Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 5.9e-283 976.9 492 100.0
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 3.9e-234 814.7 454 88.3
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 9.6e-225 783.5 488 78.9
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 6.2e-224 780.8 497 78.7
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 7.6e-222 773.9 500 77.8
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 1.3e-221 773.1 497 78.3
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 2.9e-221 771.9 490 78.0
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 1.1e-220 770.0 486 78.2
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 1.1e-220 770.0 487 77.8
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.1e-220 770.0 496 77.6
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 2.4e-220 768.8 492 77.6
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 5.4e-220 767.7 480 79.4
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 9.3e-220 766.9 488 77.9
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 1.6e-219 766.1 485 77.9
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.6e-219 766.1 480 79.2
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.6e-219 764.6 478 79.3
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 6.0e-219 764.2 498 77.5
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 1.3e-218 763.1 482 78.6
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 3.0e-218 761.9 477 78.8
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 5.1e-218 761.1 490 78.0
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 6.7e-218 760.8 484 77.1
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 5.6e-217 757.7 484 76.9
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 7.4e-217 757.3 485 76.7
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 7.4e-217 757.3 497 75.9
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 2.1e-216 755.7 483 77.2
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.7e-216 755.0 481 77.5
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 1.1e-215 753.4 477 77.8
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 1.4e-215 753.1 497 75.5
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 3.1e-215 751.9 495 75.4
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 5.3e-215 751.1 478 78.7
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 5.3e-215 751.1 485 75.5
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 9.0e-215 750.4 477 77.4
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 9.0e-215 750.4 491 75.8
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 9.0e-215 750.4 485 78.4
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 8.4e-213 743.8 490 75.3
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 8.4e-213 743.8 490 75.3
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 1.1e-212 743.4 486 77.0
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 1.4e-212 743.0 478 76.6
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 2.4e-212 742.3 485 75.3
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 3.2e-212 741.9 486 75.7
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 4.2e-212 741.5 489 76.1
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 9.3e-212 740.3 482 76.3
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 2.7e-211 738.8 479 77.0
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 2.7e-211 738.8 491 75.2
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 4.6e-211 738.0 484 76.9
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 6.0e-211 737.6 483 76.4
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 2.3e-210 735.7 489 73.8
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 1.1e-209 733.4 480 76.0
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 2.5e-209 732.3 488 75.0
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 1.3e-208 729.9 494 73.9
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 6.2e-208 727.6 491 73.9
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 6.2e-208 727.6 484 74.4
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 1.1e-207 726.9 485 74.2
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 1.8e-207 726.1 487 74.9
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 2.4e-207 725.7 494 73.5
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 2.4e-207 725.7 485 74.8
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 4.0e-207 724.9 484 76.0
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 9.0e-207 723.8 484 74.4
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 1.2e-206 723.4 482 74.1
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 1.2e-206 723.4 485 75.1
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 2.6e-206 722.2 508 72.2
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 8.4e-205 717.2 480 73.8
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 1.1e-204 716.8 479 74.9
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 1.1e-204 716.8 482 73.4
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 1.1e-204 716.8 479 75.8
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 2.5e-204 715.7 487 73.3
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 5.5e-204 714.5 480 74.4
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 7.1e-204 714.1 488 73.4
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 7.1e-204 714.1 488 73.4
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 1.2e-203 713.4 482 73.4
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 1.2e-203 713.4 479 74.7
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 1.6e-203 713.0 478 74.7
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 2.1e-203 712.6 480 74.0
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 4.6e-203 711.4 480 73.5
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 6.0e-203 711.1 480 74.4
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 7.9e-203 710.7 480 73.5
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 1.0e-202 710.3 487 72.5
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 1.0e-202 710.3 487 72.5
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 1.3e-202 709.9 480 72.9
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 1.3e-202 709.9 483 73.1
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 3.0e-202 708.8 481 73.0
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 3.0e-202 708.8 481 73.0
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 1.1e-201 706.8 488 73.0
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 1.5e-201 706.4 482 74.5
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 1.9e-201 706.1 478 74.5
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 1.9e-201 706.1 493 71.6
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 3.3e-201 705.3 483 72.0
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 5.7e-201 704.5 484 72.5
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 1.3e-200 703.4 480 72.9
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 2.2e-200 702.6 477 74.0
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 2.2e-200 702.6 494 71.5
