Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 9.5e-199 698.0 883 100.0
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 7.5e-95 352.8 880 75.5
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 1.6e-89 335.1 886 75.3
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 4.7e-89 333.6 882 73.2
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 6.8e-88 329.7 876 71.0
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 6.6e-75 286.6 886 69.4
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 1.1e-74 285.8 875 72.2
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 7.3e-74 283.1 886 73.0
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 4.7e-73 280.4 887 61.1
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 1.5e-71 275.4 877 72.6
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 2.1e-68 265.0 882 70.3
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 3.3e-66 257.7 886 70.0
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 2.1e-65 255.0 880 65.0
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 2.8e-65 254.6 887 67.1
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 3.6e-65 254.2 874 71.6
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 6.2e-65 253.4 875 72.0
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 6.9e-64 250.0 884 68.6
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 9.9e-63 246.1 190 63.7
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 3.8e-62 244.2 878 71.6
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 2.4e-61 241.5 193 61.1
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 3.5e-60 237.7 882 70.7
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 4.6e-60 237.3 882 69.5
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 7.8e-60 236.5 199 59.3
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 1.0e-59 236.1 191 61.8
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 6.6e-59 233.4 903 66.8
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 8.7e-59 233.0 843 74.4
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 1.9e-58 231.9 196 56.6
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 5.6e-58 230.3 196 56.6
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 7.3e-58 229.9 193 58.5
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 9.6e-58 229.6 195 56.4
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 1.3e-57 229.2 889 66.4
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 4.8e-57 227.3 178 63.5
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 1.4e-56 225.7 178 62.9
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 1.8e-56 225.3 192 57.8
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 1.8e-56 225.3 875 69.7
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 2.4e-56 224.9 881 67.1
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 2.4e-56 224.9 843 73.9
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 4.0e-56 224.2 881 66.7
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 5.3e-56 223.8 191 58.6
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 9.0e-56 223.0 178 62.4
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 1.5e-55 222.2 191 56.0
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 2.0e-55 221.9 197 55.3
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 7.6e-55 219.9 880 69.3
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 1.7e-54 218.8 877 66.9
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 1.9e-53 215.3 875 69.6
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 4.2e-53 214.2 193 52.3
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 9.3e-53 213.0 193 52.3
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 1.6e-52 212.2 193 52.3
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 2.7e-52 211.5 197 51.3
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 3.5e-52 211.1 875 69.4
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 4.6e-52 210.7 875 69.5
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 7.9e-52 209.9 196 51.5
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 3.0e-51 208.0 879 60.3
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 3.0e-51 208.0 195 51.8
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 3.9e-51 207.6 197 52.8
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 6.7e-51 206.8 882 69.8
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 1.1e-50 206.1 197 49.7
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 1.9e-50 205.3 883 62.9
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 3.3e-50 204.5 197 50.8
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 4.3e-50 204.1 188 52.7
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 5.6e-50 203.8 193 50.3
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 1.3e-49 202.6 255 43.9
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 1.3e-49 202.6 193 50.8
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 2.8e-49 201.4 197 50.8
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 3.6e-49 201.1 193 50.3
