Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.5e-32 142.1 68 100.0
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 2.0e-27 125.2 68 79.4
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 2.6e-27 124.8 68 83.8
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 2.6e-27 124.8 68 83.8
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 3.3e-27 124.4 66 80.3
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 4.4e-27 124.0 68 82.4
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 1.3e-26 122.5 68 82.4
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.2e-26 121.7 67 76.1
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.2e-26 121.7 67 76.1
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 2.8e-26 121.3 68 76.5
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 2.8e-26 121.3 68 77.9
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 4.8e-26 120.6 68 77.9
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 8.2e-26 119.8 68 76.5
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 8.2e-26 119.8 68 75.0
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.1e-25 119.4 67 77.6
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.4e-25 119.0 68 77.9
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.4e-25 119.0 68 76.5
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 1.4e-25 119.0 68 79.4
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.4e-25 119.0 68 76.5
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.8e-25 118.6 68 76.5
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 2.4e-25 118.2 68 73.5
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.4e-25 118.2 68 76.5
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.1e-25 117.9 68 73.5
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 4.1e-25 117.5 67 74.6
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 4.1e-25 117.5 68 76.5
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 5.3e-25 117.1 68 73.5
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 5.3e-25 117.1 68 75.0
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 5.3e-25 117.1 68 75.0
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 7.0e-25 116.7 68 76.5
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 9.1e-25 116.3 66 72.7
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 9.1e-25 116.3 68 76.5
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 9.1e-25 116.3 68 76.5
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.2e-24 115.9 68 75.0
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 1.6e-24 115.5 68 73.5
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.6e-24 115.5 68 75.0
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.6e-24 115.5 68 76.5
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.6e-24 115.5 67 76.1
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 2.0e-24 115.2 68 77.9
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 2.6e-24 114.8 68 76.5
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 3.5e-24 114.4 66 74.2
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 3.5e-24 114.4 59 83.1
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 4.5e-24 114.0 69 78.3
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 4.5e-24 114.0 68 75.0
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 4.5e-24 114.0 68 77.9
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 4.5e-24 114.0 68 72.1
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 5.9e-24 113.6 67 70.1
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.9e-24 113.6 68 72.1
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 5.9e-24 113.6 68 73.5
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 7.7e-24 113.2 68 75.0
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.0e-23 112.8 67 70.1
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.0e-23 112.8 69 73.9
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 1.0e-23 112.8 68 70.6
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.3e-23 112.5 59 83.1
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.3e-23 112.5 59 83.1
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.3e-23 112.5 59 83.1
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 1.3e-23 112.5 68 73.5
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 1.7e-23 112.1 68 72.1
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.2e-23 111.7 68 72.1
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 2.2e-23 111.7 68 69.1
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 2.2e-23 111.7 68 73.5
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 5.0e-23 110.5 68 70.6
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 5.0e-23 110.5 68 70.6
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 6.5e-23 110.2 68 69.1
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 6.5e-23 110.2 68 69.1
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 6.5e-23 110.2 68 70.6
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 6.5e-23 110.2 60 81.7
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 6.5e-23 110.2 70 70.0
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 8.5e-23 109.8 68 70.6
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 8.5e-23 109.8 68 73.5
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 8.5e-23 109.8 68 72.1
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 1.1e-22 109.4 68 69.1
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.5e-22 109.0 68 70.6
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.5e-22 109.0 69 73.9
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.5e-22 109.0 68 69.1
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 1.5e-22 109.0 68 69.1
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 2.5e-22 108.2 68 67.6
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 3.2e-22 107.8 80 62.5
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 3.2e-22 107.8 60 80.0
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 4.2e-22 107.5 62 75.8
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 4.2e-22 107.5 64 73.4
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 4.2e-22 107.5 68 70.6
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 2.1e-21 105.1 68 69.1
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 2.1e-21 105.1 68 64.7
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 2.1e-21 105.1 68 67.6
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 2.7e-21 104.8 58 77.6
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 3.6e-21 104.4 64 71.9
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 3.6e-21 104.4 64 71.9
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 3.6e-21 104.4 64 71.9
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 3.6e-21 104.4 68 72.1
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 8.0e-21 103.2 64 70.3
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 8.0e-21 103.2 64 71.9
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.0e-20 102.8 64 70.3
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.8e-20 102.1 68 66.2
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 4.0e-20 100.9 65 67.7
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.5e-19 99.0 67 64.2
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 1.5e-19 99.0 64 70.3
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 2.6e-19 98.2 67 64.2
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.3e-18 95.9 103 48.5
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 5.3e-17 90.5 68 55.9
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 2.7e-16 88.2 61 59.0
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 3.5e-16 87.8 66 56.1
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 1.0e-15 86.3 61 60.7
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 1.9e-14 82.0 44 84.1
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 5.5e-14 80.5 61 55.7
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 5.5e-14 80.5 44 79.5
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 9.4e-14 79.7 59 55.9
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 2.7e-13 78.2 44 75.0
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.8e-12 75.5 44 75.0
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 4.0e-12 74.3 65 50.8
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 5.2e-12 73.9 61 59.0
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 5.2e-12 73.9 44 70.5
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 2.6e-11 71.6 61 49.2
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 2.8e-10 68.2 44 68.2
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 7.0e-09 63.5 34 85.3
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.0e-07 59.7 44 65.9
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.9e-06 55.5 30 86.7
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 2.5e-06 55.1 31 80.6


User provided reference genes

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