Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060352.1 Olea europaea HOM05D005021 ORTHO05D006824 5.5e-281 970.3 489 100.0
Oeu060353.1 Olea europaea HOM05D005021 ORTHO05D006824 2.9e-274 948.0 479 99.8
Migut.M01986 Erythranthe guttata HOM05D005021 ORTHO05D006824 9.8e-230 800.0 480 84.0
Dinv25918 Davidia involucrata HOM05D005021 ORTHO05D006824 6.8e-223 777.3 486 82.1
CSS0004737 Camellia sinensis var. sinensis HOM05D005021 ORTHO05D006824 2.2e-221 772.3 485 80.6
Solyc02g068720.3 Solanum lycopersicum HOM05D005021 ORTHO05D006824 2.2e-221 772.3 485 80.0
Sopen02g017890 Solanum pennellii HOM05D005021 ORTHO05D006824 3.7e-221 771.5 485 80.0
Nitab4.5_0001288g0150 Nicotiana tabacum HOM05D005021 ORTHO05D006824 3.5e-219 765.0 485 80.0
FAN21G1452 Fragaria x ananassa HOM05D005021 ORTHO05D006824 1.7e-218 762.7 485 79.8
Hma1.2p1_1005F.1_g246940 Hydrangea macrophylla HOM05D005021 ORTHO05D006824 5.1e-218 761.1 486 80.9
CANSAT35G0082 Cannabis sativa HOM05D005021 ORTHO05D006824 6.6e-218 760.8 480 80.2
FvH4_3g12410 Fragaria vesca HOM05D005021 ORTHO05D006824 6.6e-218 760.8 485 79.8
Nitab4.5_0007745g0040 Nicotiana tabacum HOM05D005021 ORTHO05D006824 8.6e-218 760.4 496 78.4
Cc09_g06010 Coffea canephora HOM05D005021 ORTHO05D006824 1.5e-217 759.6 484 79.8
RcHm_v2.0_Chr5g0020301 Rosa chinensis HOM05D005021 ORTHO05D006824 1.5e-217 759.6 484 80.0
Prupe.4G113100 Prunus persica HOM05D005021 ORTHO05D006824 3.3e-217 758.4 484 79.8
COL.COLO4_17653 Corchorus olitorius HOM05D005021 ORTHO05D006824 9.6e-217 756.9 486 79.8
CAN.G149.8 Capsicum annuum HOM05D005021 ORTHO05D006824 1.2e-216 756.5 489 78.5
FAN16G3288 Fragaria x ananassa HOM05D005021 ORTHO05D006824 1.1e-215 753.4 499 77.8
MD10G1231300 Malus domestica HOM05D005021 ORTHO05D006824 1.8e-215 752.7 486 79.0
TWI38G0776 Tripterygium wilfordii HOM05D005021 ORTHO05D006824 2.4e-215 752.3 483 79.1
GSVIVG01012103001 Vitis vinifera HOM05D005021 ORTHO05D006824 3.1e-215 751.9 486 79.8
Potri.012G124400 Populus trichocarpa HOM05D005021 ORTHO05D006824 8.9e-215 750.4 487 78.4
Sabra12G0094200 Salix brachista HOM05D005021 ORTHO05D006824 8.9e-215 750.4 487 78.4
Thecc.02G008800 Theobroma cacao HOM05D005021 ORTHO05D006824 1.2e-214 750.0 486 79.2
RhsimUnG0043400 Rhododendron simsii HOM05D005021 ORTHO05D006824 1.5e-214 749.6 486 79.2
Atru.chr10.559 Acer truncatum HOM05D005021 ORTHO05D006824 2.6e-214 748.8 484 78.5
Duzib248G0067 Durio zibethinus HOM05D005021 ORTHO05D006824 9.9e-214 746.9 486 78.8
Glyma.20G019300 Glycine max HOM05D005021 ORTHO05D006824 9.9e-214 746.9 486 77.2
QL11p016313 Quercus lobata HOM05D005021 ORTHO05D006824 9.9e-214 746.9 486 78.8
Cfa000703 Carpinus fangiana HOM05D005021 ORTHO05D006824 1.3e-213 746.5 486 78.6
arahy.Tifrunner.gnm1.ann1.79RC6W Arachis hypogaea HOM05D005021 ORTHO05D006824 8.4e-213 743.8 491 76.6
Ciclev10014047m.g Citrus clementina HOM05D005021 ORTHO05D006824 8.4e-213 743.8 484 78.3
SalBow8G3018 Salvia bowleyana HOM05D005021 ORTHO05D006824 1.9e-212 742.7 484 79.1
VMungo0251G3115 Vigna mungo HOM05D005021 ORTHO05D006824 1.6e-211 739.6 486 76.3
Eucgr.D00052 Eucalyptus grandis HOM05D005021 ORTHO05D006824 2.1e-211 739.2 485 77.9
ECA238G3003 Erigeron canadensis HOM05D005021 ORTHO05D006824 3.5e-211 738.4 486 78.2
