Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059672.2 Olea europaea HOM05D004280 ORTHO05D005059 3.5e-77 291.6 150 100.0
Migut.D02547 Erythranthe guttata HOM05D004280 ORTHO05D005059 1.0e-52 210.3 123 85.4
SGA_v2.0_scaffold13G06338 Striga asiatica HOM05D004280 ORTHO05D005059 1.3e-52 209.9 122 87.7
SGA_v2.0_scaffold329G48825 Striga asiatica HOM05D004280 ORTHO05D005059 1.3e-52 209.9 122 87.7
SGA_v2.0_scaffold552G52891 Striga asiatica HOM05D004280 ORTHO05D005059 1.3e-52 209.9 122 87.7
SGA_v2.0_scaffold693G53465 Striga asiatica HOM05D004280 ORTHO05D005059 1.3e-52 209.9 122 87.7
MSTRG.18872 Avicennia marina HOM05D004280 ORTHO05D005059 6.6e-52 207.6 123 85.4
DCAR_009024 Daucus carota HOM05D004280 ORTHO05D005059 8.6e-52 207.2 123 84.6
SGA_v2.0_scaffold738G53541 Striga asiatica HOM05D004280 ORTHO05D005059 1.1e-51 206.8 122 86.1
unitig_749.g13584 Utricularia gibba HOM05D004280 ORTHO05D005059 1.1e-51 206.8 123 83.7
SalBow4G3146 Salvia bowleyana HOM05D004280 ORTHO05D005059 2.5e-51 205.7 137 76.6
VMungo0647G2277 Vigna mungo HOM05D004280 ORTHO05D005059 7.3e-51 204.1 124 81.5
RcHm_v2.0_Chr4g0431981 Rosa chinensis HOM05D004280 ORTHO05D005059 1.6e-50 203.0 122 80.3
RcHm_v2.0_Chr5g0083141 Rosa chinensis HOM05D004280 ORTHO05D005059 1.6e-50 203.0 122 80.3
Dinv23876 Davidia involucrata HOM05D004280 ORTHO05D005059 2.1e-50 202.6 123 80.5
GSVIVG01025433001 Vitis vinifera HOM05D004280 ORTHO05D005059 2.1e-50 202.6 123 81.3
ECA233G4188 Erigeron canadensis HOM05D004280 ORTHO05D005059 4.7e-50 201.4 122 81.1
PGR102G2828 Punica granatum HOM05D004280 ORTHO05D005059 4.7e-50 201.4 130 77.7
Aqoxy7G03617 Aquilegia oxysepala HOM05D004280 ORTHO05D005059 6.2e-50 201.1 123 79.7
CSS0019544 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 6.2e-50 201.1 122 81.1
CSS0019811 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 6.2e-50 201.1 122 81.1
SalBow6G7108 Salvia bowleyana HOM05D004280 ORTHO05D005059 8.1e-50 200.7 123 80.5
ECA248G0362 Erigeron canadensis HOM05D004280 ORTHO05D005059 1.1e-49 200.3 122 81.1
Phvul.001G056600 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 1.4e-49 199.9 124 79.0
Prupe.6G007100 Prunus persica HOM05D004280 ORTHO05D005059 1.4e-49 199.9 122 77.9
Thecc.09G208500 Theobroma cacao HOM05D004280 ORTHO05D005059 1.4e-49 199.9 123 79.7
Glyma.06G309800 Glycine max HOM05D004280 ORTHO05D005059 1.8e-49 199.5 124 79.8
Glyma.14G130400 Glycine max HOM05D004280 ORTHO05D005059 1.8e-49 199.5 124 79.8
Hund03769 Selenicereus undatus HOM05D004280 ORTHO05D005059 1.8e-49 199.5 148 70.9
arahy.Tifrunner.gnm1.ann1.0AF3IJ Arachis hypogaea HOM05D004280 ORTHO05D005059 2.4e-49 199.1 126 77.8
AUR62032745 Chenopodium quinoa HOM05D004280 ORTHO05D005059 2.4e-49 199.1 123 79.7
FvH4_3g45340 Fragaria vesca HOM05D004280 ORTHO05D005059 2.4e-49 199.1 123 79.7
