Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060111.1 Olea europaea HOM05D008284 ORTHO05D015224 9.9e-106 386.7 186 100.0
Oeu023891.1 Olea europaea HOM05D008284 ORTHO05D000224 4.8e-60 235.0 132 87.9
Oeu002304.1 Olea europaea HOM05D000004 ORTHO05D000224 2.7e-31 139.4 135 54.8
Oeu033722.1 Olea europaea HOM05D008284 ORTHO05D000034 4.1e-27 125.6 127 47.2
Oeu018629.1 Olea europaea HOM05D008284 ORTHO05D000224 2.5e-24 116.3 259 29.3
Oeu029917.1 Olea europaea HOM05D000004 ORTHO05D000224 2.1e-23 113.2 63 82.5
Oeu022994.1 Olea europaea HOM05D008284 ORTHO05D000224 8.9e-22 107.8 134 47.0
Oeu060665.1 Olea europaea HOM05D008284 ORTHO05D000224 3.1e-19 99.4 122 45.9
Oeu027955.1 Olea europaea HOM05D008284 ORTHO05D000224 4.1e-19 99.0 84 54.8
Oeu048099.1 Olea europaea HOM05D008284 ORTHO05D000034 7.0e-19 98.2 266 27.1
Oeu054732.1 Olea europaea HOM05D008284 ORTHO05D000224 2.3e-17 93.2 84 51.2
Oeu050755.1 Olea europaea HOM05D008284 ORTHO05D000034 5.0e-17 92.0 72 59.7
Oeu019592.1 Olea europaea HOM05D008284 ORTHO05D000224 1.9e-16 90.1 72 56.9
Oeu045669.1 Olea europaea HOM05D008284 ORTHO05D000224 1.9e-16 90.1 71 59.2
Oeu026329.1 Olea europaea HOM05D008284 ORTHO05D000034 2.5e-16 89.7 72 56.9
Oeu047013.1 Olea europaea HOM05D008284 ORTHO05D000034 4.3e-16 89.0 75 56.0
Oeu055711.1 Olea europaea HOM05D008284 ORTHO05D000224 4.3e-16 89.0 72 55.6
Oeu055756.1 Olea europaea HOM05D008284 ORTHO05D000224 4.3e-16 89.0 72 55.6
Oeu047484.1 Olea europaea HOM05D008284 ORTHO05D000034 5.6e-16 88.6 67 58.2
Oeu018857.1 Olea europaea HOM05D000004 ORTHO05D000224 1.2e-15 87.4 129 31.8
Oeu064005.1 Olea europaea HOM05D000004 ORTHO05D000034 1.2e-15 87.4 72 56.9
Oeu045530.1 Olea europaea HOM05D008284 ORTHO05D000224 1.6e-15 87.0 72 55.6
Oeu013930.1 Olea europaea HOM05D008284 ORTHO05D000034 2.1e-15 86.7 69 55.1
Oeu023218.1 Olea europaea HOM05D008284 ORTHO05D000034 2.8e-15 86.3 69 56.5
Oeu009202.1 Olea europaea HOM05D008284 ORTHO05D000224 3.6e-15 85.9 72 54.2
Oeu015644.1 Olea europaea HOM05D008284 ORTHO05D000224 4.7e-15 85.5 72 56.9
Oeu004128.1 Olea europaea HOM05D008284 ORTHO05D000224 6.1e-15 85.1 72 54.2
Oeu018971.1 Olea europaea HOM05D008284 ORTHO05D000224 1.0e-14 84.3 72 55.6
Oeu043006.1 Olea europaea HOM05D008284 ORTHO05D000224 2.6e-13 79.7 72 51.4
Oeu027511.1 Olea europaea HOM05D008284 ORTHO05D000034 9.8e-13 77.8 69 50.7
ClCG04G003440 Citrullus lanatus HOM05D000004 ORTHO05D000034 6.4e-12 75.1 131 35.9
Oeu057181.1 Olea europaea HOM05D008284 ORTHO05D000034 6.4e-12 75.1 53 62.3
Oeu010723.1 Olea europaea HOM05D008284 ORTHO05D000224 2.4e-11 73.2 72 47.2
Oeu018768.1 Olea europaea HOM05D008284 ORTHO05D000224 5.4e-11 72.0 92 40.2
ClCG08G003900 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.7e-10 69.7 125 32.0
Oeu051578.1 Olea europaea HOM05D008284 ORTHO05D000034 4.6e-10 68.9 109 37.6
CANSAT11G1617 Cannabis sativa HOM05D000004 ORTHO05D000034 6.0e-10 68.6 66 45.5
CsaV3_2G012150 Cucumis sativus L. HOM05D029834 ORTHO05D000224 6.0e-10 68.6 84 41.7
