Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 1.2e-253 879.4 478 100.0
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 1.9e-76 290.8 482 45.0
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 1.1e-60 238.4 486 40.3
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 9.5e-60 235.3 504 40.3
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 1.7e-56 224.6 496 37.9
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 1.0e-50 205.3 495 37.0
Oeu058488.1 Olea europaea HOM05D004305 ORTHO05D005159 1.4e-47 194.9 170 74.7
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 1.7e-45 188.0 336 40.8
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 5.0e-45 186.4 476 35.3
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 5.6e-44 183.0 502 34.3
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 8.9e-42 175.6 481 34.7
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 7.3e-36 156.0 502 32.7
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 1.4e-34 151.8 523 31.9
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 4.4e-33 146.7 483 32.7
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 5.8e-33 146.4 491 32.6
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 1.3e-32 145.2 491 32.4
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 4.1e-31 140.2 482 31.5
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 1.2e-30 138.7 472 31.6
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 2.1e-30 137.9 375 34.4
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 3.5e-30 137.1 537 32.8
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 4.3e-28 130.2 492 29.9
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 2.1e-27 127.9 467 30.4
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 5.2e-26 123.2 465 29.7
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 8.9e-26 122.5 489 29.7
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 4.4e-25 120.2 467 30.2
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 9.9e-25 119.0 512 28.9
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 1.3e-24 118.6 457 31.3
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 3.8e-24 117.1 469 31.1
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 1.9e-23 114.8 499 33.3
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 3.2e-23 114.0 457 28.9
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 4.1e-23 113.6 457 29.8
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 2.1e-22 111.3 192 40.6
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 4.6e-22 110.2 499 27.9
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 1.7e-21 108.2 465 29.5
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.3e-21 107.8 479 30.7
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 5.1e-21 106.7 484 28.9
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 6.6e-21 106.3 469 29.2
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 6.6e-21 106.3 327 32.4
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 8.6e-21 105.9 467 28.3
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.5e-20 105.1 476 29.8
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 1.5e-20 105.1 233 35.6
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 1.9e-20 104.8 456 29.2
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 3.3e-20 104.0 378 33.1
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 4.3e-20 103.6 497 28.8
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 5.6e-20 103.2 498 28.7
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 9.6e-20 102.4 245 36.7
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 9.6e-20 102.4 483 28.4
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 9.6e-20 102.4 522 29.9
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 1.2e-19 102.1 491 29.1
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 6.2e-19 99.8 464 29.7
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 6.2e-19 99.8 475 29.5
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 8.1e-19 99.4 477 28.1
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 8.1e-19 99.4 445 29.7
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 5.2e-18 96.7 526 28.1
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 8.9e-18 95.9 476 27.9
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 1.2e-17 95.5 460 30.4
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 1.2e-17 95.5 460 30.4
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 1.5e-17 95.1 472 30.9
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 2.0e-17 94.7 456 30.0
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 2.0e-17 94.7 475 28.2
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 2.0e-17 94.7 492 27.8
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 7.6e-17 92.8 461 29.1
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 7.6e-17 92.8 482 28.2
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 7.6e-17 92.8 540 28.5
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 7.6e-17 92.8 471 27.2
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 9.9e-17 92.4 458 27.3
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 2.2e-16 91.3 483 28.6
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 2.9e-16 90.9 469 29.2
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 4.9e-16 90.1 483 27.7
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 6.4e-16 89.7 157 42.7
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 8.4e-16 89.4 495 27.3
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 1.9e-15 88.2 348 29.6
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.9e-15 88.2 478 26.6
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 2.4e-15 87.8 477 27.9
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 4.2e-15 87.0 478 25.7
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 5.4e-15 86.7 464 26.7
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 7.1e-15 86.3 480 27.3
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 7.1e-15 86.3 481 28.3
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 7.1e-15 86.3 481 27.9
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 9.3e-15 85.9 458 29.0
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 9.3e-15 85.9 469 30.3
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.2e-14 85.5 499 25.5
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 1.6e-14 85.1 184 38.6
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 2.1e-14 84.7 464 31.7
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 3.5e-14 84.0 473 26.6
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 6.0e-14 83.2 497 29.2
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 1.7e-13 81.6 480 28.3
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 2.3e-13 81.3 486 26.5
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 3.9e-13 80.5 455 26.2
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 5.1e-13 80.1 457 27.4
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 6.6e-13 79.7 484 26.0
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 8.7e-13 79.3 462 29.7
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 8.7e-13 79.3 358 30.2
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.1e-12 79.0 171 38.0
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 1.5e-12 78.6 479 26.5
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 1.9e-12 78.2 448 26.8
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 3.3e-12 77.4 354 28.8
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 4.3e-12 77.0 471 26.1
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 7.3e-12 76.3 469 25.6
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 7.3e-12 76.3 469 25.6
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 1.3e-11 75.5 473 25.2
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 1.3e-11 75.5 459 27.7
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 1.6e-11 75.1 479 28.0
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 2.1e-11 74.7 455 25.5
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 2.1e-11 74.7 455 25.5
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 2.1e-11 74.7 358 28.8
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 2.1e-11 74.7 210 33.3
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 2.8e-11 74.3 205 33.7
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 2.8e-11 74.3 199 36.2
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 4.8e-11 73.6 205 33.7
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 4.8e-11 73.6 465 24.5
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 6.2e-11 73.2 550 25.6
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 6.2e-11 73.2 203 34.0
Ca_00869_v3 Cicer arietinum L. HOM05D004305 ORTHO05D005159 1.1e-10 72.4 252 31.7
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 1.4e-10 72.0 485 28.0
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 2.4e-10 71.2 187 34.8
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 2.4e-10 71.2 480 24.8
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 4.0e-10 70.5 478 26.6
Actinidia32347 Actinidia chinensis HOM05D004305 ORTHO05D005159 6.9e-10 69.7 528 24.8
CiPaw.09G142800 Carya illinoinensis HOM05D004305 ORTHO05D005159 2.0e-09 68.2 179 36.9
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 5.8e-09 66.6 89 50.6
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 7.6e-09 66.2 472 25.6
Medtr4g094532 Medicago truncatula HOM05D004305 ORTHO05D005159 9.9e-09 65.9 472 26.3
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 2.9e-08 64.3 68 52.9
Sp2g09190 Schrenkiella parvula HOM05D004305 ORTHO05D005159 2.9e-08 64.3 186 30.6
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 1.9e-07 61.6 98 41.8
Nn2g11492 Nelumbo nucifera HOM05D004305 ORTHO05D005159 3.2e-07 60.8 72 43.1
Psat7g094000 Pisum sativum HOM05D004305 ORTHO05D005159 9.3e-07 59.3 467 25.5
Thhalv10003311m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 3.5e-06 57.4 184 31.5
BcaB07g30950 Brassica carinata HOM05D004305 ORTHO05D005159 4.6e-06 57.0 62 45.2
BraA09t37708Z Brassica rapa HOM05D004305 ORTHO05D005159 4.6e-06 57.0 195 30.3


User provided reference genes

Program Settings