Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 1.2e-58 229.6 115 100.0
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 9.9e-48 193.4 113 85.8
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 1.8e-28 129.4 129 57.4
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 3.7e-26 121.7 103 60.2
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 3.8e-23 111.7 112 57.1
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 5.0e-23 111.3 118 55.9
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.5e-21 105.1 113 49.6
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 4.6e-21 104.8 99 59.6
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 1.8e-20 102.8 100 56.0
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 2.3e-20 102.4 121 51.2
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 1.1e-19 100.1 114 50.9
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 1.1e-19 100.1 114 47.4
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 2.5e-19 99.0 90 55.6
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.5e-19 99.0 98 50.0
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 9.7e-19 97.1 114 46.5
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 9.7e-19 97.1 97 53.6
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 2.2e-18 95.9 119 47.9
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 2.2e-18 95.9 119 47.9
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.2e-18 95.9 98 54.1
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 2.8e-18 95.5 113 49.6
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.8e-18 95.5 115 47.0
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 3.7e-18 95.1 120 48.3
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 4.8e-18 94.7 122 45.1
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 6.3e-18 94.4 113 46.0
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 8.2e-18 94.0 120 53.3
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 1.1e-17 93.6 117 46.2
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 2.4e-17 92.4 120 45.0
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 2.4e-17 92.4 100 49.0
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 2.4e-17 92.4 98 52.0
Migut.F01597 Erythranthe guttata HOM05D005304 ORTHO05D004438 5.3e-17 91.3 123 47.2
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 6.9e-17 90.9 126 43.7
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 9.0e-17 90.5 121 47.9
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 1.2e-16 90.1 115 47.8
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 1.5e-16 89.7 110 47.3
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 2.6e-16 89.0 125 44.8
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 2.6e-16 89.0 121 44.6
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 2.6e-16 89.0 53 73.6
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 4.5e-16 88.2 124 45.2
SalBow6G1975 Salvia bowleyana HOM05D005304 ORTHO05D004438 7.7e-16 87.4 112 50.0
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.0e-15 87.0 109 44.0
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 1.3e-15 86.7 119 44.5
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 1.3e-15 86.7 114 48.2
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 1.7e-15 86.3 113 40.7
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 2.2e-15 85.9 126 42.9
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 2.2e-15 85.9 119 44.5
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.0e-15 84.7 114 44.7
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.0e-15 84.7 114 44.7
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 5.0e-15 84.7 114 44.7
Sopen05g033870 Solanum pennellii HOM05D005304 ORTHO05D004438 6.5e-15 84.3 112 49.1
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 6.5e-15 84.3 105 53.3
Hma1.2p1_0454F.1_g156290 Hydrangea macrophylla HOM05D005304 ORTHO05D004438 1.1e-14 83.6 122 44.3
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 1.9e-14 82.8 77 57.1
MSTRG.9124 Avicennia marina HOM05D005304 ORTHO05D004438 4.2e-14 81.6 107 45.8
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 4.2e-14 81.6 124 43.5
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 5.5e-14 81.3 99 48.5
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 5.5e-14 81.3 112 47.3
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 2.1e-13 79.3 83 49.4
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.7e-13 79.0 104 44.2
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 4.6e-13 78.2 102 51.0
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 6.1e-13 77.8 105 46.7
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 7.9e-13 77.4 99 45.5
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 7.9e-13 77.4 115 42.6
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.0e-12 77.0 113 42.5
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.0e-12 77.0 122 44.3
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 1.4e-12 76.6 100 45.0
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.4e-12 76.6 100 45.0
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.4e-12 76.6 100 45.0
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.4e-12 76.6 115 42.6
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.8e-12 76.3 113 42.5
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 2.3e-12 75.9 109 40.4
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 3.0e-12 75.5 105 44.8