Rhsim01G0132500 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.0e-10 68.6 87 34.5
Rhsim10G0033400 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.8e-10 68.2 87 34.5
MELO3C032614.2 Cucumis melo HOM05D007786 ORTHO05D000224 1.7e-09 67.0 70 44.3
Sed0000778 Sechium edule HOM05D000004 ORTHO05D000034 6.6e-09 65.1 58 46.6
Sopen07g005720 Solanum pennellii HOM05D000004 ORTHO05D000034 6.6e-09 65.1 114 28.9
ClCG02G010440 Citrullus lanatus HOM05D000004 ORTHO05D000002 8.6e-09 64.7 104 29.8
Sopen06g018450 Solanum pennellii HOM05D000408 ORTHO05D000034 8.6e-09 64.7 57 47.4
MELO3C029662.2 Cucumis melo HOM05D007786 ORTHO05D009980 2.5e-08 63.2 100 34.0
Sopen10g017820 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-08 62.4 64 42.2
MELO3C033340.2 Cucumis melo HOM05D000539 ORTHO05D000233 5.6e-08 62.0 60 45.0
SHI39499 Sapria himalayana HOM05D000004 ORTHO05D000002 5.6e-08 62.0 219 23.3
Ca_22944_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007648 7.3e-08 61.6 123 30.9
ClCG09G015480 Citrullus lanatus HOM05D007786 ORTHO05D000224 7.3e-08 61.6 104 34.6
MELO3C029130.2 Cucumis melo HOM05D008649 ORTHO05D000224 7.3e-08 61.6 70 41.4
RcHm_v2.0_Chr6g0286381 Rosa chinensis HOM05D021382 ORTHO05D000034 7.3e-08 61.6 38 55.3
MELO3C028093.2 Cucumis melo HOM05D000004 ORTHO05D000034 9.5e-08 61.2 70 41.4
Rhsim11G0064300 Rhododendron simsii HOM05D000004 ORTHO05D000034 9.5e-08 61.2 231 23.4
RcHm_v2.0_Chr5g0009611 Rosa chinensis HOM05D021382 ORTHO05D000034 9.5e-08 61.2 38 55.3
PGSC0003DMG400043927 Solanum tuberosum HOM05D034919 ORTHO05D000034 9.5e-08 61.2 47 46.8
PGSC0003DMG400045601 Solanum tuberosum HOM05D000004 ORTHO05D000034 9.5e-08 61.2 47 48.9
ClCG00G001660 Citrullus lanatus HOM05D007786 ORTHO05D000224 1.2e-07 60.8 75 38.7
Manes.06G011625 Manihot esculenta HOM05D013503 ORTHO05D000224 1.2e-07 60.8 38 57.9
RcHm_v2.0_Chr0c08g0498091 Rosa chinensis HOM05D000004 ORTHO05D000034 1.2e-07 60.8 38 55.3
RcHm_v2.0_Chr7g0197101 Rosa chinensis HOM05D016471 ORTHO05D000034 1.2e-07 60.8 38 55.3
Sopen10g024100 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-07 60.8 57 45.6
Sopen10g024160 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-07 60.8 57 45.6
CSS0037828 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 1.6e-07 60.5 131 26.0
Ca_06828_v3 Cicer arietinum L. HOM05D000004 ORTHO05D009627 1.6e-07 60.5 59 47.5
Sopen03g020900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-07 60.5 57 43.9
MELO3C030797.2 Cucumis melo HOM05D000004 ORTHO05D000002 2.1e-07 60.1 55 50.9
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 2.1e-07 60.1 100 31.0
RcHm_v2.0_Chr2g0090701 Rosa chinensis HOM05D000004 ORTHO05D000002 2.1e-07 60.1 38 55.3
RcHm_v2.0_Chr5g0049881 Rosa chinensis HOM05D000004 ORTHO05D000034 2.1e-07 60.1 38 55.3
RcHm_v2.0_Chr6g0271231 Rosa chinensis HOM05D000004 ORTHO05D000034 2.1e-07 60.1 38 55.3
Sopen07g013130 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-07 60.1 57 43.9
MELO3C030239.2 Cucumis melo HOM05D008649 ORTHO05D009980 2.8e-07 59.7 59 49.2
