Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu060052.2 Olea europaea HOM05D004429 ORTHO05D005583 2.3e-151 538.9 275 100.0
Oeu024364.1 Olea europaea HOM05D004429 ORTHO05D005583 1.9e-92 343.2 235 80.9
SalBow3G1038 Salvia bowleyana HOM05D004429 ORTHO05D005583 5.2e-71 271.9 239 63.2
Dinv37207 Davidia involucrata HOM05D004429 ORTHO05D005583 1.4e-68 263.8 211 68.2
Migut.J00365 Erythranthe guttata HOM05D004429 ORTHO05D005583 7.1e-68 261.5 231 64.5
CSS0012060 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 2.7e-67 259.6 212 65.6
SGA_v2.0_scaffold126G33824 Striga asiatica HOM05D004429 ORTHO05D005583 2.3e-66 256.5 242 62.0
Prupe.6G250000 Prunus persica HOM05D004429 ORTHO05D005583 1.4e-63 247.3 208 63.5
CiPaw.10G142900 Carya illinoinensis HOM05D004429 ORTHO05D005583 4.0e-63 245.7 225 62.2
CSS0043629 Camellia sinensis var. sinensis HOM05D004429 ORTHO05D005583 5.3e-63 245.4 217 60.8
Cc06_g03000 Coffea canephora HOM05D004429 ORTHO05D005583 6.9e-63 245.0 220 64.1
QL07p047160 Quercus lobata HOM05D004429 ORTHO05D005583 2.6e-62 243.0 224 63.4
MSTRG.19104 Avicennia marina HOM05D004429 ORTHO05D005583 5.8e-62 241.9 212 63.2
Lj2C100T9 Lonicera japonica HOM05D004429 ORTHO05D005583 5.8e-62 241.9 215 64.2
GSVIVG01025623001 Vitis vinifera HOM05D004429 ORTHO05D005583 5.8e-62 241.9 216 65.7
MSTRG.5688 Avicennia marina HOM05D004429 ORTHO05D005583 9.9e-62 241.1 222 61.3
QL05p010485 Quercus lobata HOM05D004429 ORTHO05D005583 3.8e-61 239.2 215 63.7
Hma1.2p1_0350F.1_g132400 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 8.4e-61 238.0 214 67.3
Hma1.2p1_1065F.1_g253770 Hydrangea macrophylla HOM05D004429 ORTHO05D005583 8.4e-61 238.0 214 67.3
DCAR_014836 Daucus carota HOM05D004429 ORTHO05D005583 3.2e-60 236.1 213 63.4
TWI53G0393 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 4.2e-60 235.7 212 63.2
FvH4_6g14340 Fragaria vesca HOM05D004429 ORTHO05D005583 2.7e-59 233.0 216 63.4
FAN14G5191 Fragaria x ananassa HOM05D004429 ORTHO05D005583 2.7e-59 233.0 216 63.4
Nitab4.5_0000216g0050 Nicotiana tabacum HOM05D004429 ORTHO05D005583 1.0e-58 231.1 208 65.9
RcHm_v2.0_Chr3g0467391 Rosa chinensis HOM05D004429 ORTHO05D005583 1.0e-58 231.1 215 65.6
Duzib106G0640 Durio zibethinus HOM05D004429 ORTHO05D005583 1.7e-58 230.3 213 62.4
FAN02G4491 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.7e-58 230.3 216 63.4
Sopen10g034060 Solanum pennellii HOM05D004429 ORTHO05D005583 2.3e-58 229.9 218 63.3
PGSC0003DMG400008931 Solanum tuberosum HOM05D004429 ORTHO05D005583 2.3e-58 229.9 218 63.3
MD12G1138000 Malus domestica HOM05D004429 ORTHO05D005583 3.0e-58 229.6 212 64.6
Peaxi162Scf00604g00415 Petunia axillaris HOM05D004429 ORTHO05D005583 6.6e-58 228.4 216 63.0
