Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 2.3e-188 662.1 352 100.0
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 2.7e-173 612.1 414 79.7
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 1.1e-169 600.1 382 80.1
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 3.1e-169 598.6 385 82.1
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 3.5e-168 595.1 385 79.2
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 5.9e-168 594.3 384 83.6
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 5.9e-168 594.3 372 83.9
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.9e-166 589.3 390 77.7
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 1.9e-166 589.3 390 79.7
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 7.2e-166 587.4 390 77.4
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 9.4e-166 587.0 383 81.5
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 1.2e-165 586.6 384 78.4
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 1.6e-165 586.3 382 83.0
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 2.7e-165 585.5 388 77.1
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.7e-165 585.5 386 80.8
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 2.7e-165 585.5 382 78.3
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 8.0e-165 583.9 390 80.0
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 1.0e-164 583.6 382 79.8
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 1.8e-164 582.8 382 81.9
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 2.3e-164 582.4 380 80.8
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 3.0e-164 582.0 384 77.3
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 3.0e-164 582.0 382 80.9
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 4.0e-164 581.6 385 80.0
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 8.8e-164 580.5 381 81.9
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 2.0e-163 579.3 412 75.7
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 3.4e-163 578.6 384 80.5
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 4.4e-163 578.2 383 79.9
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 5.7e-163 577.8 382 79.3
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 7.5e-163 577.4 382 80.4
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 7.5e-163 577.4 382 79.8
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 1.7e-162 576.2 382 79.3
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 2.8e-162 575.5 382 80.6
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 3.7e-162 575.1 382 79.1
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 4.8e-162 574.7 382 81.2
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 8.3e-162 573.9 384 79.2
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 8.3e-162 573.9 384 79.7
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.1e-161 573.5 384 77.9
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.4e-161 573.2 397 78.6
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 1.8e-161 572.8 380 78.7
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 2.4e-161 572.4 385 79.2
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 4.1e-161 571.6 384 79.4
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 4.1e-161 571.6 384 80.7
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 7.0e-161 570.9 382 79.3
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 7.0e-161 570.9 382 79.3
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 9.1e-161 570.5 384 77.1
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 9.1e-161 570.5 384 81.0
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 9.1e-161 570.5 385 75.8
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 9.1e-161 570.5 384 78.4
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 1.6e-160 569.7 372 81.5
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.0e-160 569.3 399 74.2
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 2.0e-160 569.3 384 79.2
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 3.5e-160 568.5 379 80.5
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 3.5e-160 568.5 384 81.0
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 3.5e-160 568.5 385 80.0
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 5.9e-160 567.8 380 79.5
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 7.7e-160 567.4 384 77.9
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 1.0e-159 567.0 382 79.1
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.9e-159 565.5 382 78.5
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 8.5e-159 563.9 385 80.5
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 1.1e-158 563.5 382 80.6
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 1.5e-158 563.1 382 80.6
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 4.2e-158 561.6 377 76.1
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 4.2e-158 561.6 382 79.6
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 5.5e-158 561.2 380 80.8
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 5.5e-158 561.2 365 81.1
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 7.2e-158 560.8 401 77.3
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 7.2e-158 560.8 384 77.1
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 9.4e-158 560.5 379 80.7
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 1.2e-157 560.1 403 73.4
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 2.7e-157 558.9 384 76.3
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 2.7e-157 558.9 384 78.4
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 4.7e-157 558.1 386 76.7
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 4.7e-157 558.1 381 79.8
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 6.1e-157 557.8 402 76.4
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.0e-156 557.0 384 76.0
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 1.0e-156 557.0 384 76.0
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 1.4e-156 556.6 382 79.3
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.8e-156 556.2 386 79.5
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 4.0e-156 555.1 382 74.9
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 5.2e-156 554.7 365 82.2
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 6.8e-156 554.3 365 82.2
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 6.8e-156 554.3 365 82.5
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 8.8e-156 553.9 391 77.7
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 5.7e-155 551.2 365 80.5
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 5.4e-153 544.7 384 74.7
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 7.0e-153 544.3 364 81.6
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 1.0e-151 540.4 328 83.2