Dinv21717 Davidia involucrata HOM05D018364 ORTHO05D015224 2.8e-07 59.7 40 52.5
Dinv21718 Davidia involucrata HOM05D018364 ORTHO05D015224 2.8e-07 59.7 40 52.5
Manes.10G004214 Manihot esculenta HOM05D013503 ORTHO05D000224 2.8e-07 59.7 38 55.3
Sopen03g017100 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-07 59.7 57 43.9
Sopen05g015420 Solanum pennellii HOM05D000004 ORTHO05D000034 2.8e-07 59.7 55 45.5
Sopen10g023460 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-07 59.7 55 45.5
PGSC0003DMG400009589 Solanum tuberosum HOM05D000004 ORTHO05D000034 2.8e-07 59.7 57 43.9
Rhsim06G0127900 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.6e-07 59.3 80 38.8
Ca_27233_v3 Cicer arietinum L. HOM05D000004 ORTHO05D009627 4.7e-07 58.9 65 43.1
Hma1.2p1_0866F.1_g230150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.7e-07 58.9 93 34.4
Sopen11g010980 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-07 58.9 47 48.9
PGSC0003DMG400045596 Solanum tuberosum HOM05D008583 ORTHO05D017134 4.7e-07 58.9 59 45.8
Atru.chr11.1364 Acer truncatum HOM05D000004 ORTHO05D000002 6.2e-07 58.5 48 52.1
Ca_12997_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 6.2e-07 58.5 59 44.1
Ca_28466_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 6.2e-07 58.5 36 61.1
Sopen11g022380 Solanum pennellii HOM05D000004 ORTHO05D000034 6.2e-07 58.5 72 38.9
Ca_23948_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.0e-07 58.2 61 37.7
ClCG10G007890 Citrullus lanatus HOM05D000004 ORTHO05D000002 8.0e-07 58.2 128 33.6
MELO3C029619.2 Cucumis melo HOM05D007786 ORTHO05D009980 8.0e-07 58.2 55 49.1
MELO3C034471.2 Cucumis melo HOM05D007786 ORTHO05D009980 8.0e-07 58.2 55 47.3
Hma1.2p1_0142F.1_g064210 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 8.0e-07 58.2 90 35.6
Sopen12g024810 Solanum pennellii HOM05D000004 ORTHO05D000002 8.0e-07 58.2 65 41.5
ATR0218G001 Amborella trichopoda HOM05D000004 ORTHO05D000002 1.1e-06 57.8 129 28.7
BcaC01g03214 Brassica carinata HOM05D012295 ORTHO05D000224 1.1e-06 57.8 94 30.9
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-06 57.8 50 46.0
HanXRQChr01g0007791 Helianthus annuus HOM05D000004 ORTHO05D000002 1.1e-06 57.8 54 42.6
Oeu051746.1 Olea europaea HOM05D000004 ORTHO05D000224 1.1e-06 57.8 89 33.7
Rhsim09G0094400 Rhododendron simsii HOM05D020422 ORTHO05D030533 1.1e-06 57.8 150 26.7
Rhsim09G0094500 Rhododendron simsii HOM05D020422 ORTHO05D030533 1.1e-06 57.8 150 26.7
RcHm_v2.0_Chr3g0497221 Rosa chinensis HOM05D021382 ORTHO05D000034 1.1e-06 57.8 38 57.9
Sopen02g001250 Solanum pennellii HOM05D000004 ORTHO05D000034 1.1e-06 57.8 136 23.5
Sopen10g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 57.8 55 43.6
Ca_28406_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-06 57.4 84 33.3
MELO3C033733.2 Cucumis melo HOM05D000004 ORTHO05D000224 1.4e-06 57.4 57 43.9
Manes.16G063550 Manihot esculenta HOM05D013503 ORTHO05D000224 1.4e-06 57.4 38 52.6
Oeu051352.1 Olea europaea HOM05D000004 ORTHO05D000224 1.4e-06 57.4 69 36.2
