Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 8.7e-64 246.9 133 100.0
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 5.0e-43 177.9 133 69.2
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 1.2e-41 173.3 133 72.2
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 3.0e-40 168.7 126 70.6
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 3.0e-40 168.7 130 70.0
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 3.9e-40 168.3 138 69.6
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 3.9e-40 168.3 133 69.2
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 3.9e-40 168.3 130 70.0
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 6.7e-40 167.5 132 71.2
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 1.5e-39 166.4 130 68.5
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.0e-39 166.0 132 68.9
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 2.2e-38 162.5 125 70.4
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 3.7e-38 161.8 128 68.8
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 6.3e-38 161.0 145 62.8
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 3.1e-37 158.7 125 65.6
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 4.1e-37 158.3 125 68.0
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 9.1e-37 157.1 128 65.6
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 1.2e-36 156.8 123 65.0
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.0e-36 156.0 128 67.2
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 3.5e-36 155.2 131 61.1
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 5.9e-36 154.5 127 62.2
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 1.0e-35 153.7 129 62.0
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 1.7e-35 152.9 132 57.6
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 2.2e-35 152.5 117 68.4
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 6.5e-35 151.0 132 57.6
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 4.2e-34 148.3 126 57.9
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 4.2e-34 148.3 128 63.3
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 5.5e-34 147.9 127 61.4
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 5.5e-34 147.9 129 58.1
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 1.2e-33 146.7 125 60.0
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.2e-33 146.7 127 58.3
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 2.1e-33 146.0 114 64.9
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 3.6e-33 145.2 132 60.6
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 6.1e-33 144.4 125 63.2
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.4e-32 143.3 124 60.5
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.8e-32 142.9 129 55.8
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.8e-32 142.9 125 58.4
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 2.3e-32 142.5 125 59.2
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 2.3e-32 142.5 129 56.6
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.0e-32 142.1 127 61.4
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 5.2e-32 141.4 132 55.3
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 5.2e-32 141.4 127 60.6
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 6.8e-32 141.0 124 59.7
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 6.8e-32 141.0 130 59.2
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 8.8e-32 140.6 129 55.0
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 1.5e-31 139.8 126 59.5
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.0e-31 139.4 129 55.0
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 2.0e-31 139.4 126 55.6
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 2.0e-31 139.4 126 55.6
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 2.0e-31 139.4 127 60.6
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 2.6e-31 139.0 124 59.7
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 3.4e-31 138.7 130 59.2
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 4.4e-31 138.3 128 57.0
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 7.5e-31 137.5 130 56.9
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 7.5e-31 137.5 130 56.9
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 7.5e-31 137.5 122 59.8
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 7.5e-31 137.5 124 58.9
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 9.7e-31 137.1 124 60.5
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 9.7e-31 137.1 124 58.1
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.3e-30 136.7 128 57.8
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 1.7e-30 136.3 130 56.2
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 2.2e-30 136.0 124 57.3
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 2.8e-30 135.6 122 58.2
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.8e-30 135.6 139 56.1
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 3.7e-30 135.2 130 56.2
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 4.8e-30 134.8 130 57.7
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 8.3e-30 134.0 122 58.2
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 8.3e-30 134.0 135 50.4
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 8.3e-30 134.0 126 57.9
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.4e-29 133.3 139 54.0
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 3.1e-29 132.1 131 55.7
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 3.1e-29 132.1 130 56.2
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 3.1e-29 132.1 130 55.4
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 4.1e-29 131.7 123 53.7
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 4.1e-29 131.7 130 54.6
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 5.3e-29 131.3 124 55.6
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 5.3e-29 131.3 159 51.6
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 7.0e-29 131.0 124 51.6
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 9.1e-29 130.6 129 55.0
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 9.1e-29 130.6 129 55.0
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 9.1e-29 130.6 129 55.0
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 9.1e-29 130.6 154 50.0
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.6e-28 129.8 130 55.4
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 2.0e-28 129.4 127 58.3
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 2.7e-28 129.0 126 54.0
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 3.5e-28 128.6 126 55.6
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 1.0e-27 127.1 141 51.1
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 8.5e-27 124.0 121 56.2
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 1.1e-26 123.6 126 53.2
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 7.2e-26 120.9 124 49.2
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 7.2e-26 120.9 127 51.2
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.2e-25 120.2 104 61.5
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 1.2e-25 120.2 125 50.4
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 1.2e-25 120.2 131 49.6
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 4.7e-25 118.2 127 49.6
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 1.4e-24 116.7 81 72.8
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 4.0e-24 115.2 127 48.8
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 3.4e-23 112.1 99 54.5
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 4.8e-22 108.2 79 67.1
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 6.3e-22 107.8 157 43.9
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 4.1e-21 105.1 109 51.4
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 1.6e-20 103.2 81 59.3
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 6.6e-19 97.8 81 56.8
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 1.9e-18 96.3 75 60.0
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 1.2e-15 87.0 123 44.7
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 1.5e-15 86.7 123 43.1
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 8.3e-14 80.9 124 39.5
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 8.3e-14 80.9 124 38.7
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 1.8e-13 79.7 99 46.5
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 2.7e-12 75.9 96 39.6
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 6.6e-11 71.2 100 44.0
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 6.6e-11 71.2 100 44.0
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 1.1e-10 70.5 117 36.8
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 1.5e-10 70.1 89 46.1
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 1.2e-09 67.0 89 44.9
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 1.6e-09 66.6 89 44.9
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 1.6e-09 66.6 79 45.6
Actinidia40026 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.1e-09 66.2 65 58.5
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 3.6e-09 65.5 91 44.0
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 8.9e-08 60.8 48 64.6
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 2.2e-06 56.2 40 60.0


User provided reference genes

Program Settings