FAN09G1286 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.1e-57 227.6 216 62.5
PGR004G1112 Punica granatum HOM05D004429 ORTHO05D005583 1.1e-57 227.6 222 60.4
Thecc.05G044800 Theobroma cacao HOM05D004429 ORTHO05D005583 7.3e-57 224.9 213 62.0
ClCG10G020910 Citrullus lanatus HOM05D004429 ORTHO05D005583 9.6e-57 224.6 214 61.7
MD04G1120700 Malus domestica HOM05D004429 ORTHO05D005583 2.1e-56 223.4 214 61.7
Solyc10g084620.3 Solanum lycopersicum HOM05D004429 ORTHO05D005583 2.1e-56 223.4 218 61.5
Solyc09g010390.2 Solanum lycopersicum HOM05D004429 ORTHO05D005583 3.6e-56 222.6 223 61.4
CAN.G97.23 Capsicum annuum HOM05D004429 ORTHO05D005583 6.2e-56 221.9 218 59.2
MBI14_g36720_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 1.1e-55 221.1 213 60.6
TWI74G1196 Tripterygium wilfordii HOM05D004429 ORTHO05D005583 1.1e-55 221.1 208 60.1
TAR369G0217 Trochodendron aralioides HOM05D004429 ORTHO05D005583 1.4e-55 220.7 209 60.3
COL.COLO4_14858 Corchorus olitorius HOM05D004429 ORTHO05D005583 2.4e-55 219.9 216 63.4
Nitab4.5_0000202g0130 Nicotiana tabacum HOM05D004429 ORTHO05D005583 5.3e-55 218.8 194 68.6
Gohir.D11G344900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 6.9e-55 218.4 213 61.0
Gorai.007G375300 Gossypium raimondii HOM05D004429 ORTHO05D005583 6.9e-55 218.4 213 61.0
Sed0001771 Sechium edule HOM05D004429 ORTHO05D005583 9.0e-55 218.0 214 61.7
Ciclev10013673m.g Citrus clementina HOM05D004429 ORTHO05D005583 1.2e-54 217.6 212 59.0
FAN05G1703 Fragaria x ananassa HOM05D004429 ORTHO05D005583 1.2e-54 217.6 203 62.1
Gohir.A11G326000 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.2e-54 217.6 213 60.6
Gohir.A09G158500 Gossypium hirsutum HOM05D004429 ORTHO05D005583 7.6e-54 214.9 215 58.1
Gohir.D09G153900 Gossypium hirsutum HOM05D004429 ORTHO05D005583 1.3e-53 214.2 215 58.1
MELO3C009280.2 Cucumis melo HOM05D004429 ORTHO05D005583 2.2e-53 213.4 221 56.1
Nitab4.5_0012047g0010 Nicotiana tabacum HOM05D004429 ORTHO05D005583 2.2e-53 213.4 206 61.2
CAN.G688.9 Capsicum annuum HOM05D004429 ORTHO05D005583 3.8e-53 212.6 223 57.8
Gorai.006G175400 Gossypium raimondii HOM05D004429 ORTHO05D005583 3.8e-53 212.6 215 57.7
Potri.006G082400 Populus trichocarpa HOM05D004429 ORTHO05D005583 3.8e-53 212.6 205 60.0
PGSC0003DMG400010996 Solanum tuberosum HOM05D004429 ORTHO05D005583 4.9e-53 212.2 169 66.9
Sc20g0004500 Simmondsia chinensis HOM05D004429 ORTHO05D005583 6.4e-53 211.8 224 56.2
AUR62013875 Chenopodium quinoa HOM05D004429 ORTHO05D005583 1.1e-52 211.1 229 58.1
PSO339G1692 Papaver somniferum HOM05D004429 ORTHO05D005583 1.1e-52 211.1 222 56.8
Nn2g10451 Nelumbo nucifera HOM05D004429 ORTHO05D005583 2.4e-52 209.9 210 62.4
