Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 2.1e-21 104.8 52 100.0
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 2.0e-19 98.2 52 94.2
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 1.6e-13 78.6 52 71.2
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 4.7e-13 77.0 52 65.4
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 2.3e-12 74.7 52 67.3
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 8.8e-12 72.8 52 63.5
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 1.5e-11 72.0 50 64.0
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 2.0e-11 71.6 45 68.9
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 1.3e-10 68.9 50 62.0
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 1.7e-10 68.6 50 60.0
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 1.7e-10 68.6 52 61.5
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 2.8e-10 67.8 52 59.6
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 2.8e-10 67.8 49 63.3
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 4.8e-10 67.0 45 64.4
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 8.3e-10 66.2 51 68.6
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 1.1e-09 65.9 52 55.8
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.1e-09 65.9 52 55.8
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.4e-09 65.5 52 55.8
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 4.1e-09 63.9 52 55.8
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 4.1e-09 63.9 52 57.7
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 5.4e-09 63.5 52 53.8
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 7.0e-09 63.2 52 55.8
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.2e-08 62.4 52 53.8
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.2e-08 62.4 52 53.8
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.2e-08 62.4 52 53.8
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 1.2e-08 62.4 52 51.9
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 1.2e-08 62.4 52 53.8
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 1.2e-08 62.4 52 55.8
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 1.6e-08 62.0 47 57.4
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 2.0e-08 61.6 50 52.0
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 2.0e-08 61.6 50 52.0
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 2.0e-08 61.6 50 54.0
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 2.7e-08 61.2 47 55.3
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 3.5e-08 60.8 50 56.0
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 4.5e-08 60.5 50 50.0
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 7.7e-08 59.7 47 55.3
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 7.7e-08 59.7 43 58.1
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 1.0e-07 59.3 50 52.0
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 1.0e-07 59.3 43 60.5
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 1.0e-07 59.3 52 55.8
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 1.0e-07 59.3 52 50.0
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 1.3e-07 58.9 47 53.2
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 1.3e-07 58.9 45 60.0
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 1.3e-07 58.9 49 53.1
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 1.3e-07 58.9 52 50.0
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 1.7e-07 58.5 50 52.0
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 2.2e-07 58.2 42 57.1
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 2.9e-07 57.8 50 50.0
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 3.8e-07 57.4 45 53.3
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 5.0e-07 57.0 50 54.0
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 5.0e-07 57.0 45 60.0
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 5.0e-07 57.0 50 50.0
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 6.5e-07 56.6 49 53.1
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 8.5e-07 56.2 49 51.0
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 8.5e-07 56.2 45 53.3
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 8.5e-07 56.2 49 46.9
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 1.5e-06 55.5 51 47.1
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 1.9e-06 55.1 50 50.0
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 3.2e-06 54.3 49 46.9
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 4.2e-06 53.9 49 49.0
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 4.2e-06 53.9 49 49.0
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 4.2e-06 53.9 38 60.5
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 4.2e-06 53.9 48 50.0
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 4.2e-06 53.9 42 57.1
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 7.2e-06 53.1 44 50.0
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 9.5e-06 52.8 41 53.7
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 9.5e-06 52.8 41 53.7
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 9.5e-06 52.8 38 57.9
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 9.5e-06 52.8 43 53.5


User provided reference genes

Program Settings