FAN25G1542 Fragaria x ananassa HOM05D004280 ORTHO05D005059 2.4e-49 199.1 123 79.7
TAR623G1159 Trochodendron aralioides HOM05D004280 ORTHO05D005059 2.4e-49 199.1 123 79.7
Cc01_g00630 Coffea canephora HOM05D004280 ORTHO05D005059 3.1e-49 198.7 124 80.6
MD11G1008600 Malus domestica HOM05D004280 ORTHO05D005059 4.0e-49 198.4 122 77.9
Cc05_g01230 Coffea canephora HOM05D004280 ORTHO05D005059 5.2e-49 198.0 124 79.8
HanXRQChr01g0021661 Helianthus annuus HOM05D004280 ORTHO05D005059 5.2e-49 198.0 122 80.3
Glyma.14G154000 Glycine max HOM05D004280 ORTHO05D005059 6.9e-49 197.6 124 79.0
SGA_v2.0_scaffold521G52700 Striga asiatica HOM05D004280 ORTHO05D005059 6.9e-49 197.6 138 76.8
SGA_v2.0_scaffold674G53431 Striga asiatica HOM05D004280 ORTHO05D005059 6.9e-49 197.6 138 76.8
Medtr3g083880 Medicago truncatula HOM05D004280 ORTHO05D005059 9.0e-49 197.2 124 78.2
Nn7g35895 Nelumbo nucifera HOM05D004280 ORTHO05D005059 9.0e-49 197.2 123 79.7
Rhsim09G0027500 Rhododendron simsii HOM05D004280 ORTHO05D005059 9.0e-49 197.2 124 78.2
RhsimUnG0194900 Rhododendron simsii HOM05D004280 ORTHO05D005059 9.0e-49 197.2 124 78.2
AUR62015306 Chenopodium quinoa HOM05D004280 ORTHO05D005059 1.2e-48 196.8 144 71.5
HPP92_017297 Vanilla planifolia HOM05D004280 ORTHO05D005059 1.2e-48 196.8 123 78.9
Haze_22956 Corylus avellana HOM05D004280 ORTHO05D005059 1.5e-48 196.4 125 77.6
Haze_22962 Corylus avellana HOM05D004280 ORTHO05D005059 1.5e-48 196.4 125 77.6
FAN11G0747 Fragaria x ananassa HOM05D004280 ORTHO05D005059 1.5e-48 196.4 123 78.9
vmacro00623 Vaccinium macrocarpon HOM05D004280 ORTHO05D005059 1.5e-48 196.4 125 77.6
Duzib170G0536 Durio zibethinus HOM05D004280 ORTHO05D005059 2.0e-48 196.1 130 75.4
MD03G1005700 Malus domestica HOM05D004280 ORTHO05D005059 2.0e-48 196.1 122 77.0
Ah.04g157750 Amaranthus hybridus HOM05D004280 ORTHO05D005059 4.4e-48 194.9 133 75.9
FAN21G3004 Fragaria x ananassa HOM05D004280 ORTHO05D005059 4.4e-48 194.9 123 78.0
Gohir.D08G021800 Gossypium hirsutum HOM05D004280 ORTHO05D005059 4.4e-48 194.9 123 77.2
Gorai.004G017100 Gossypium raimondii HOM05D004280 ORTHO05D005059 4.4e-48 194.9 123 77.2
Lj2A726G7 Lonicera japonica HOM05D004280 ORTHO05D005059 4.4e-48 194.9 123 79.7
COL.COLO4_35029 Corchorus olitorius HOM05D004280 ORTHO05D005059 5.8e-48 194.5 122 77.0
Hma1.2p1_0843F.1_g227335 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 5.8e-48 194.5 123 81.3
Hma1.2p1_0843F.1_g227340 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 5.8e-48 194.5 123 81.3
BcaB02g10831 Brassica carinata HOM05D004280 ORTHO05D005059 7.6e-48 194.1 123 78.9
CsaV3_5G026740 Cucumis sativus L. HOM05D004280 ORTHO05D005059 9.9e-48 193.7 123 78.9
Gohir.A08G011300 Gossypium hirsutum HOM05D004280 ORTHO05D005059 9.9e-48 193.7 123 76.4
Lj6g0003060 Lotus japonicus HOM05D004280 ORTHO05D005059 9.9e-48 193.7 124 77.4