Nn2g12909 Nelumbo nucifera HOM05D004429 ORTHO05D005583 2.4e-52 209.9 212 58.0
Manes.12G146400 Manihot esculenta HOM05D004429 ORTHO05D005583 4.2e-52 209.1 212 58.0
Ah.01g015860 Amaranthus hybridus HOM05D004429 ORTHO05D005583 5.5e-52 208.8 231 54.1
PSO648G0090 Papaver somniferum HOM05D004429 ORTHO05D005583 5.5e-52 208.8 222 56.3
CsaV3_3G035100 Cucumis sativus L. HOM05D004429 ORTHO05D005583 9.3e-52 208.0 211 55.5
Thhalv10010743m.g Eutrema salsugineum HOM05D004429 ORTHO05D005583 9.3e-52 208.0 217 53.0
Sopen09g005130 Solanum pennellii HOM05D004429 ORTHO05D005583 9.3e-52 208.0 242 56.2
AL5G34580 Arabidopsis lyrata HOM05D004429 ORTHO05D005583 1.2e-51 207.6 211 55.0
Lsat_1_v5_gn_6_32421 Lactuca sativa HOM05D004429 ORTHO05D005583 1.2e-51 207.6 226 56.6
AT3G53630 Arabidopsis thaliana HOM05D004429 ORTHO05D005583 1.6e-51 207.2 212 55.7
Eucgr.K03161 Eucalyptus grandis HOM05D004429 ORTHO05D005583 1.6e-51 207.2 230 56.1
Sp5g08720 Schrenkiella parvula HOM05D004429 ORTHO05D005583 1.6e-51 207.2 212 54.2
Sabra06G0062200 Salix brachista HOM05D004429 ORTHO05D005583 2.7e-51 206.5 205 59.0
ATR0222G016 Amborella trichopoda HOM05D004429 ORTHO05D005583 3.5e-51 206.1 214 54.2
EL10Ac1g02077 Beta vulgaris HOM05D004429 ORTHO05D005583 3.5e-51 206.1 219 56.6
HanXRQChr14g0459271 Helianthus annuus HOM05D004429 ORTHO05D005583 3.5e-51 206.1 218 55.5
Carub.0005s2021 Capsella rubella HOM05D004429 ORTHO05D005583 4.6e-51 205.7 211 54.5
Nitab4.5_0002077g0140 Nicotiana tabacum HOM05D004429 ORTHO05D005583 4.6e-51 205.7 165 66.7
BraA09t40127Z Brassica rapa HOM05D004429 ORTHO05D005583 6.0e-51 205.3 215 55.3
CARHR163560 Cardamine hirsuta HOM05D004429 ORTHO05D005583 6.0e-51 205.3 216 53.2
Aa31LG5G22900 Aethionema arabicum HOM05D004429 ORTHO05D005583 7.9e-51 204.9 223 55.6
Duzib128G1460 Durio zibethinus HOM05D004429 ORTHO05D005583 7.9e-51 204.9 217 59.0
Sed0027367 Sechium edule HOM05D004429 ORTHO05D005583 1.0e-50 204.5 207 57.5
THA.LOC104823424 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 1.3e-50 204.1 215 55.8
Aa31LG10G9470 Aethionema arabicum HOM05D004429 ORTHO05D005583 6.7e-50 201.8 204 53.4
THA.LOC104806580 Tarenaya hassleriana HOM05D004429 ORTHO05D005583 6.7e-50 201.8 216 55.1
A09p46640 Brassica napus HOM05D004429 ORTHO05D005583 2.5e-49 199.9 215 54.0
unitig_578.g15706 Utricularia gibba HOM05D004429 ORTHO05D005583 3.3e-49 199.5 222 51.8
Lsat_1_v5_gn_2_110581 Lactuca sativa HOM05D004429 ORTHO05D005583 4.3e-49 199.1 219 55.7
BolC8t50499H Brassica oleracea HOM05D004429 ORTHO05D005583 1.3e-48 197.6 216 55.1
Aqoxy2G02012 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 8.1e-48 194.9 214 58.4