PGR031G1649 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 57.4 68 38.2
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 1.4e-06 57.4 68 38.2
RcHm_v2.0_Chr2g0168091 Rosa chinensis HOM05D000004 ORTHO05D000002 1.4e-06 57.4 38 50.0
Thecc.07G177700 Theobroma cacao HOM05D056800 ORTHO05D051436 1.4e-06 57.4 50 42.0
Ca_13228_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007648 1.8e-06 57.0 63 42.9
Ca_31139_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 1.8e-06 57.0 65 43.1
HanXRQChr03g0071711 Helianthus annuus HOM05D000004 ORTHO05D000002 1.8e-06 57.0 94 29.8
Oeu000946.1 Olea europaea HOM05D000004 ORTHO05D000224 1.8e-06 57.0 69 36.2
Sabra15G0065900 Salix brachista HOM05D011124 ORTHO05D000224 1.8e-06 57.0 66 36.4
Sopen05g011770 Solanum pennellii HOM05D000004 ORTHO05D000034 1.8e-06 57.0 64 43.8
Sopen05g027980 Solanum pennellii HOM05D010553 ORTHO05D000034 1.8e-06 57.0 61 39.3
ATR0885G001 Amborella trichopoda HOM05D000004 ORTHO05D000034 2.3e-06 56.6 36 55.6
arahy.Tifrunner.gnm1.ann1.SV62YW Arachis hypogaea HOM05D000004 ORTHO05D000002 2.3e-06 56.6 56 44.6
CANSAT01G2289 Cannabis sativa HOM05D000004 ORTHO05D000002 2.3e-06 56.6 36 55.6
CANSAT01G3174 Cannabis sativa HOM05D000004 ORTHO05D000002 2.3e-06 56.6 37 59.5
CANSAT25G3752 Cannabis sativa HOM05D000004 ORTHO05D000002 2.3e-06 56.6 36 55.6
CANSAT64G2084 Cannabis sativa HOM05D000004 ORTHO05D000002 2.3e-06 56.6 36 55.6
Ca_14462_v3 Cicer arietinum L. HOM05D001879 ORTHO05D000002 2.3e-06 56.6 64 43.8
Ca_14584_v3 Cicer arietinum L. HOM05D000004 ORTHO05D009627 2.3e-06 56.6 80 37.5
Ca_20160_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 2.3e-06 56.6 64 43.8
Ca_31155_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 2.3e-06 56.6 64 43.8
ClCG01G012390 Citrullus lanatus HOM05D000004 ORTHO05D000034 2.3e-06 56.6 117 34.2
MELO3C032168.2 Cucumis melo HOM05D007786 ORTHO05D000224 2.3e-06 56.6 82 37.8
Oeu004346.1 Olea europaea HOM05D000004 ORTHO05D000002 2.3e-06 56.6 52 42.3
Sabra15G0035900 Salix brachista HOM05D011124 ORTHO05D000224 2.3e-06 56.6 66 36.4
Sabra15G0074700 Salix brachista HOM05D011124 ORTHO05D000224 2.3e-06 56.6 66 36.4
Sabra16G0105500 Salix brachista HOM05D011124 ORTHO05D000224 2.3e-06 56.6 66 36.4
Sabra17G0061900 Salix brachista HOM05D011124 ORTHO05D000224 2.3e-06 56.6 66 36.4
Sabra18G0007400 Salix brachista HOM05D011124 ORTHO05D000224 2.3e-06 56.6 66 36.4
Sabra19G0052300 Salix brachista HOM05D011124 ORTHO05D000224 2.3e-06 56.6 66 36.4
Sopen11g018460 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-06 56.6 57 43.9
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-06 56.2 50 40.0
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-06 56.2 50 40.0
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-06 56.2 50 40.0
MELO3C033978.2 Cucumis melo HOM05D008649 ORTHO05D000034 3.1e-06 56.2 70 40.0
ECA232G4800 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-06 56.2 57 42.1
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.1e-06 56.2 113 26.5