Manes.01G036600 Manihot esculenta HOM05D004280 ORTHO05D005059 9.9e-48 193.7 123 78.0
SGA_v2.0_scaffold674G53436 Striga asiatica HOM05D004280 ORTHO05D005059 9.9e-48 193.7 139 74.1
MELO3C021620.2 Cucumis melo HOM05D004280 ORTHO05D005059 1.7e-47 193.0 123 78.0
Sc10g0001010 Simmondsia chinensis HOM05D004280 ORTHO05D005059 1.7e-47 193.0 122 79.5
PGSC0003DMG401025662 Solanum tuberosum HOM05D004280 ORTHO05D005059 1.7e-47 193.0 122 77.9
CANSAT01G2556 Cannabis sativa HOM05D004280 ORTHO05D005059 2.2e-47 192.6 128 78.1
FAN16G1471 Fragaria x ananassa HOM05D004280 ORTHO05D005059 2.2e-47 192.6 123 78.0
C06p10250 Brassica napus HOM05D004280 ORTHO05D005059 2.9e-47 192.2 123 77.2
BolC6t36098H Brassica oleracea HOM05D004280 ORTHO05D005059 2.9e-47 192.2 123 77.2
Ca_16394_v3 Cicer arietinum L. HOM05D004280 ORTHO05D005059 2.9e-47 192.2 124 75.8
MBI05_g32463_MAGBIO Magnolia biondii HOM05D004280 ORTHO05D005059 2.9e-47 192.2 123 78.9
QL01p008475 Quercus lobata HOM05D004280 ORTHO05D005059 2.9e-47 192.2 125 75.2
THA.LOC104822674 Tarenaya hassleriana HOM05D004280 ORTHO05D005059 2.9e-47 192.2 123 78.0
Glyma.11G173655 Glycine max HOM05D004280 ORTHO05D005059 3.8e-47 191.8 125 78.4
Sed0023881 Sechium edule HOM05D004280 ORTHO05D005059 3.8e-47 191.8 123 78.0
BcaC08g44186 Brassica carinata HOM05D004280 ORTHO05D005059 4.9e-47 191.4 123 78.0
A06p00280 Brassica napus HOM05D004280 ORTHO05D005059 4.9e-47 191.4 123 77.2
BolC6t36783H Brassica oleracea HOM05D004280 ORTHO05D005059 4.9e-47 191.4 123 78.0
BraA05t20650Z Brassica rapa HOM05D004280 ORTHO05D005059 4.9e-47 191.4 123 78.0
BraA06t23245Z Brassica rapa HOM05D004280 ORTHO05D005059 4.9e-47 191.4 123 77.2
Atru.chr1.3614 Acer truncatum HOM05D004280 ORTHO05D005059 6.4e-47 191.0 122 75.4
AT1G55300 Arabidopsis thaliana HOM05D004280 ORTHO05D005059 6.4e-47 191.0 123 77.2
Cpa.g.sc119.63 Carica papaya HOM05D004280 ORTHO05D005059 6.4e-47 191.0 123 76.4
CiPaw.13G175600 Carya illinoinensis HOM05D004280 ORTHO05D005059 6.4e-47 191.0 125 76.8
CiPaw.16G086400 Carya illinoinensis HOM05D004280 ORTHO05D005059 6.4e-47 191.0 125 76.0
Os05g0347000 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 6.4e-47 191.0 128 75.0
Peaxi162Scf01112g00112 Petunia axillaris HOM05D004280 ORTHO05D005059 6.4e-47 191.0 124 78.2
Zm00001eb233380 Zea mays HOM05D004280 ORTHO05D005059 6.4e-47 191.0 142 68.3
TPR.G24159 Trifolium pratense HOM05D004280 ORTHO05D005059 8.4e-47 190.7 124 75.8
Solyc04g076580.4 Solanum lycopersicum HOM05D004280 ORTHO05D005059 1.1e-46 190.3 122 77.9
Aa31LG10G1060 Aethionema arabicum HOM05D004280 ORTHO05D005059 1.4e-46 189.9 123 75.6
C06p15910 Brassica napus HOM05D004280 ORTHO05D005059 1.4e-46 189.9 123 76.4
Thhalv10011786m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 1.4e-46 189.9 123 76.4