AUR62036719 Chenopodium quinoa HOM05D004429 ORTHO05D005583 8.1e-48 194.9 170 64.7
arahy.Tifrunner.gnm1.ann1.2JSS8R Arachis hypogaea HOM05D004429 ORTHO05D005583 5.3e-47 192.2 161 60.9
C08p28960 Brassica napus HOM05D004429 ORTHO05D005583 9.0e-47 191.4 215 54.4
CiPaw.09G188700 Carya illinoinensis HOM05D004429 ORTHO05D005583 1.5e-46 190.7 215 50.7
BcaC07g39724 Brassica carinata HOM05D004429 ORTHO05D005583 2.6e-46 189.9 214 54.2
BcaC02g09143 Brassica carinata HOM05D004429 ORTHO05D005583 1.0e-45 188.0 220 51.4
C04p38880 Brassica napus HOM05D001071 ORTHO05D005583 1.0e-45 188.0 220 52.3
BolC4t25460H Brassica oleracea HOM05D004429 ORTHO05D005583 1.0e-45 188.0 220 51.4
CDE04G3062 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 1.3e-45 187.6 199 55.3
Migut.L01619 Erythranthe guttata HOM05D004429 ORTHO05D005583 1.7e-45 187.2 195 58.5
BcaB02g08517 Brassica carinata HOM05D004429 ORTHO05D005583 4.9e-45 185.7 213 52.1
Atru.chr8.1930 Acer truncatum HOM05D004429 ORTHO05D005583 1.1e-44 184.5 153 66.0
Lalb_Chr20g0113181 Lupinus albus HOM05D004429 ORTHO05D005583 1.4e-44 184.1 218 51.8
BcaB01g00258 Brassica carinata HOM05D004429 ORTHO05D005583 2.5e-44 183.3 217 51.2
BraA04t16299Z Brassica rapa HOM05D001071 ORTHO05D005583 2.5e-44 183.3 218 51.4
A04p05960 Brassica napus HOM05D004429 ORTHO05D005583 9.3e-44 181.4 217 51.6
ECA233G0195 Erigeron canadensis HOM05D004429 ORTHO05D005583 2.1e-43 180.3 209 53.6
SGA_v2.0_scaffold87G27174 Striga asiatica HOM05D004429 ORTHO05D005583 5.1e-42 175.6 150 62.7
Phvul.001G170200 Phaseolus vulgaris HOM05D004429 ORTHO05D005583 6.7e-42 175.3 218 48.2
Glyma.19G173500 Glycine max HOM05D004429 ORTHO05D005583 1.9e-41 173.7 223 47.1
SHI12608 Sapria himalayana HOM05D004429 ORTHO05D000003 7.4e-41 171.8 217 47.0
Glyma.03G172600 Glycine max HOM05D004429 ORTHO05D005583 9.0e-39 164.9 223 45.3
VMungo1383G1968 Vigna mungo HOM05D004429 ORTHO05D005583 1.3e-37 161.0 199 48.2
unitig_26.g9203 Utricularia gibba HOM05D004429 ORTHO05D005583 5.0e-37 159.1 158 55.1
COL.COLO4_24433 Corchorus olitorius HOM05D004429 ORTHO05D005583 2.1e-35 153.7 139 63.3
ATR0222G031 Amborella trichopoda HOM05D004429 ORTHO05D005583 3.5e-35 152.9 189 47.1
Rhsim05G0188000 Rhododendron simsii HOM05D004429 ORTHO05D005583 3.5e-35 152.9 146 58.9
HPP92_001685 Vanilla planifolia HOM05D004429 ORTHO05D005583 5.7e-33 145.6 220 44.5
SEGI_33598 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 2.2e-32 143.7 218 44.5
Lj1g0006432 Lotus japonicus HOM05D004429 ORTHO05D005583 2.8e-32 143.3 224 43.8
QL01p033097 Quercus lobata HOM05D004429 ORTHO05D005583 8.2e-32 141.7 212 40.1
Zm00001eb012690 Zea mays HOM05D004429 ORTHO05D005583 9.0e-31 138.3 241 39.8