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.1e-06 56.2 35 54.3
PGSC0003DMG400038636 Solanum tuberosum HOM05D000004 ORTHO05D000034 3.1e-06 56.2 45 48.9
BcaC05g26456 Brassica carinata HOM05D012295 ORTHO05D000224 4.0e-06 55.8 95 32.6
CANSAT21G2422 Cannabis sativa HOM05D000004 ORTHO05D000034 4.0e-06 55.8 60 45.0
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.0e-06 55.8 89 31.5
Nitab4.5_0000687g0230 Nicotiana tabacum HOM05D015050 ORTHO05D017083 4.0e-06 55.8 55 36.4
Oeu015918.1 Olea europaea HOM05D009054 ORTHO05D000034 4.0e-06 55.8 187 22.5
Sopen08g010350 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-06 55.8 61 39.3
Sopen10g024040 Solanum pennellii HOM05D000004 ORTHO05D000034 4.0e-06 55.8 57 42.1
Ca_09349_v3 Cicer arietinum L. HOM05D000083 ORTHO05D002968 5.2e-06 55.5 65 41.5
Dinv01616 Davidia involucrata HOM05D018364 ORTHO05D015224 5.2e-06 55.5 40 50.0
HanXRQChr15g0478291 Helianthus annuus HOM05D000004 ORTHO05D000224 5.2e-06 55.5 62 38.7
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.2e-06 55.5 44 45.5
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 5.2e-06 55.5 113 26.5
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 5.2e-06 55.5 44 45.5
Rhsim13G0139200 Rhododendron simsii HOM05D002352 ORTHO05D000224 5.2e-06 55.5 131 28.2
Sopen07g020510 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-06 55.5 38 52.6
Sopen11g020890 Solanum pennellii HOM05D000004 ORTHO05D000034 5.2e-06 55.5 52 42.3
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.8e-06 55.1 50 40.0
CANSAT25G3651 Cannabis sativa HOM05D000004 ORTHO05D000002 6.8e-06 55.1 37 56.8
ECA236G3573 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.8e-06 55.1 54 42.6
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 6.8e-06 55.1 63 39.7
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 6.8e-06 55.1 37 54.1
Sabra15G0062900 Salix brachista HOM05D011124 ORTHO05D000224 6.8e-06 55.1 66 36.4
Sopen07g019740 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-06 55.1 57 42.1
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 8.9e-06 54.7 74 32.4
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 8.9e-06 54.7 52 38.5
CANSAT11G1607 Cannabis sativa HOM05D000004 ORTHO05D000034 8.9e-06 54.7 123 28.5
Oeu061980.1 Olea europaea HOM05D000004 ORTHO05D000224 8.9e-06 54.7 63 36.5
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 8.9e-06 54.7 35 54.3
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 8.9e-06 54.7 35 54.3
Sabra18G0122200 Salix brachista HOM05D011124 ORTHO05D000224 8.9e-06 54.7 66 34.8
SHI33345 Sapria himalayana HOM05D000004 ORTHO05D000002 8.9e-06 54.7 67 37.3
Sopen04g013760 Solanum pennellii HOM05D000004 ORTHO05D000034 8.9e-06 54.7 37 54.1
Sopen04g020470 Solanum pennellii HOM05D000004 ORTHO05D000034 8.9e-06 54.7 57 40.4
PGSC0003DMG400041195 Solanum tuberosum HOM05D000004 ORTHO05D000034 8.9e-06 54.7 36 52.8


User provided reference genes

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