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 3.6e-49 201.1 193 50.3
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 3.6e-49 201.1 193 50.3
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 3.6e-49 201.1 197 48.7
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 3.6e-49 201.1 197 49.7
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 1.8e-48 198.7 199 52.8
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 6.9e-48 196.8 189 51.3
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 6.9e-48 196.8 189 51.3
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 4.5e-47 194.1 867 64.0
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 2.9e-46 191.4 881 67.2
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 3.8e-46 191.0 865 66.7
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 6.4e-46 190.3 188 50.0
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 1.1e-45 189.5 869 70.3
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 4.6e-44 184.1 197 45.2
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 1.1e-42 179.5 192 51.0
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 2.5e-42 178.3 174 50.6
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 5.6e-42 177.2 187 49.2
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 7.4e-42 176.8 193 46.6
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 1.5e-39 169.1 178 48.3
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.2e-36 159.5 189 48.7
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 2.7e-36 158.3 181 45.3
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 1.0e-35 156.4 187 47.6
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 5.1e-35 154.1 221 44.8
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 1.9e-34 152.1 197 39.1
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 9.0e-32 143.3 201 39.3
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 1.2e-31 142.9 199 39.7
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 2.6e-31 141.7 172 44.2
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 1.4e-29 136.0 152 50.0
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 1.2e-28 132.9 158 46.8
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 3.6e-28 131.3 192 38.0
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 3.9e-27 127.9 154 46.8
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 5.1e-27 127.5 200 37.5
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 1.9e-26 125.6 158 41.1
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 2.8e-25 121.7 176 37.5
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 5.3e-24 117.5 197 37.1
MD05G1134700 Malus domestica HOM05D007101 ORTHO05D008632 1.9e-21 109.0 107 51.4
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 5.1e-19 100.9 201 31.8
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 1.1e-18 99.8 144 39.6
VMungo0251G1721 Vigna mungo HOM05D007101 ORTHO05D008632 3.7e-17 94.7 102 47.1
ATR0618G240 Amborella trichopoda HOM05D007101 ORTHO05D008632 2.1e-12 79.0 206 27.7
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 2.6e-10 72.0 121 38.0
SalBow2G2822 Salvia bowleyana HOM05D006819 ORTHO05D008763 6.3e-09 67.4 150 27.3
SalBow2G3436 Salvia bowleyana HOM05D006819 ORTHO05D008763 1.4e-08 66.2 150 27.3
Duzib235G1541 Durio zibethinus HOM05D006819 ORTHO05D008763 4.1e-08 64.7 150 25.3
Lj3g0013909 Lotus japonicus HOM05D006819 ORTHO05D008763 1.2e-07 63.2 139 27.3
COL.COLO4_12924 Corchorus olitorius HOM05D006819 ORTHO05D008763 2.6e-07 62.0 132 26.5
Ciclev10024942m.g Citrus clementina HOM05D006819 ORTHO05D008763 7.7e-07 60.5 139 25.9
THA.LOC104815536 Tarenaya hassleriana HOM05D006819 ORTHO05D008763 7.7e-07 60.5 146 25.3
Gohir.D13G154100 Gossypium hirsutum HOM05D002453 ORTHO05D008746 1.0e-06 60.1 183 28.4
Gorai.013G174100 Gossypium raimondii HOM05D002453 ORTHO05D008746 1.0e-06 60.1 183 28.4
Sabra11G0096300 Salix brachista HOM05D000891 ORTHO05D008746 1.3e-06 59.7 183 31.1
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 1.7e-06 59.3 144 24.3
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 1.7e-06 59.3 89 38.2
Nn6g34498 Nelumbo nucifera HOM05D002453 ORTHO05D008746 2.2e-06 58.9 182 30.8
Potri.011G108500 Populus trichocarpa HOM05D002453 ORTHO05D008746 2.2e-06 58.9 183 31.7
SMO361G0319 Selaginella moellendorffii HOM05D005362 ORTHO05D010796 2.2e-06 58.9 133 27.1
BraA04t16905Z Brassica rapa HOM05D006858 ORTHO05D008767 2.9e-06 58.5 99 31.3
Dinv30584 Davidia involucrata HOM05D006819 ORTHO05D008763 2.9e-06 58.5 149 25.5
Thecc.06G069300 Theobroma cacao HOM05D006819 ORTHO05D008763 2.9e-06 58.5 107 28.0
A04p12420 Brassica napus HOM05D006858 ORTHO05D008767 6.5e-06 57.4 99 30.3
Ciclev10020178m.g Citrus clementina HOM05D002453 ORTHO05D008746 6.5e-06 57.4 179 27.9
Thhalv10027654m.g Eutrema salsugineum HOM05D006858 ORTHO05D008767 6.5e-06 57.4 100 33.0
Glyma.07G160400 Glycine max HOM05D007409 ORTHO05D009264 8.5e-06 57.0 127 27.6


User provided reference genes

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