Medtr7g099970 Medicago truncatula HOM05D004429 ORTHO05D005583 1.2e-30 137.9 223 38.6
Os03g0279600 Oryza sativa ssp. japonica HOM05D004429 ORTHO05D005583 1.3e-29 134.4 239 39.3
MBI18_g47300_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 2.5e-28 130.2 126 59.5
TPR.G11987 Trifolium pratense HOM05D004429 ORTHO05D005583 2.5e-28 130.2 205 39.5
Aqoxy3G04288 Aquilegia oxysepala HOM05D004429 ORTHO05D005583 3.2e-28 129.8 103 61.2
SEGI_08514 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 1.2e-27 127.9 202 39.6
MBI06_g43519_MAGBIO Magnolia biondii HOM05D004429 ORTHO05D005583 2.1e-27 127.1 126 58.7
Atru.chr7.899 Acer truncatum HOM05D004429 ORTHO05D005583 2.7e-27 126.7 118 55.9
Ciclev10029396m.g Citrus clementina HOM05D004429 ORTHO05D005583 1.0e-26 124.8 172 41.9
DCAR_017884 Daucus carota HOM05D004429 ORTHO05D005583 1.4e-26 124.4 212 42.0
Haze_24041 Corylus avellana HOM05D004429 ORTHO05D005583 3.0e-26 123.2 195 37.9
Ca_08790_v3 Cicer arietinum L. HOM05D004429 ORTHO05D005583 6.7e-26 122.1 214 38.3
Actinidia05294 Actinidia chinensis HOM05D004429 ORTHO05D005583 2.2e-24 117.1 100 60.0
CBR_g20121 Chara braunii HOM05D004429 ORTHO05D005583 1.4e-23 114.4 88 53.4
Atru.chr3.3828 Acer truncatum HOM05D004429 ORTHO05D005583 3.1e-23 113.2 138 41.3
CDE07G1713 Ceratophyllum demersum HOM05D004429 ORTHO05D005583 9.1e-23 111.7 198 38.9
SGA_v2.0_scaffold32G13323 Striga asiatica HOM05D004429 ORTHO05D005583 2.0e-22 110.5 104 62.5
SMO348G0079 Selaginella moellendorffii HOM05D004429 ORTHO05D005583 4.2e-20 102.8 84 48.8
Mapoly0066s0057 Marchantia polymorpha HOM05D004429 ORTHO05D005583 5.5e-20 102.4 99 49.5
Psat3g048680 Pisum sativum HOM05D004429 ORTHO05D005583 3.6e-19 99.8 224 32.6
Pp3c9_19700 Physcomitrium patens HOM05D004429 ORTHO05D005583 7.9e-19 98.6 131 38.2
SEGI_24259 Sequoiadendron giganteum HOM05D004429 ORTHO05D005583 7.9e-19 98.6 177 35.0
Pp3c15_19860 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.4e-18 97.8 126 38.9
EL10Ac5g11422 Beta vulgaris HOM05D004429 ORTHO05D005583 1.1e-17 94.7 118 53.4
Pp3c4_10520 Physcomitrium patens HOM05D004429 ORTHO05D005583 1.1e-17 94.7 84 48.8
SGA_v2.0_scaffold61G21134 Striga asiatica HOM05D004429 ORTHO05D005583 5.7e-17 92.4 175 42.3
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 6.3e-16 89.0 119 52.1
Sopen04g022580 Solanum pennellii HOM05D004429 ORTHO05D005583 9.1e-15 85.1 203 36.0
TPR.G8932 Trifolium pratense HOM05D004429 ORTHO05D005583 7.7e-14 82.0 104 41.3
TPR.G14114 Trifolium pratense HOM05D004429 ORTHO05D005583 3.6e-11 73.2 116 39.7
Oeu041536.1 Olea europaea HOM05D004429 ORTHO05D288779 4.5e-06 56.2 149 33.6


User provided reference genes

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