CARHR044950 Cardamine hirsuta HOM05D004280 ORTHO05D005059 1.9e-46 189.5 123 76.4
Ciclev10016632m.g Citrus clementina HOM05D004280 ORTHO05D005059 1.9e-46 189.5 123 77.2
Ah.04g157660 Amaranthus hybridus HOM05D004280 ORTHO05D005059 3.2e-46 188.7 133 73.7
Duzib150G0115 Durio zibethinus HOM05D004280 ORTHO05D005059 3.2e-46 188.7 131 74.0
PGSC0003DMG400009351 Solanum tuberosum HOM05D004280 ORTHO05D005059 3.2e-46 188.7 138 69.6
TWI60G1521 Tripterygium wilfordii HOM05D004280 ORTHO05D005059 3.2e-46 188.7 123 74.8
A05p17570 Brassica napus HOM05D004280 ORTHO05D005059 4.2e-46 188.3 123 77.2
CAN.G193.6 Capsicum annuum HOM05D004280 ORTHO05D005059 4.2e-46 188.3 122 73.0
Carub.0001s4380 Capsella rubella HOM05D004280 ORTHO05D005059 5.4e-46 188.0 123 75.6
Eucgr.B03612 Eucalyptus grandis HOM05D004280 ORTHO05D005059 5.4e-46 188.0 123 78.0
Lsat_1_v5_gn_1_67700 Lactuca sativa HOM05D004280 ORTHO05D005059 7.1e-46 187.6 122 75.4
Potri.003G218700 Populus trichocarpa HOM05D004280 ORTHO05D005059 9.3e-46 187.2 123 75.6
Manes.04G095700 Manihot esculenta HOM05D004280 ORTHO05D005059 1.6e-45 186.4 123 74.8
Potri.001G006300 Populus trichocarpa HOM05D004280 ORTHO05D005059 1.6e-45 186.4 123 72.4
Sabra03G0163100 Salix brachista HOM05D004280 ORTHO05D005059 2.7e-45 185.7 123 74.0
Lsat_1_v5_gn_6_54260 Lactuca sativa HOM05D004280 ORTHO05D005059 3.5e-45 185.3 135 69.6
HanXRQChr13g0405321 Helianthus annuus HOM05D004280 ORTHO05D005059 4.6e-45 184.9 122 76.2
Sabra01G0004700 Salix brachista HOM05D004280 ORTHO05D005059 4.6e-45 184.9 123 71.5
Sp1g40960 Schrenkiella parvula HOM05D004280 ORTHO05D005059 4.6e-45 184.9 123 74.8
Psat5g102320 Pisum sativum HOM05D004280 ORTHO05D005059 6.0e-45 184.5 125 72.8
Zm00001eb395740 Zea mays HOM05D004280 ORTHO05D005059 1.0e-44 183.7 126 73.0
ClCG09G019650 Citrullus lanatus HOM05D004280 ORTHO05D005059 1.3e-44 183.3 138 69.6
Lalb_Chr08g0230321 Lupinus albus HOM05D004280 ORTHO05D005059 1.3e-44 183.3 135 70.4
Rhsim02G0077200 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.7e-44 183.0 123 76.4
Zm00001eb059570 Zea mays HOM05D004280 ORTHO05D005059 3.0e-44 182.2 142 65.5
PSO210G5203 Papaver somniferum HOM05D004280 ORTHO05D005059 3.9e-44 181.8 126 73.8
PSO761G0405 Papaver somniferum HOM05D004280 ORTHO05D005059 3.9e-44 181.8 126 73.8
ATR0681G021 Amborella trichopoda HOM05D004280 ORTHO05D005059 5.1e-44 181.4 123 75.6
Mapoly0011s0044 Marchantia polymorpha HOM05D004280 ORTHO05D005059 2.5e-43 179.1 123 73.2
AagrBONN_evm.TU.Sc2ySwM_344.2640 Anthoceros agrestis HOM05D004280 ORTHO05D005059 5.6e-43 177.9 123 69.9
SEGI_26181 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 7.3e-43 177.6 123 69.9
SEGI_04342 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 1.5e-40 169.9 123 68.3
Os01g0648500 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 3.4e-40 168.7 117 71.8
