Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 4.3e-90 334.7 179 100.0
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 5.5e-53 211.5 180 67.8
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 1.6e-52 209.9 185 67.6
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 2.7e-52 209.1 185 64.9
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 9.7e-50 200.7 180 62.8
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 9.0e-48 194.1 187 63.6
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 7.7e-47 191.0 184 62.0
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 1.7e-46 189.9 180 61.1
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 3.8e-46 188.7 180 61.7
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 6.1e-44 181.4 180 58.9
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 1.4e-43 180.3 183 57.9
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 3.0e-43 179.1 180 59.4
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.5e-42 176.8 180 57.2
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 9.7e-42 174.1 180 57.8
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 9.7e-42 174.1 182 57.1
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 2.2e-41 172.9 180 57.2
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 4.8e-41 171.8 181 55.8
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 8.2e-41 171.0 181 59.1
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.4e-40 170.2 181 56.4
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 1.8e-40 169.9 181 58.6
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 2.4e-40 169.5 127 70.1
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.4e-40 169.5 181 56.4
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 2.4e-40 169.5 180 58.9
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 2.4e-40 169.5 180 57.2
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 9.1e-40 167.5 181 60.2
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.2e-39 167.2 139 69.1
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 1.5e-39 166.8 179 57.0
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 2.0e-39 166.4 127 69.3
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 2.0e-39 166.4 180 55.6
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 2.0e-39 166.4 174 57.5
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.6e-39 166.0 127 67.7
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 3.4e-39 165.6 184 54.3
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 7.7e-39 164.5 122 72.1
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.3e-38 163.7 190 54.7
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 1.7e-38 163.3 127 69.3
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 3.8e-38 162.2 180 53.3
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 3.8e-38 162.2 180 55.0
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 8.5e-38 161.0 181 53.0
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 1.1e-37 160.6 180 56.1
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.4e-37 160.2 185 54.6
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.9e-37 159.8 182 54.9
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 3.2e-37 159.1 182 53.8
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 5.5e-37 158.3 181 54.7
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 7.2e-37 157.9 181 58.6
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 9.4e-37 157.5 172 55.2
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 9.4e-37 157.5 126 66.7
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 2.7e-36 156.0 181 50.8
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 6.1e-36 154.8 183 53.0
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 7.9e-36 154.5 127 65.4
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 1.0e-35 154.1 178 52.8
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 1.0e-35 154.1 114 72.8
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 2.3e-35 152.9 172 54.1
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 1.5e-34 150.2 180 51.7
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 5.7e-34 148.3 190 51.6
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 7.4e-34 147.9 122 67.2
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 9.7e-34 147.5 172 54.7
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 1.7e-33 146.7 183 51.4
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 8.2e-33 144.4 132 59.8
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 3.1e-32 142.5 126 61.9
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 7.0e-32 141.4 176 54.0
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 1.2e-31 140.6 126 58.7
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.2e-31 140.6 126 60.3
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 2.0e-31 139.8 188 52.7
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 2.6e-31 139.4 179 50.3
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 4.5e-31 138.7 121 62.8
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 4.5e-31 138.7 188 48.9
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 7.7e-31 137.9 126 58.7
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.3e-30 137.1 191 48.2
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 1.3e-30 137.1 126 57.1
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 3.8e-30 135.6 126 59.5
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 6.5e-30 134.8 126 58.7
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 6.5e-30 134.8 126 58.7
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 8.5e-30 134.4 138 55.8
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 1.9e-29 133.3 145 53.1
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 4.2e-29 132.1 145 54.5
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 4.2e-29 132.1 145 54.5
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 4.2e-29 132.1 145 54.5
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 4.2e-29 132.1 134 57.5
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 3.6e-28 129.0 179 48.0
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 2.3e-27 126.3 143 54.5
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 3.0e-27 125.9 181 47.0
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 3.0e-27 125.9 188 46.3
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 6.7e-27 124.8 184 50.5
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 4.8e-25 118.6 195 43.6
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.1e-24 115.9 130 55.4
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 7.0e-24 114.8 179 43.6
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 7.0e-24 114.8 184 44.0
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 4.5e-23 112.1 190 44.2
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 1.3e-22 110.5 179 44.1
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 2.5e-21 106.3 140 49.3
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 2.1e-20 103.2 144 47.2
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 1.8e-19 100.1 125 48.0
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 1.8e-19 100.1 179 42.5
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 4.0e-19 99.0 179 40.2
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 2.6e-18 96.3 192 40.6
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 3.4e-18 95.9 194 39.7
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.2e-17 93.2 132 48.5
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 3.7e-17 92.4 175 41.7
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 4.8e-17 92.0 190 39.5
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 2.7e-15 86.3 183 39.9
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 1.0e-14 84.3 179 38.5
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 1.1e-13 80.9 136 39.7
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 3.2e-13 79.3 186 39.2
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 3.6e-12 75.9 110 47.3
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.6e-12 75.9 126 42.9
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 2.6e-10 69.7 72 50.0
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 9.1e-08 61.2 127 37.8
SGA_v2.0_scaffold90G27801 Striga asiatica HOM05D000069 ORTHO05D399115 1.7e-06 57.0 138 37.0


User provided reference genes

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