Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 2.4e-189 665.2 314 100.0
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 3.3e-162 575.1 314 88.5
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.0e-78 296.2 329 49.5
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.9e-77 293.5 317 50.8
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.6e-77 292.0 328 48.8
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 8.1e-76 288.1 314 50.0
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.2e-74 284.3 331 47.1
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 5.1e-62 242.3 320 45.9
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 6.6e-62 241.9 337 44.8
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 1.5e-61 240.7 320 45.9
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 1.3e-60 237.7 312 45.5
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 4.8e-60 235.7 316 43.4
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 1.1e-59 234.6 316 43.0
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 2.4e-59 233.4 329 41.9
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 9.0e-59 231.5 335 44.2
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.0e-58 230.3 316 42.1
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 1.3e-57 227.6 319 43.3
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.7e-57 227.3 316 41.5
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.9e-57 226.5 316 41.8
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 3.8e-57 226.1 317 42.0
SGA_v2.0_scaffold207G41950 Striga asiatica HOM05D007794 ORTHO05D009810 8.4e-57 224.9 321 42.4
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 9.3e-56 221.5 207 53.1
Solyc01g106530.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.2e-55 221.1 315 41.9
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 1.6e-55 220.7 318 43.4
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 4.6e-55 219.2 317 43.2
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 7.9e-55 218.4 309 44.7
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 6.6e-54 215.3 323 42.4
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 1.6e-52 210.7 249 48.6
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 2.1e-52 210.3 326 40.2
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 2.8e-52 209.9 317 42.0
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 4.8e-52 209.1 325 40.6
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 1.1e-51 208.0 322 41.0
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 4.0e-51 206.1 313 39.9
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 2.0e-50 203.8 233 45.5
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 1.3e-49 201.1 341 39.3
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 4.6e-47 192.6 318 39.6
Migut.N01107 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.7e-46 188.7 172 55.2
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 1.1e-43 181.4 323 37.2
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.2e-42 177.9 164 54.9
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 2.2e-41 173.7 242 41.3
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 9.3e-40 168.3 309 36.2
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 6.0e-39 165.6 312 36.5
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 2.3e-38 163.7 312 37.5
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 3.9e-38 162.9 184 50.0
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 1.1e-37 161.4 311 35.7
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 4.3e-37 159.5 312 35.6
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 5.7e-37 159.1 313 34.2
Oeu059894.2 Olea europaea HOM05D007794 ORTHO05D009810 9.6e-37 158.3 88 85.2
COL.COLO4_32419 Corchorus olitorius HOM05D007794 ORTHO05D009810 2.8e-36 156.8 269 38.3
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 6.3e-36 155.6 313 33.5
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 6.9e-35 152.1 314 35.0
SGA_v2.0_scaffold207G41947 Striga asiatica HOM05D007794 ORTHO05D009810 6.9e-35 152.1 188 47.9
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 9.0e-35 151.8 312 34.9
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 1.5e-34 151.0 240 38.8
SGA_v2.0_scaffold207G41942 Striga asiatica HOM05D007794 ORTHO05D009810 4.5e-34 149.4 176 51.7
SGA_v2.0_scaffold98G29290 Striga asiatica HOM05D007794 ORTHO05D009810 6.5e-33 145.6 180 48.3
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 1.4e-32 144.4 316 33.9
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 4.6e-31 139.4 309 32.7
Migut.C00193 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.7e-30 135.6 219 38.8
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.7e-30 135.2 214 37.4
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.7e-30 135.2 172 41.9
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 1.1e-29 134.8 336 34.8
Nn3g19115 Nelumbo nucifera HOM05D007794 ORTHO05D009810 4.3e-29 132.9 204 42.6
Migut.C00190 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.1e-27 126.7 137 50.4
SGA_v2.0_scaffold98G29291 Striga asiatica HOM05D007794 ORTHO05D009810 1.5e-26 124.4 172 43.0
Ciclev10030054m.g Citrus clementina HOM05D007794 ORTHO05D009810 2.0e-26 124.0 144 44.4
Migut.C00194 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.3e-25 121.3 229 36.2
Rhsim02G0140200 Rhododendron simsii HOM05D007794 ORTHO05D009810 5.0e-25 119.4 109 57.8
Migut.C00192 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.1e-24 118.2 209 37.8
Sopen01g048880 Solanum pennellii HOM05D007794 ORTHO05D009810 2.5e-24 117.1 114 52.6
Cfa004824 Carpinus fangiana HOM05D007794 ORTHO05D009810 4.6e-23 112.8 168 43.5
Migut.C00191 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.0e-22 110.2 173 39.3
