Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 3003.4 1494 100.0
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 1732.2 1537 60.4
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 1723.4 1571 59.2
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1627.1 1552 57.1
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1626.7 1499 59.4
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 1592.0 1589 56.1
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 1570.8 1566 55.4
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1570.8 1523 56.3
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 1570.4 1548 56.7
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1555.8 1542 56.2
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1545.4 1544 56.1
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1544.6 1544 55.4
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1516.9 1555 54.0
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1515.7 1538 55.3
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1513.8 1540 54.6
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1512.3 1555 54.0
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1483.8 1544 54.1
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1479.5 1556 53.7
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1475.3 1531 53.7
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1475.3 1542 53.6
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1471.8 1539 54.0
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 1470.7 1542 53.8
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1468.4 1534 54.0
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1464.5 1548 53.7
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1461.8 1543 53.7
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1458.7 1540 53.4
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1458.4 1539 53.9
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1454.5 1559 53.7
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1451.8 1547 53.2
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1448.3 1540 53.2
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1446.0 1508 54.3
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1439.1 1492 54.6
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1427.5 1573 52.4
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1423.7 1520 52.4
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1417.5 1555 52.1
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1416.4 1636 50.5
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1412.1 1346 56.7
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1408.7 1497 53.5
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1400.2 1538 50.9
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1392.1 1621 50.3
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1389.0 1514 52.0
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1388.6 1515 51.1
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1386.7 1535 51.9
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1378.2 1550 50.3
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1368.2 1540 51.3
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1368.2 1528 50.9
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1367.4 1525 51.4
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1361.3 1523 51.1
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1357.0 1538 49.5
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1356.7 1540 49.7
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1350.1 1526 50.5
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1350.1 1522 50.4
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1348.2 1542 50.3
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1339.3 1527 49.9
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1337.4 1529 49.5
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1333.9 1527 48.9
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1333.9 1530 50.6
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1322.0 1527 49.8
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1319.3 1531 48.7
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1316.6 1514 49.3
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1313.1 1534 48.9
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1310.0 1522 49.3
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1308.1 1528 48.7
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1304.7 1583 48.4
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1293.9 1526 48.3
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1291.9 1522 48.8
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1290.8 1533 48.7
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1288.1 1553 48.6
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1284.2 1523 48.5
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1283.5 1524 48.2
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1280.4 1528 47.9
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1278.8 1523 47.9
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1276.2 1525 48.0
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1276.2 1525 48.0
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1273.8 1543 47.7
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1266.5 1544 47.5
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1265.0 1524 47.8
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1264.2 1575 47.3
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1264.2 1535 48.3
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1254.2 1562 47.8
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1249.2 1535 47.7
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1246.9 1543 47.1
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1241.1 1372 52.8
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 1239.9 1536 46.6
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 0.0e+00 1197.6 1341 50.0
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1196.0 1373 51.8
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 1153.3 1598 43.9
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 0.0e+00 1144.4 1283 50.4
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 0.0e+00 1099.0 1151 54.1
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 0.0e+00 1089.7 1327 48.6
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1079.7 1554 42.9
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 1076.2 1555 43.8
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 1.5e-310 1070.1 1456 44.7
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 7.0e-295 1018.1 1114 53.1
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 3.2e-279 966.1 1552 39.6
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 3.4e-265 919.5 996 50.6
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 7.7e-217 758.8 1644 33.7
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 1.5e-199 701.4 900 44.6
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.3e-152 545.4 1030 35.3
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 1.8e-149 535.0 1505 28.6
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 4.9e-139 500.4 508 59.4
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 4.6e-137 493.8 511 56.9
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 7.6e-132 476.5 683 41.4
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 7.7e-100 370.2 394 52.3
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.7e-70 272.7 591 32.3
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.5e-55 223.0 183 62.8
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 3.1e-40 172.2 163 59.5
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 2.9e-38 165.6 104 75.0
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 1.4e-29 136.7 88 71.6
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 8.7e-27 127.5 87 65.5
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 8.1e-25 120.9 84 65.5
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 1.4e-24 120.2 89 58.4
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 1.9e-21 109.8 76 73.7
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 2.5e-18 99.4 67 77.6


User provided reference genes

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