 189.9 120 71.7
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 1.9e-40 170.6 133 57.1
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 1.2e-34 151.4 297 37.4
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.0e-33 148.3 164 47.0
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 4.0e-30 136.3 297 29.6
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 9.9e-29 131.7 297 29.0
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 2.4e-27 127.1 323 35.3
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 7.1e-27 125.6 313 29.7
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 4.6e-26 122.9 145 42.8
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.3e-23 114.8 104 51.9
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 3.5e-18 96.7 194 43.3
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 1.3e-17 94.7 63 66.7
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 2.2e-12 77.4 54 64.8
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 1.9e-08 64.3 91 41.8
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 6.2e-07 59.3 97 37.1
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 6.9e-06 55.8 117 29.1


User provided reference genes

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