Migut.C00208 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.0e-17 92.8 107 46.7
Nn3g21338 Nelumbo nucifera HOM05D007794 ORTHO05D009810 9.4e-16 88.6 196 34.7
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.2e-15 88.2 257 28.4
CAN.G504.74 Capsicum annuum HOM05D007794 ORTHO05D009810 4.7e-15 86.3 124 39.5
Migut.O00773 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.0e-14 83.6 100 45.0
TPR.G32148 Trifolium pratense HOM05D001479 ORTHO05D009810 6.7e-14 82.4 134 40.3
Rhsim05G0099100 Rhododendron simsii HOM05D007794 ORTHO05D009810 5.7e-13 79.3 63 61.9
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.8e-12 77.0 118 36.4
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.7e-12 76.6 238 27.7
CAN.G504.34 Capsicum annuum HOM05D007794 ORTHO05D009810 8.2e-12 75.5 314 25.2
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 8.2e-12 75.5 239 28.0
Rhsim05G0099500 Rhododendron simsii HOM05D007794 ORTHO05D009810 5.3e-11 72.8 59 64.4
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 2.0e-10 70.9 159 28.9
Aqoxy2G00614 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.5e-10 70.1 211 27.5
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.5e-10 70.1 240 26.7
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.5e-10 70.1 191 29.3
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 5.9e-10 69.3 127 35.4
Peaxi162Scf00152g00088 Petunia axillaris HOM05D007794 ORTHO05D009810 2.2e-09 67.4 55 49.1
Aqoxy3G03018 Aquilegia oxysepala HOM05D007794 ORTHO05D009810 2.9e-09 67.0 81 43.2
PGSC0003DMG400006057 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.5e-09 65.9 134 30.6
Aqoxy5G01075 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-08 65.1 132 36.4
Nn6g31857 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.5e-08 64.7 191 29.8
PGSC0003DMG400006038 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.5e-08 64.7 134 31.3
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 2.5e-08 63.9 197 29.4
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.2e-08 63.2 120 30.8
Solyc11g005160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.2e-08 63.2 131 28.2
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.5e-08 62.8 122 32.8
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 7.2e-08 62.4 212 29.2
Sopen11g001160 Solanum pennellii HOM05D000151 ORTHO05D000074 9.4e-08 62.0 104 34.6
PGSC0003DMG400006029 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.4e-08 62.0 103 35.0
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.2e-07 61.6 135 32.6
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 1.2e-07 61.6 192 27.6
Peaxi162Scf00300g00043 Petunia axillaris HOM05D000151 ORTHO05D000074 1.2e-07 61.6 129 32.6
PGSC0003DMG400006040 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.2e-07 61.6 138 27.5
PSO210G7519 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-07 61.2 107 36.4
Rhsim05G0111900 Rhododendron simsii HOM05D008700 ORTHO05D010645 1.6e-07 61.2 52 63.5
PGSC0003DMG400006039 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.6e-07 61.2 132 29.5
Hma1.2p1_0032F.1_g018990 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 2.1e-07 60.8 187 31.0
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-07 60.5 164 29.3
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-07 60.5 164 29.3
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-07 60.5 176 28.4
CANSAT25G3017 Cannabis sativa HOM05D000151 ORTHO05D000074 3.6e-07 60.1 126 31.7
MBI16_g20802_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.6e-07 60.1 274 24.8
PGSC0003DMG400006059 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.6e-07 60.1 134 29.9
Ciclev10029800m.g Citrus clementina HOM05D007794 ORTHO05D009810 4.7e-07 59.7 227 28.2
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 6.1e-07 59.3 144 29.9
CAN.G890.11 Capsicum annuum HOM05D000151 ORTHO05D000074 8.0e-07 58.9 121 33.1
Nitab4.5_0003585g0020 Nicotiana tabacum HOM05D001876 ORTHO05D000074 8.0e-07 58.9 131 29.8
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 8.0e-07 58.9 208 26.4
TWI34G1020 Tripterygium wilfordii HOM05D008995 ORTHO05D000074 1.4e-06 58.2 193 26.9
TAR628G0991 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-06 58.2 185 29.2
vmacro02302 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 1.4e-06 58.2 189 29.6
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 1.8e-06 57.8 126 32.5
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 2.3e-06 57.4 134 32.1
PGSC0003DMG400006060 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.3e-06 57.4 86 36.0
TAR374G1264 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.3e-06 57.4 201 28.9
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 4.0e-06 56.6 133 30.1
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.0e-06 56.6 73 38.4
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.0e-06 56.6 73 38.4
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.0e-06 56.6 73 38.4
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 5.2e-06 56.2 140 31.4
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.2e-06 56.2 73 38.4
PGSC0003DMG400001546 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.2e-06 56.2 121 31.4
TAR627G0263 Trochodendron aralioides HOM05D001286 ORTHO05D000440 5.2e-06 56.2 142 28.9
Aqoxy7G02804 Aquilegia oxysepala HOM05D008995 ORTHO05D000074 6.7e-06 55.8 80 42.5
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 6.7e-06 55.8 292 23.3
MBI17_g17513_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 6.7e-06 55.8 138 30.4
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 6.7e-06 55.8 126 31.7
arahy.Tifrunner.gnm1.ann1.PYC0TU Arachis hypogaea HOM05D000151 ORTHO05D000074 8.8e-06 55.5 171 31.6


User provided reference genes

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