Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 3.4e-36 154.5 77 100.0
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 8.7e-16 86.7 85 58.8
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 6.5e-11 70.5 82 50.0
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 1.1e-10 69.7 82 50.0
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 1.9e-10 68.9 76 53.9
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 2.5e-10 68.6 82 48.8
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 2.5e-10 68.6 82 48.8
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 4.2e-10 67.8 82 50.0
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 5.5e-10 67.4 85 51.8
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 5.5e-10 67.4 84 47.6
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 5.5e-10 67.4 84 48.8
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 7.2e-10 67.0 72 52.8
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 1.6e-09 65.9 85 45.9
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 2.7e-09 65.1 84 45.2
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 2.7e-09 65.1 70 52.9
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 3.6e-09 64.7 84 47.6
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 3.6e-09 64.7 72 51.4
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 4.6e-09 64.3 86 47.7
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 7.9e-09 63.5 85 43.5
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 7.9e-09 63.5 72 54.2
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 1.0e-08 63.2 72 52.8
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 1.0e-08 63.2 74 47.3
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 1.4e-08 62.8 84 46.4
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 1.4e-08 62.8 85 44.7
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 1.4e-08 62.8 75 53.3
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 2.3e-08 62.0 72 51.4
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 3.0e-08 61.6 85 44.7
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 3.0e-08 61.6 85 43.5
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 3.9e-08 61.2 72 52.8
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 3.9e-08 61.2 72 50.0
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 3.9e-08 61.2 83 47.0
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 5.1e-08 60.8 70 50.0
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 6.7e-08 60.5 72 52.8
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 8.8e-08 60.1 85 47.1
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 8.8e-08 60.1 72 51.4
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 1.5e-07 59.3 70 50.0
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 1.5e-07 59.3 82 46.3
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 1.5e-07 59.3 72 50.0
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 1.5e-07 59.3 70 48.6
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 2.0e-07 58.9 70 47.1
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 2.0e-07 58.9 72 44.4
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 2.6e-07 58.5 72 48.6
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 2.6e-07 58.5 72 48.6
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 3.3e-07 58.2 72 48.6
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 3.3e-07 58.2 82 46.3
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 4.4e-07 57.8 70 47.1
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 5.7e-07 57.4 72 47.2
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 7.4e-07 57.0 70 48.6
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 7.4e-07 57.0 59 55.9
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 7.4e-07 57.0 71 49.3
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 9.7e-07 56.6 72 45.8
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 1.3e-06 56.2 70 47.1
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 1.3e-06 56.2 70 48.6
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 2.2e-06 55.5 73 46.6
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 2.2e-06 55.5 81 43.2
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 2.8e-06 55.1 70 47.1
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 4.8e-06 54.3 74 47.3
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 4.8e-06 54.3 73 45.2
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 6.3e-06 53.9 72 48.6
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 8.2e-06 53.5 67 52.2


User provided reference genes

Program Settings