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.5e-150 536.6 384 77.3
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.5e-150 536.6 384 77.3
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 1.5e-150 536.6 384 76.8
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 1.5e-150 536.6 329 82.4
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 1.9e-150 536.2 365 79.2
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.9e-150 536.2 384 77.6
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 2.5e-150 535.8 364 79.1
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 7.2e-150 534.3 382 77.5
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 7.2e-150 534.3 382 77.5
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 6.1e-149 531.2 381 75.6
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 4.9e-146 521.5 374 72.5
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 6.4e-146 521.2 380 71.3
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 8.3e-146 520.8 390 74.9
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 1.0e-143 513.8 363 72.7
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 8.6e-143 510.8 396 66.7
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 4.0e-140 501.9 375 69.9
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 6.8e-140 501.1 315 79.4
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 2.6e-139 499.2 370 69.5
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 3.4e-139 498.8 388 72.2
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 4.4e-139 498.4 388 72.2
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 3.7e-138 495.4 384 67.7
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 6.4e-138 494.6 379 65.7
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 6.0e-136 488.0 346 75.4
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.7e-135 486.5 382 70.7
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 5.0e-135 485.0 361 67.0
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 1.1e-134 483.8 361 67.3
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 6.2e-133 478.0 361 66.2
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 3.4e-123 445.7 283 79.5
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 9.2e-121 437.6 305 73.4
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.9e-118 429.9 311 70.4
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 6.2e-117 424.9 329 66.3
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 2.0e-115 419.9 329 64.7
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 4.4e-115 418.7 327 65.7
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 2.2e-114 416.4 329 64.4
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 2.9e-114 416.0 329 65.7
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 3.8e-114 415.6 329 65.0
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 9.3e-113 411.0 329 64.1
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 1.2e-112 410.6 327 64.5
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 1.2e-112 410.6 327 64.5
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 1.2e-112 410.6 327 64.5
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 3.0e-111 406.0 329 63.5
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 1.1e-110 404.1 303 74.6
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 1.5e-110 403.7 329 63.2
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 1.6e-109 400.2 394 62.7
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 1.5e-107 393.7 251 84.5
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 7.4e-102 374.8 268 72.0
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 8.4e-98 361.3 335 54.6
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.4e-97 360.5 330 55.8
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 2.4e-97 359.8 312 59.3
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 5.1e-95 352.1 282 63.8
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 5.1e-95 352.1 274 70.4
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.5e-86 323.2 300 61.3
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 2.4e-84 316.6 224 73.7
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 8.2e-69 265.0 197 68.5
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 2.9e-66 256.5 228 65.8
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 8.0e-56 221.9 184 64.1
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.7e-55 218.8 207 58.5
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 4.4e-54 216.1 183 59.6
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 2.7e-51 206.8 183 57.9
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 1.5e-49 201.1 114 82.5
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.3e-45 188.0 100 90.0
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 1.1e-44 184.9 275 41.5
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 4.1e-44 183.0 179 53.1
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 7.7e-43 178.7 173 53.2
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 5.5e-41 172.6 172 61.0
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 8.0e-40 168.7 311 35.7
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.7e-37 161.0 76 98.7
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 4.9e-37 159.5 179 49.7
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 8.3e-37 158.7 108 73.1
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 4.5e-35 152.9 108 70.4
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 5.9e-35 152.5 135 62.2
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 3.3e-33 146.7 161 46.6
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 5.6e-33 146.0 178 47.8
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.6e-32 144.4 76 85.5
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.0e-31 140.2 118 62.7
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 3.7e-29 133.3 107 64.5
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 8.3e-29 132.1 72 90.3
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 4.7e-24 116.3 74 77.0
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 1.7e-18 97.8 104 55.8
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 6.2e-16 89.4 42 100.0
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 8.1e-16 89.0 182 34.1
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 1.3e-13 81.6 49 81.6
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 9.2e-12 75.5 77 58.4
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 9.2e-12 75.5 77 58.4
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 9.2e-12 75.5 53 66.0
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 2.5e-09 67.4 36 88.9


User provided reference genes

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