Zm00001eb068820 Zea mays HOM05D004280 ORTHO05D005059 5.8e-40 167.9 142 64.8
Pp3c14_18710 Physcomitrium patens HOM05D004280 ORTHO05D005059 9.9e-40 167.2 123 69.1
Pp3c1_41986 Physcomitrium patens HOM05D004280 ORTHO05D005059 1.4e-38 163.3 123 68.3
CBR_g22380 Chara braunii HOM05D004280 ORTHO05D005059 1.2e-37 160.2 123 65.0
Haze_22967 Corylus avellana HOM05D004280 ORTHO05D005059 7.9e-37 157.5 106 73.6
SMO146G0138 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 1.9e-35 152.9 132 58.3
Cc01_g02840 Coffea canephora HOM05D004280 ORTHO05D005059 5.6e-35 151.4 124 67.7
Nitab4.5_0000131g0050 Nicotiana tabacum HOM05D004280 ORTHO05D005059 4.8e-34 148.3 89 77.5
SGA_v2.0_scaffold6G03409 Striga asiatica HOM05D004280 ORTHO05D005059 3.1e-33 145.6 85 81.2
SGA_v2.0_scaffold2280G54098 Striga asiatica HOM05D004280 ORTHO05D005059 4.0e-33 145.2 84 85.7
Actinidia11301 Actinidia chinensis HOM05D004280 ORTHO05D005059 9.0e-33 144.1 89 83.1
Cc00_g23960 Coffea canephora HOM05D004280 ORTHO05D005059 5.8e-32 141.4 80 85.0
SMO169G0010 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 7.6e-32 141.0 130 56.2
Sed0016974 Sechium edule HOM05D004280 ORTHO05D005059 6.4e-31 137.9 122 59.0
Dinv13451 Davidia involucrata HOM05D004280 ORTHO05D005059 8.4e-31 137.5 93 76.3
AL1G63340 Arabidopsis lyrata HOM05D004280 ORTHO05D005059 1.2e-29 133.7 76 82.9
Phvul.001G056500 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 2.1e-29 132.9 76 81.6
Glyma.17G202802 Glycine max HOM05D004280 ORTHO05D005059 5.1e-28 128.3 77 80.5
Atru.chr7.1077 Acer truncatum HOM05D004280 ORTHO05D005059 8.7e-28 127.5 97 69.1
Cfa009582 Carpinus fangiana HOM05D004280 ORTHO05D005059 1.5e-27 126.7 144 50.7
Nitab4.5_0006954g0010 Nicotiana tabacum HOM05D004280 ORTHO05D005059 3.7e-26 122.1 67 83.6
AagrBONN_evm.TU.Sc2ySwM_362.2805 Anthoceros agrestis HOM05D004280 ORTHO05D005059 2.5e-22 109.4 96 57.3
Zm00001eb211560 Zea mays HOM05D004280 ORTHO05D005059 1.6e-21 106.7 149 46.3
Cre01.g011200 Chlamydomonas reinhardtii HOM05D004280 ORTHO05D005059 1.5e-16 90.1 122 39.3
Cc00_g20490 Coffea canephora HOM05D004280 ORTHO05D005059 2.2e-15 86.3 47 85.1
PRCOL_00003189 Prasinoderma coloniale HOM05D004280 ORTHO05D005059 8.5e-15 84.3 123 37.4
Sopen00g013070 Solanum pennellii HOM05D004280 ORTHO05D005059 3.6e-13 79.0 40 90.0
Thhalv10012232m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 1.8e-12 76.6 70 58.6
Cfa024345 Carpinus fangiana HOM05D004280 ORTHO05D122617 3.3e-11 72.4 139 36.0
EL10Ac4g09635 Beta vulgaris HOM05D004280 ORTHO05D005059 1.7e-10 70.1 77 51.9
unitig_26.g9445 Utricularia gibba HOM05D004280 ORTHO05D005059 9.1e-09 64.3 34 82.4
ECA233G4675 Erigeron canadensis HOM05D004280 ORTHO05D003273 5.0e-07 58.5 33 75.8


User provided reference genes

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