CiPaw.10G064100 Carya illinoinensis HOM05D005021 ORTHO05D006824 4.6e-211 738.0 486 78.0
MD05G1250500 Malus domestica HOM05D005021 ORTHO05D006824 6.0e-211 737.6 486 78.0
Gorai.002G164100 Gossypium raimondii HOM05D005021 ORTHO05D006824 7.8e-211 737.3 486 78.0
Gohir.A01G141263 Gossypium hirsutum HOM05D005021 ORTHO05D006824 1.0e-210 736.9 486 78.0
AL4G31120 Arabidopsis lyrata HOM05D005021 ORTHO05D006824 2.3e-210 735.7 482 77.0
Psat7g129680 Pisum sativum HOM05D005021 ORTHO05D006824 2.3e-210 735.7 486 76.3
TWI38G0923 Tripterygium wilfordii HOM05D005021 ORTHO05D006824 3.9e-210 734.9 483 77.4
Thhalv10016146m.g Eutrema salsugineum HOM05D005021 ORTHO05D006824 5.1e-210 734.6 484 76.7
Phvul.002G097500 Phaseolus vulgaris HOM05D005021 ORTHO05D006824 5.1e-210 734.6 486 75.7
THA.LOC104798554 Tarenaya hassleriana HOM05D005021 ORTHO05D006824 5.1e-210 734.6 486 76.7
Gohir.D01G132500 Gossypium hirsutum HOM05D005021 ORTHO05D006824 6.6e-210 734.2 486 78.0
Carub.0004s1679 Capsella rubella HOM05D005021 ORTHO05D006824 8.7e-210 733.8 487 76.4
HanXRQChr14g0447451 Helianthus annuus HOM05D005021 ORTHO05D006824 8.7e-210 733.8 486 77.8
Cpa.g.sc30.159 Carica papaya HOM05D005021 ORTHO05D006824 1.5e-209 733.0 483 77.6
TPR.G38288 Trifolium pratense HOM05D005021 ORTHO05D006824 2.5e-209 732.3 486 75.7
Aqoxy1G01424 Aquilegia oxysepala HOM05D005021 ORTHO05D006824 3.3e-209 731.9 484 76.7
Sp4g17340 Schrenkiella parvula HOM05D005021 ORTHO05D006824 4.3e-209 731.5 486 76.7
Medtr4g084140 Medicago truncatula HOM05D005021 ORTHO05D006824 7.3e-209 730.7 488 75.2
AT2G35110 Arabidopsis thaliana HOM05D005021 ORTHO05D006824 1.6e-208 729.6 480 76.5
FAN25G1951 Fragaria x ananassa HOM05D005021 ORTHO05D006824 2.8e-208 728.8 485 76.9
Lj4g0005220 Lotus japonicus HOM05D005021 ORTHO05D006824 1.1e-207 726.9 487 75.6
BcaB02g09480 Brassica carinata HOM05D005021 ORTHO05D006824 1.8e-207 726.1 484 75.4
C04p13730 Brassica napus HOM05D005021 ORTHO05D006824 3.1e-207 725.3 484 75.2
A05p10630 Brassica napus HOM05D005021 ORTHO05D006824 5.3e-207 724.5 484 75.2
BolC4t22962H Brassica oleracea HOM05D005021 ORTHO05D006824 6.9e-207 724.2 484 75.2
BraA05t20004Z Brassica rapa HOM05D005021 ORTHO05D006824 6.9e-207 724.2 484 75.2
Ca_18756_v3 Cicer arietinum L. HOM05D005021 ORTHO05D006824 6.9e-207 724.2 486 74.9
BcaB02g09478 Brassica carinata HOM05D005021 ORTHO05D006824 9.0e-207 723.8 484 75.0
Potri.015G124500 Populus trichocarpa HOM05D005021 ORTHO05D006824 2.0e-206 722.6 486 75.7
TAR626G1325 Trochodendron aralioides HOM05D005021 ORTHO05D006824 7.6e-206 720.7 484 76.0
Lalb_Chr16g0385181 Lupinus albus HOM05D005021 ORTHO05D006824 9.9e-206 720.3 470 76.2
DCAR_003775 Daucus carota HOM05D005021 ORTHO05D006824 2.9e-205 718.8 482 77.8
Aa31LG9G16120 Aethionema arabicum HOM05D005021 ORTHO05D006824 1.9e-204 716.1 504 73.0
ClCG01G009560 Citrullus lanatus HOM05D005021 ORTHO05D006824 1.7e-202 709.5 486 74.9
MELO3C021737.2 Cucumis melo HOM05D005021 ORTHO05D006824 3.9e-202 708.4 486 75.3
CsaV3_1G046230 Cucumis sativus L. HOM05D005021 ORTHO05D006824 3.9e-202 708.4 486 75.3
Sed0001856 Sechium edule HOM05D005021 ORTHO05D006824 1.1e-201 706.8 486 75.1
Nn7g38248 Nelumbo nucifera HOM05D005021 ORTHO05D006824 9.6e-201 703.7 522 71.1