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 3.0e-12 75.5 106 39.6
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 5.1e-12 74.7 117 41.9
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 5.1e-12 74.7 103 50.5
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 5.1e-12 74.7 105 49.5
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 6.7e-12 74.3 73 54.8
CAN.G135.30 Capsicum annuum HOM05D021137 ORTHO05D004438 8.8e-12 73.9 113 41.6
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 8.8e-12 73.9 118 37.3
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.1e-11 73.6 99 44.4
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.1e-11 73.6 104 43.3
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 1.1e-11 73.6 116 41.4
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 1.5e-11 73.2 116 42.2
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 1.5e-11 73.2 76 52.6
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 2.0e-11 72.8 73 53.4
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.0e-11 72.8 104 42.3
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.5e-11 72.4 116 44.8
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.5e-11 72.4 116 44.8
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 7.4e-11 70.9 133 38.3
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 9.7e-11 70.5 116 44.0
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.7e-10 69.7 75 52.0
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.7e-10 69.7 75 52.0
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 1.7e-10 69.7 74 48.6
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 2.8e-10 68.9 75 46.7
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 4.8e-10 68.2 73 50.7
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.3e-10 67.8 56 62.5
Sabra08G0019700 Salix brachista HOM05D005304 ORTHO05D004438 6.3e-10 67.8 91 46.2
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 6.3e-10 67.8 70 51.4
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 8.2e-10 67.4 68 50.0
DCAR_019059 Daucus carota HOM05D005304 ORTHO05D004438 1.4e-09 66.6 104 45.2
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 1.8e-09 66.2 118 33.9
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 3.1e-09 65.5 110 37.3
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 3.1e-09 65.5 117 34.2
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 6.9e-09 64.3 119 37.0
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 6.9e-09 64.3 82 45.1
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 6.9e-09 64.3 127 33.9
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 9.1e-09 63.9 119 33.6
Psat6g173960 Pisum sativum HOM05D005304 ORTHO05D004438 9.1e-09 63.9 130 33.8
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.2e-08 63.5 63 50.8
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 2.0e-08 62.8 58 51.7
Lalb_Chr06g0170051 Lupinus albus HOM05D005304 ORTHO05D004438 2.6e-08 62.4 75 42.7
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 3.4e-08 62.0 108 41.7
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 1.3e-07 60.1 57 50.9
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 1.3e-07 60.1 112 37.5
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.3e-07 60.1 99 39.4
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 1.3e-07 60.1 120 30.8
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 1.7e-07 59.7 54 53.7
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.7e-07 59.7 82 45.1
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.7e-07 59.7 54 55.6
Sed0006013 Sechium edule HOM05D005304 ORTHO05D004438 1.7e-07 59.7 109 34.9
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.2e-07 59.3 54 55.6
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 2.9e-07 58.9 107 36.4
Eucgr.J00398 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.9e-07 58.9 89 39.3
Solyc11g007880.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 2.9e-07 58.9 77 45.5
Sopen11g003740 Solanum pennellii HOM05D021137 ORTHO05D004438 2.9e-07 58.9 77 45.5
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 3.8e-07 58.5 54 44.4
Actinidia06715 Actinidia chinensis HOM05D005304 ORTHO05D004438 5.0e-07 58.2 98 43.9
Lalb_Chr03g0036331 Lupinus albus HOM05D005304 ORTHO05D004438 5.0e-07 58.2 102 39.2
Medtr1g090837 Medicago truncatula HOM05D005304 ORTHO05D004438 6.5e-07 57.8 57 49.1
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 8.5e-07 57.4 79 41.8
Eucgr.J01032 Eucalyptus grandis HOM05D005304 ORTHO05D004438 1.4e-06 56.6 80 43.8
Sc20g0001450 Simmondsia chinensis HOM05D005304 ORTHO05D004438 1.4e-06 56.6 104 35.6
ClCG02G023190 Citrullus lanatus HOM05D003595 ORTHO05D004132 3.2e-06 55.5 65 46.2
Sopen11g003730 Solanum pennellii HOM05D021137 ORTHO05D004438 3.2e-06 55.5 66 50.0
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 5.5e-06 54.7 78 44.9
BcaNung04931 Brassica carinata HOM05D008699 ORTHO05D012283 7.2e-06 54.3 124 36.3
CsaV3_4G024290 Cucumis sativus L. HOM05D003595 ORTHO05D004132 7.2e-06 54.3 59 45.8
C05p57520 Brassica napus HOM05D008699 ORTHO05D012283 9.4e-06 53.9 122 34.4
BolC5t34409H Brassica oleracea HOM05D008699 ORTHO05D012283 9.4e-06 53.9 122 34.4
MELO3C014591.2 Cucumis melo HOM05D003595 ORTHO05D004132 9.4e-06 53.9 59 45.8
SEGI_05316 Sequoiadendron giganteum HOM05D018057 ORTHO05D004438 9.4e-06 53.9 65 46.2


User provided reference genes

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