Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 3.3e-187 658.3 354 100.0
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 4.6e-144 515.0 356 76.4
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 8.4e-138 494.2 357 76.5
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 2.7e-136 489.2 358 73.5
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 8.7e-119 431.0 389 66.8
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 7.4e-118 427.9 363 69.1
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 9.6e-118 427.6 360 67.8
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 1.4e-116 423.7 360 69.4
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 1.4e-113 413.7 366 68.6
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 1.6e-112 410.2 366 66.9
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.8e-111 406.8 362 68.2
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 5.1e-111 405.2 361 68.1
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 8.7e-111 404.4 359 65.2
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 3.3e-110 402.5 364 66.8
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 4.8e-109 398.7 358 67.0
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 8.2e-109 397.9 359 68.8
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 1.4e-108 397.1 360 65.0
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 9.0e-108 394.4 358 67.6
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 4.5e-107 392.1 357 63.0
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.0e-106 391.0 364 66.2
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 1.3e-106 390.6 354 63.6
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 1.7e-106 390.2 366 60.9
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 3.8e-106 389.0 366 62.8
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 3.8e-106 389.0 366 62.8
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 3.8e-106 389.0 365 66.3
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 8.4e-106 387.9 365 64.7
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 1.4e-105 387.1 365 66.3
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 1.9e-105 386.7 363 60.6
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 1.9e-105 386.7 369 60.4
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 4.2e-105 385.6 360 66.9
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 2.1e-104 383.3 363 60.9
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 2.1e-104 383.3 363 60.9
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 2.7e-104 382.9 363 63.1
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 4.6e-104 382.1 360 66.7
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 4.6e-104 382.1 363 63.9
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 1.3e-103 380.6 361 63.7
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 1.8e-103 380.2 366 62.6
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 2.3e-103 379.8 368 58.7
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 8.7e-103 377.9 355 65.6
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 8.7e-103 377.9 369 57.5
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 1.5e-102 377.1 369 63.1
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.5e-102 377.1 352 65.1
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 1.9e-102 376.7 355 65.4
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 1.9e-102 376.7 370 59.7
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.9e-102 376.7 354 64.7
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 3.3e-102 375.9 414 58.9
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 5.7e-102 375.2 359 64.9
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 5.7e-102 375.2 361 61.5
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 7.4e-102 374.8 368 59.8
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 7.4e-102 374.8 357 61.3
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 9.7e-102 374.4 364 60.2
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.3e-101 374.0 372 58.9
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 1.3e-101 374.0 363 64.7
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 8.2e-101 371.3 344 65.1
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 1.4e-100 370.5 368 59.0
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 3.1e-100 369.4 360 62.5
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 6.9e-100 368.2 365 58.9
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 1.2e-99 367.5 364 62.9
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 1.2e-99 367.5 366 62.6
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.5e-99 367.1 372 57.3
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.5e-99 367.1 372 57.3
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.5e-99 367.1 372 57.3
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 2.0e-99 366.7 366 61.7
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 1.0e-98 364.4 286 72.0
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 3.8e-98 362.5 372 56.7
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 5.0e-98 362.1 358 59.8
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 2.5e-97 359.8 334 63.5
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 3.2e-97 359.4 365 60.0
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 6.1e-96 355.1 367 57.2
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 2.3e-95 353.2 380 60.5
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 2.3e-95 353.2 354 61.9
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 2.3e-95 353.2 297 68.4
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 5.1e-95 352.1 196 88.8
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 6.7e-95 351.7 366 62.0
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 2.5e-94 349.7 247 74.5
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 3.3e-94 349.4 360 63.1
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 7.4e-94 348.2 360 61.1
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.3e-93 347.4 360 62.2
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 1.7e-93 347.1 360 61.9
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 3.7e-93 345.9 369 58.8
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.1e-92 344.4 352 56.0
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 4.1e-92 342.4 362 57.7
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 5.9e-91 338.6 351 55.6
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 1.0e-90 337.8 367 56.4
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 3.8e-90 335.9 353 60.1
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 1.1e-89 334.3 287 63.1
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 1.4e-89 334.0 190 85.8
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 5.5e-89 332.0 441 51.5
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 1.2e-88 330.9 352 56.5
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 8.8e-87 324.7 359 55.4
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 2.0e-86 323.6 362 55.8
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 4.8e-85 318.9 366 56.3
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.3e-82 310.8 352 53.7
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 6.1e-80 302.0 336 58.9
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 1.7e-74 283.9 251 63.3
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 5.0e-74 282.3 288 61.8
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 1.5e-73 280.8 401 50.6
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 2.0e-70 270.4 338 52.7
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 3.3e-70 269.6 194 70.6
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 1.6e-67 260.8 297 57.6
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 1.1e-65 254.6 290 55.5
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 1.5e-65 254.2 290 56.2
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 3.7e-61 239.6 199 61.3
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 3.1e-60 236.5 278 53.6
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 8.0e-56 221.9 300 53.0
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 6.8e-55 218.8 250 47.2
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 4.9e-53 212.6 252 48.4
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.6e-51 207.6 175 56.6
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 5.6e-49 199.1 254 44.9
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 1.5e-46 191.0 193 49.7
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 2.8e-24 117.1 74 78.4
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 8.1e-24 115.5 80 63.8
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 7.6e-22 109.0 133 45.1
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 3.2e-20 103.6 140 39.3
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 1.5e-17 94.7 61 80.3
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 5.6e-17 92.8 190 33.7
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 7.3e-17 92.4 195 32.8
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 1.8e-15 87.8 52 88.5
Solyc05g013480.4 Solanum lycopersicum HOM05D006540 ORTHO05D008202 6.4e-13 79.3 203 44.8
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 6.0e-11 72.8 44 70.5
Pp3c6_29630 Physcomitrium patens HOM05D006540 ORTHO05D008202 3.4e-06 57.0 66 40.9


User provided reference genes

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