PSO675G8902 Papaver somniferum HOM05D005021 ORTHO05D006824 3.5e-195 685.3 480 74.0
EL10Ac9g20953 Beta vulgaris HOM05D005021 ORTHO05D006824 7.9e-195 684.1 484 73.3
arahy.Tifrunner.gnm1.ann1.59QZXR Arachis hypogaea HOM05D005021 ORTHO05D006824 3.0e-194 682.2 486 71.4
Haze_06074 Corylus avellana HOM05D005021 ORTHO05D006824 3.9e-194 681.8 522 70.3
vmacro03526 Vaccinium macrocarpon HOM05D005021 ORTHO05D006824 6.7e-194 681.0 665 58.2
PGR004G0612 Punica granatum HOM05D005021 ORTHO05D006824 2.6e-190 669.1 474 74.3
Sc17g0003700 Simmondsia chinensis HOM05D005021 ORTHO05D006824 1.4e-188 663.3 434 77.6
Zm00001eb405230 Zea mays HOM05D005021 ORTHO05D006824 8.7e-186 654.1 467 72.6
Os08g0544500 Oryza sativa ssp. japonica HOM05D005021 ORTHO05D006824 1.4e-183 646.7 467 71.5
ATR0752G031 Amborella trichopoda HOM05D005021 ORTHO05D006824 9.3e-180 634.0 481 68.0
Lj1A1146G59 Lonicera japonica HOM05D005021 ORTHO05D006824 1.6e-176 623.2 439 74.0
AUR62041742 Chenopodium quinoa HOM05D005021 ORTHO05D006824 6.5e-173 611.3 444 71.6
AUR62037395 Chenopodium quinoa HOM05D005021 ORTHO05D006824 4.2e-172 608.6 464 69.2
Hund09140 Selenicereus undatus HOM05D005021 ORTHO05D006824 2.5e-169 599.4 425 73.2
unitig_748.g8077 Utricularia gibba HOM05D005021 ORTHO05D006824 3.8e-165 585.5 424 71.2
SGA_v2.0_scaffold175G39355 Striga asiatica HOM05D005021 ORTHO05D006824 6.7e-162 574.7 461 67.2
SHI31491 Sapria himalayana HOM05D005021 ORTHO05D006824 1.1e-161 573.9 486 62.1
Manes.16G055900 Manihot esculenta HOM05D005021 ORTHO05D006824 1.5e-161 573.5 349 84.2
AagrBONN_evm.TU.Sc2ySwM_344.1422 Anthoceros agrestis HOM05D005021 ORTHO05D006824 3.4e-145 519.2 466 56.4
HPP92_017178 Vanilla planifolia HOM05D005021 ORTHO05D006824 1.8e-143 513.5 374 70.1
Mapoly0087s0075 Marchantia polymorpha HOM05D005021 ORTHO05D006824 3.8e-141 505.8 431 58.2
SMO367G0195 Selaginella moellendorffii HOM05D005021 ORTHO05D006824 1.1e-140 504.2 439 56.3
Pp3c1_6150 Physcomitrium patens HOM05D005021 ORTHO05D006824 1.2e-134 484.2 429 55.5
Pp3c11_1080 Physcomitrium patens HOM05D005021 ORTHO05D006824 3.5e-134 482.6 431 55.5
CDE05G3601 Ceratophyllum demersum HOM05D005021 ORTHO05D006824 2.8e-131 473.0 467 55.7
Ah.01g015830 Amaranthus hybridus HOM05D005021 ORTHO05D006824 1.2e-129 467.6 569 49.6
SEGI_00319 Sequoiadendron giganteum HOM05D005021 ORTHO05D006824 8.1e-83 312.0 208 73.1
CBR_g30692 Chara braunii HOM05D005021 ORTHO05D006824 7.6e-73 278.9 407 36.9
SGA_v2.0_scaffold88G27325 Striga asiatica HOM05D005021 ORTHO05D006824 8.2e-35 152.5 114 67.5
BcaB07g31175 Brassica carinata HOM05D005021 ORTHO05D006824 2.2e-32 144.4 89 70.8
SEGI_41047 Sequoiadendron giganteum HOM05D005021 ORTHO05D006824 1.2e-30 138.7 157 42.0
Actinidia33676 Actinidia chinensis HOM05D005021 ORTHO05D006824 3.4e-28 130.6 102 69.6
HPP92_017168 Vanilla planifolia HOM05D005021 ORTHO05D006824 5.7e-20 103.2 135 48.9
SEGI_05203 Sequoiadendron giganteum HOM05D005021 ORTHO05D006824 1.5e-15 88.6 49 91.8
Psat5g003360 Pisum sativum HOM05D005021 ORTHO05D006824 2.5e-15 87.8 89 46.1
Lsat_1_v5_gn_2_63641 Lactuca sativa HOM05D005021 ORTHO05D006824 3.6e-14 84.0 45 86.7
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 4.9e-11 73.6 74 51.4


User provided reference genes

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