Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 2.8e-55 218.4 112 100.0
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 9.7e-40 166.8 111 77.5
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 9.1e-22 107.1 102 54.9
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 5.5e-19 97.8 103 54.4
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 5.7e-16 87.8 103 56.3
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 7.5e-16 87.4 121 43.0
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.2e-15 85.9 110 51.8
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 7.0e-14 80.9 111 43.2
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 1.2e-13 80.1 104 44.2
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 2.0e-13 79.3 131 40.5
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 3.5e-13 78.6 119 44.5
Migut.F00890 Erythranthe guttata HOM05D009634 ORTHO05D009650 3.5e-13 78.6 104 45.2
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 4.5e-13 78.2 100 42.0
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 5.9e-13 77.8 95 45.3
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 5.9e-13 77.8 112 46.4
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.0e-12 77.0 117 44.4
SGA_v2.0_scaffold13G06494 Striga asiatica HOM05D009634 ORTHO05D009650 2.2e-12 75.9 103 43.7
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 3.8e-12 75.1 100 39.0
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 1.1e-11 73.6 82 47.6
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 2.5e-11 72.4 114 42.1
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 9.4e-11 70.5 106 43.4
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 9.4e-11 70.5 101 44.6
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 1.2e-10 70.1 104 39.4
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 1.6e-10 69.7 123 39.8
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 2.1e-10 69.3 110 42.7
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 6.1e-10 67.8 114 43.0
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 8.0e-10 67.4 109 40.4
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 1.0e-09 67.0 85 45.9
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 1.0e-09 67.0 117 39.3
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 2.3e-09 65.9 109 41.3
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 5.2e-09 64.7 111 38.7
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 8.8e-09 63.9 111 37.8
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 8.8e-09 63.9 108 40.7
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 1.2e-08 63.5 109 40.4
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 3.4e-08 62.0 94 40.4
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 5.7e-08 61.2 98 41.8
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 5.7e-08 61.2 94 42.6
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 5.7e-08 61.2 108 39.8
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 5.7e-08 61.2 93 39.8
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 7.5e-08 60.8 106 38.7
Migut.F00892 Erythranthe guttata HOM05D009634 ORTHO05D009650 7.5e-08 60.8 103 38.8
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 7.5e-08 60.8 94 44.7
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 7.5e-08 60.8 94 41.5
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 7.5e-08 60.8 94 44.7
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 7.5e-08 60.8 117 35.0
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.3e-07 60.1 112 38.4
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 3.7e-07 58.5 102 40.2
TWI38G0562 Tripterygium wilfordii HOM05D008140 ORTHO05D009650 4.8e-07 58.2 118 36.4
CiPaw.13G036700 Carya illinoinensis HOM05D008140 ORTHO05D009650 6.3e-07 57.8 108 37.0
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 1.4e-06 56.6 109 35.8
TAR636G0417 Trochodendron aralioides HOM05D008140 ORTHO05D009650 3.1e-06 55.5 130 36.2


User provided reference genes

Program Settings