Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 3.2e-47 191.4 99 100.0
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 7.3e-31 137.1 93 78.5
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 1.6e-30 136.0 92 76.1
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 3.4e-28 128.3 91 70.3
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 1.7e-24 115.9 89 68.5
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 1.6e-22 109.4 91 60.4
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 6.2e-22 107.5 88 61.4
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 4.0e-21 104.8 86 61.6
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 1.5e-20 102.8 86 59.3
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 1.7e-19 99.4 93 54.8
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.7e-19 99.4 75 61.3
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.9e-19 98.6 91 57.1
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 8.3e-19 97.1 93 55.9
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.1e-18 96.7 89 55.1
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 1.2e-17 93.2 89 57.3
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 7.8e-17 90.5 91 51.6
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 2.3e-16 89.0 89 53.9
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.5e-15 86.3 89 52.8
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 5.6e-15 84.3 90 54.4
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 9.5e-15 83.6 78 52.6
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.2e-14 83.2 89 55.1
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 6.2e-14 80.9 78 51.3
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 6.2e-14 80.9 90 52.2
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.4e-13 79.7 96 47.9
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.4e-13 79.7 96 51.0
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.8e-13 79.3 96 47.9
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 5.2e-13 77.8 89 51.7
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 6.8e-13 77.4 96 46.9
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 6.8e-13 77.4 78 50.0
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.2e-12 76.6 96 50.0
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.2e-12 76.6 78 50.0
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.2e-12 76.6 96 46.9
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 1.2e-12 76.6 84 50.0
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.2e-12 76.6 80 46.2
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 2.0e-12 75.9 78 48.7
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 2.6e-12 75.5 88 48.9
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 3.4e-12 75.1 97 47.4
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 3.4e-12 75.1 86 46.5
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 3.4e-12 75.1 89 48.3
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 4.4e-12 74.7 89 46.1
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 4.4e-12 74.7 95 46.3
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 5.8e-12 74.3 98 46.9
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 7.5e-12 73.9 83 50.6
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 7.5e-12 73.9 87 50.6
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 9.9e-12 73.6 95 45.3
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.3e-11 73.2 90 44.4
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.3e-11 73.2 89 47.2
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.3e-11 73.2 80 43.8
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 1.7e-11 72.8 86 46.5
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 2.9e-11 72.0 76 48.7
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 2.9e-11 72.0 82 51.2
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 3.7e-11 71.6 65 52.3
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 4.9e-11 71.2 89 47.2
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 1.4e-10 69.7 62 51.6
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.4e-10 68.9 59 49.2
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.4e-10 68.9 59 49.2
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 2.4e-10 68.9 78 43.6
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 5.4e-10 67.8 92 44.6
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 9.2e-10 67.0 88 45.5
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 1.6e-09 66.2 89 42.7
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 1.6e-09 66.2 91 42.9
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 2.7e-09 65.5 90 41.1
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 4.6e-09 64.7 90 38.9
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 7.8e-09 63.9 95 41.1
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 7.8e-09 63.9 62 45.2
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 1.0e-08 63.5 90 38.9
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 1.3e-08 63.2 84 39.3
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 1.3e-08 63.2 89 41.6
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 1.7e-08 62.8 90 43.3
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 2.3e-08 62.4 90 37.8
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 5.1e-08 61.2 46 60.9
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 5.1e-08 61.2 90 40.0
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 8.6e-08 60.5 95 37.9
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 8.6e-08 60.5 47 57.4
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 1.5e-07 59.7 62 41.9
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 1.5e-07 59.7 78 42.3
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 2.5e-07 58.9 88 40.9
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 7.3e-07 57.4 87 40.2
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 7.3e-07 57.4 75 42.7
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 1.6e-06 56.2 90 42.2
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.6e-06 56.2 88 37.5
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 4.7e-06 54.7 91 38.5


User provided reference genes

Program Settings