Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059793.1 Olea europaea HOM05D006413 ORTHO05D007722 4.5e-253 877.5 451 100.0
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 5.0e-119 432.2 452 56.0
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 2.6e-115 419.9 451 54.8
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 2.0e-107 393.7 412 54.6
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 2.6e-107 393.3 457 52.5
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 5.3e-105 385.6 448 51.3
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 1.1e-102 377.9 382 54.7
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 1.4e-100 370.9 373 56.6
CiPaw.02G050700 Carya illinoinensis HOM05D006413 ORTHO05D007722 5.2e-100 369.0 367 56.1
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 2.6e-99 366.7 371 56.1
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 2.6e-99 366.7 385 52.7
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 4.4e-99 365.9 372 53.8
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 5.7e-99 365.5 371 57.4
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 1.7e-98 364.0 432 51.9
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 1.4e-97 360.9 371 56.3
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 5.3e-97 359.0 442 50.9
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 5.3e-97 359.0 371 56.1
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 7.0e-97 358.6 371 56.6
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 1.2e-96 357.8 375 53.1
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 1.6e-96 357.5 372 53.5
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 3.8e-95 352.8 371 55.3
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 8.5e-95 351.7 474 45.8
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 1.1e-94 351.3 371 55.8
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 1.2e-93 347.8 370 54.1
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 2.1e-93 347.1 371 51.2
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 2.7e-93 346.7 393 49.9
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 6.1e-93 345.5 421 49.2
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 6.1e-93 345.5 426 49.1
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 6.1e-93 345.5 371 53.4
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 8.0e-93 345.1 374 52.1
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 8.0e-93 345.1 460 45.7
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 1.4e-92 344.4 386 52.8
FAN14G2652 Fragaria x ananassa HOM05D006413 ORTHO05D007722 2.3e-92 343.6 426 48.6
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 3.0e-92 343.2 397 51.4
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 1.2e-91 341.3 374 51.6
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 5.7e-91 339.0 378 51.9
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 7.5e-91 338.6 439 47.6
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 2.8e-90 336.7 390 48.5
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 2.8e-90 336.7 377 51.5
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 4.8e-90 335.9 374 53.5
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 6.3e-90 335.5 388 49.0
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 1.4e-89 334.3 367 51.0
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 9.1e-89 331.6 387 48.1
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 1.5e-86 324.3 366 48.6
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 5.5e-86 322.4 368 50.0
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 5.5e-86 322.4 368 48.9
CANSAT01G2278 Cannabis sativa HOM05D006413 ORTHO05D007722 1.2e-85 321.2 366 51.6
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 1.6e-85 320.9 390 50.0
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 2.8e-85 320.1 370 49.2
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 4.7e-85 319.3 366 49.2
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 1.4e-84 317.8 385 49.6
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 3.0e-84 316.6 371 48.5
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 5.2e-84 315.8 384 50.5
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 1.2e-83 314.7 429 45.9
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 1.2e-83 314.7 373 49.6
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 3.4e-83 313.2 378 48.4
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 5.7e-83 312.4 375 49.3
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 1.3e-82 311.2 426 46.2
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 2.2e-82 310.5 442 46.8
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 4.9e-82 309.3 369 48.0
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 1.6e-80 304.3 378 48.4
PSO782G4045 Papaver somniferum HOM05D006413 ORTHO05D007722 5.9e-80 302.4 326 49.7
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 7.8e-80 302.0 363 46.3
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 1.3e-79 301.2 374 50.0
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 2.5e-78 297.0 371 46.6
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 4.3e-78 296.2 375 46.4
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 7.3e-78 295.4 372 47.8
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 2.1e-77 293.9 372 48.4
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 3.6e-77 293.1 406 45.1
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 3.6e-77 293.1 371 46.4
Psat2g176480 Pisum sativum HOM05D006413 ORTHO05D007722 4.7e-77 292.7 335 47.8
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 6.1e-77 292.4 402 44.3
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 4.0e-76 289.7 371 46.4
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 1.2e-75 288.1 371 46.6
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 1.5e-75 287.7 396 44.4
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 1.5e-75 287.7 369 45.8
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 7.5e-75 285.4 380 46.1
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 8.3e-74 282.0 473 41.6
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 1.4e-73 281.2 367 46.6
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 1.0e-71 275.0 375 41.9
Ca_30995_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 1.3e-71 274.6 308 49.4
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 5.6e-70 269.2 388 42.3
vmacro12628 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 5.6e-70 269.2 590 36.1
Glyma.19G019600 Glycine max HOM05D006413 ORTHO05D007722 1.2e-69 268.1 320 48.4
Sed0002155 Sechium edule HOM05D006413 ORTHO05D007722 2.1e-69 267.3 309 47.9
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 8.9e-68 261.9 461 41.2
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 2.0e-67 260.8 380 41.3
Lj9A544G35 Lonicera japonica HOM05D006413 ORTHO05D007722 1.3e-66 258.1 259 55.2
PSO063G3388 Papaver somniferum HOM05D006413 ORTHO05D007722 2.2e-66 257.3 275 49.1
ATR0579G084 Amborella trichopoda HOM05D006413 ORTHO05D007722 4.9e-66 256.1 332 45.5
MD05G1207200 Malus domestica HOM05D006413 ORTHO05D007722 6.6e-55 219.2 331 45.0
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 3.8e-50 203.4 398 37.9
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 1.2e-48 198.4 411 33.8
CSS0011223 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 4.3e-46 189.9 160 60.6
CDE12G0027 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 4.2e-41 173.3 237 46.0
Nitab4.5_0000001g0010 Nicotiana tabacum HOM05D006413 ORTHO05D007722 1.6e-40 171.4 451 33.0
Hund26913 Selenicereus undatus HOM05D006413 ORTHO05D007722 1.8e-36 157.9 174 48.9
SMO358G0223 Selaginella moellendorffii HOM05D006413 ORTHO05D007722 9.9e-35 152.1 203 43.3
Hund26914 Selenicereus undatus HOM05D006413 ORTHO05D007722 2.4e-33 147.5 225 45.8
Glyma.15G001000 Glycine max HOM05D006413 ORTHO05D007722 9.3e-33 145.6 97 76.3
CSS0026125 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 8.4e-26 122.5 168 44.6
CSS0033391 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.4e-25 121.7 168 44.6
Ciclev10020349m.g Citrus clementina HOM05D006413 ORTHO05D007722 5.5e-25 119.8 115 54.8
Psat3g197040 Pisum sativum HOM05D006413 ORTHO05D007722 7.9e-24 115.9 137 43.1
Hma1.2p1_0074F.1_g038990 Hydrangea macrophylla HOM05D006413 ORTHO05D007722 9.6e-22 109.0 213 35.7
CSS0016033 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 7.6e-19 99.4 63 76.2
CSS0017802 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 7.6e-19 99.4 63 76.2
ATR0579G174 Amborella trichopoda HOM05D006413 ORTHO05D007722 2.2e-18 97.8 156 38.5
Psat5g292640 Pisum sativum HOM05D006413 ORTHO05D007722 8.4e-18 95.9 81 59.3
CDE12G0173 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 4.1e-12 77.0 79 45.6
Solyc03g058437.1 Solanum lycopersicum HOM05D006413 ORTHO05D007722 9.0e-12 75.9 79 53.2


User provided reference genes

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