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 2.2e-200 702.6 494 72.3
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 4.8e-200 701.4 485 71.8
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 1.4e-199 699.9 520 68.7
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 1.4e-199 699.9 510 71.2
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 5.3e-199 698.0 483 72.0
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 5.3e-199 698.0 482 72.8
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 1.7e-197 693.0 490 70.6
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 5.0e-197 691.4 488 72.3
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 1.4e-196 689.9 523 69.0
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.6e-195 686.4 494 69.0
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 2.5e-193 679.1 485 70.5
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 8.2e-192 674.1 490 67.6
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.4e-191 673.3 486 68.5
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 3.4e-190 668.7 487 66.5
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 4.5e-190 668.3 576 60.9
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 1.9e-188 662.9 491 66.2
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 4.4e-185 651.7 490 66.7
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 9.7e-185 650.6 567 61.9
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.7e-184 649.8 496 69.4
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 4.8e-184 648.3 510 66.9
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 9.1e-183 644.0 491 65.2
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 4.5e-182 641.7 483 66.5
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 7.7e-182 641.0 486 69.3
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 6.5e-181 637.9 494 67.8
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 1.4e-180 636.7 480 68.8
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 1.9e-180 636.3 486 65.2
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 2.1e-179 632.9 489 62.6
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 1.1e-177 627.1 499 61.7
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 1.1e-177 627.1 485 66.2
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 5.7e-177 624.8 462 68.2
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 1.6e-174 616.7 488 64.3
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 5.5e-172 608.2 483 61.9
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 2.1e-171 606.3 503 65.4
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.3e-170 602.8 395 76.5
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 5.5e-164 581.6 452 62.4
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 6.8e-154 548.1 508 55.7
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.1e-151 540.8 342 79.5
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.7e-149 533.5 389 71.5
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 4.3e-148 528.9 493 55.6
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 1.8e-146 523.5 381 70.9
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 3.4e-145 519.2 358 74.9
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 1.1e-143 514.2 390 66.7
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 7.0e-143 511.5 393 68.7
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.0e-141 507.7 353 72.5
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 1.1e-138 497.7 538 52.2
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 1.7e-136 490.3 355 71.5
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 1.9e-135 486.9 357 71.1
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.6e-125 451.8 392 63.0
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 4.4e-121 439.1 467 49.9
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 7.6e-121 438.3 301 73.4
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.6e-118 430.6 273 79.1
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 2.8e-115 419.9 294 71.1
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.8e-115 419.1 281 75.1
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 6.4e-112 408.7 279 74.2
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.6e-86 324.3 188 83.0
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 1.0e-85 321.6 236 70.3
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.6e-78 297.7 474 36.3
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 1.8e-77 294.3 237 67.1
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 9.1e-74 282.0 171 78.4
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 3.0e-69 266.9 204 68.6
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 1.2e-62 245.0 200 62.0
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 5.5e-55 219.5 253 49.0
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 8.0e-54 215.7 125 82.4
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 8.0e-54 215.7 228 52.6
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 1.8e-53 214.5 146 74.0
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 1.2e-52 211.8 132 77.3
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 2.6e-52 210.7 138 74.6
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 2.2e-48 197.6 153 67.3
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 5.5e-47 193.0 257 49.8
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.8e-43 180.6 112 75.9
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 4.1e-42 176.8 91 89.0
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 4.1e-42 176.8 91 89.0
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 7.2e-39 166.0 112 72.3
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 2.6e-36 157.5 121 66.1
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 1.9e-31 141.4 213 39.0
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 2.4e-26 124.4 130 54.6
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 1.7e-24 118.2 99 63.6
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 1.5e-23 115.2 69 76.8
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 1.2e-22 112.1 65 81.5
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 2.8e-22 110.9 63 82.5
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.6e-22 110.5 65 84.6
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 1.1e-21 109.0 184 39.7
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.1e-21 107.5 65 81.5
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 3.1e-21 107.5 67 74.6
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 8.9e-21 105.9 65 80.0
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 9.8e-20 102.4 67 73.1
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 8.3e-19 99.4 65 76.9
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.4e-18 97.8 77 68.8
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 4.4e-12 77.0 48 70.8
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 1.0e-08 65.9 38 73.7


User provided reference genes

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