Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 2.6e-98 362.1 187 100.0
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 5.1e-70 268.1 187 79.7
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 4.5e-50 201.8 186 60.2
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 8.0e-47 191.0 189 57.7
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 1.8e-46 189.9 188 56.4
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 8.8e-46 187.6 189 56.6
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 3.4e-45 185.7 168 62.5
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 6.3e-44 181.4 170 58.8
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 3.1e-43 179.1 174 60.3
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 7.0e-43 177.9 166 59.6
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 1.2e-42 177.2 188 57.4
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 2.0e-42 176.4 170 57.6
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 2.0e-42 176.4 188 55.9
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 4.5e-42 175.3 171 60.2
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 2.9e-41 172.6 188 53.7
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 5.0e-41 171.8 157 60.5
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 6.6e-41 171.4 166 57.8
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 8.6e-41 171.0 160 59.4
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 8.6e-41 171.0 153 62.7
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 8.6e-41 171.0 188 53.7
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 3.3e-40 169.1 169 57.4
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 5.6e-40 168.3 176 56.8
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 1.6e-39 166.8 170 57.6
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 2.1e-39 166.4 163 59.5
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 2.8e-39 166.0 183 53.6
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 2.8e-39 166.0 152 61.2
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.6e-39 165.6 176 56.2
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 4.7e-39 165.2 164 59.1
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 4.7e-39 165.2 173 57.2
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 6.1e-39 164.9 154 61.0
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 8.0e-39 164.5 175 54.3
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.0e-38 164.1 156 61.5
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 3.0e-38 162.5 176 55.7
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 4.0e-38 162.2 166 56.6
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 4.0e-38 162.2 158 58.2
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 4.0e-38 162.2 167 59.3
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 4.0e-38 162.2 170 56.5
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 4.0e-38 162.2 182 53.3
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 4.0e-38 162.2 161 57.1
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 5.2e-38 161.8 187 51.9
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 6.8e-38 161.4 170 57.6
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 6.8e-38 161.4 159 58.5
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 8.9e-38 161.0 187 52.4
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.5e-37 160.2 174 56.3
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 1.5e-37 160.2 168 57.7
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.5e-37 160.2 175 53.7
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 2.0e-37 159.8 190 53.2
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.6e-37 159.5 175 54.3
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 4.4e-37 158.7 158 60.1
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 4.4e-37 158.7 158 56.3
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 5.7e-37 158.3 160 58.1
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 7.5e-37 157.9 176 55.1
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 7.5e-37 157.9 160 58.1
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.5e-37 157.9 175 53.7
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 7.5e-37 157.9 165 57.0
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 7.5e-37 157.9 190 54.2
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 9.8e-37 157.5 160 58.1
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 9.8e-37 157.5 171 53.8
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.3e-36 157.1 160 57.5
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 1.3e-36 157.1 158 59.5
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.3e-36 157.1 154 58.4
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 1.7e-36 156.8 170 54.1
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 1.7e-36 156.8 154 59.7
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 2.2e-36 156.4 154 58.4
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 2.2e-36 156.4 156 58.3
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 2.9e-36 156.0 160 55.0
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 3.7e-36 155.6 165 55.2
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 4.9e-36 155.2 187 54.0
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 4.9e-36 155.2 162 56.8
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 4.9e-36 155.2 169 51.5
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 4.9e-36 155.2 162 53.7
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.4e-35 153.7 160 56.2
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 2.4e-35 152.9 159 56.6
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 2.4e-35 152.9 162 55.6
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 2.4e-35 152.9 153 55.6
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 2.4e-35 152.9 170 53.5
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 3.2e-35 152.5 154 55.8
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 3.2e-35 152.5 153 57.5
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 4.1e-35 152.1 159 56.0
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 5.4e-35 151.8 154 58.4
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 7.0e-35 151.4 162 54.9
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 1.6e-34 150.2 154 58.4
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 2.0e-34 149.8 167 52.1
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 2.0e-34 149.8 166 51.8
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 2.0e-34 149.8 176 50.0
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.7e-34 149.4 162 58.6
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 4.6e-34 148.7 163 55.2
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 4.6e-34 148.7 152 55.3
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 4.6e-34 148.7 156 55.1
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 4.6e-34 148.7 167 49.7
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 5.9e-34 148.3 163 55.8
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 5.9e-34 148.3 163 55.2
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 5.9e-34 148.3 162 54.3
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 5.9e-34 148.3 167 52.1
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 7.8e-34 147.9 167 52.1
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 7.8e-34 147.9 169 53.3
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 3.9e-33 145.6 77 92.2
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 3.9e-33 145.6 152 55.3
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 5.0e-33 145.2 152 53.9
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 8.6e-33 144.4 164 51.2
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 2.5e-32 142.9 163 54.6
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 2.5e-32 142.9 163 54.6
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 9.5e-32 141.0 115 68.7
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 9.5e-32 141.0 77 89.6
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 1.6e-31 140.2 187 48.1
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 2.8e-31 139.4 77 88.3
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 6.2e-31 138.3 148 53.4
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 8.0e-31 137.9 192 47.9
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 1.4e-30 137.1 161 49.7
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 1.2e-29 134.0 164 53.0
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 2.6e-29 132.9 85 80.0
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 4.4e-29 132.1 81 80.2
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 9.8e-29 131.0 187 45.5
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 1.3e-28 130.6 76 80.3
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 4.9e-28 128.6 77 80.5
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 7.0e-27 124.8 167 45.5
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 2.5e-24 116.3 138 52.2
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 1.1e-22 110.9 76 71.1
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.3e-22 109.8 76 69.7
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 6.8e-22 108.2 75 68.0
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 2.9e-20 102.8 75 65.3
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 6.4e-20 101.7 75 62.7
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 5.4e-19 98.6 124 47.6
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 7.1e-19 98.2 75 62.7
MSTRG.9877 Avicennia marina HOM05D006230 ORTHO05D007598 2.5e-16 89.7 91 59.3
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 9.5e-16 87.8 75 58.7
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 6.2e-15 85.1 75 54.7
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 9.6e-08 61.2 65 47.7
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 1.6e-07 60.5 36 86.1


User provided reference genes

Program Settings