Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059393.1 Olea europaea HOM05D004684 ORTHO05D029065 4.0e-85 318.2 174 100.0
Eucgr.G01176 Eucalyptus grandis HOM05D004684 ORTHO05D006904 1.5e-34 150.2 114 72.8
Eucgr.H02859 Eucalyptus grandis HOM05D004684 ORTHO05D006904 1.5e-34 150.2 114 72.8
Cfa014797 Carpinus fangiana HOM05D004684 ORTHO05D006904 3.2e-34 149.1 114 71.9
Sopen09g033800 Solanum pennellii HOM05D004684 ORTHO05D006904 3.2e-34 149.1 114 72.8
CSS0041578 Camellia sinensis var. sinensis HOM05D004684 ORTHO05D006904 7.2e-34 147.9 114 71.9
QL02p071976 Quercus lobata HOM05D004684 ORTHO05D006904 1.2e-33 147.1 113 71.7
Lj3A639G13 Lonicera japonica HOM05D004684 ORTHO05D006904 1.6e-33 146.7 116 72.4
CSS0049189 Camellia sinensis var. sinensis HOM05D004684 ORTHO05D006904 2.1e-33 146.4 114 71.1
AUR62015690 Chenopodium quinoa HOM05D004684 ORTHO05D006904 2.1e-33 146.4 114 69.3
Haze_11481 Corylus avellana HOM05D004684 ORTHO05D006904 2.1e-33 146.4 114 70.2
vmacro08564 Vaccinium macrocarpon HOM05D004684 ORTHO05D006904 2.1e-33 146.4 114 72.8
Actinidia20844 Actinidia chinensis HOM05D004684 ORTHO05D006904 2.7e-33 146.0 114 70.2
Ah.04g153790 Amaranthus hybridus HOM05D004684 ORTHO05D006904 2.7e-33 146.0 114 71.1
CsaV3_2G012390 Cucumis sativus L. HOM05D004684 ORTHO05D006904 2.7e-33 146.0 114 70.2
Solyc09g090840.3 Solanum lycopersicum HOM05D004684 ORTHO05D006904 2.7e-33 146.0 113 70.8
CiPaw.01G176700 Carya illinoinensis HOM05D004684 ORTHO05D006904 3.6e-33 145.6 114 71.1
AUR62031623 Chenopodium quinoa HOM05D004684 ORTHO05D006904 4.7e-33 145.2 114 68.4
QL06p021563 Quercus lobata HOM05D004684 ORTHO05D006904 4.7e-33 145.2 113 69.9
Sed0004125 Sechium edule HOM05D004684 ORTHO05D006904 6.1e-33 144.8 114 70.2
unitig_748.g8291 Utricularia gibba HOM05D004684 ORTHO05D006904 6.1e-33 144.8 110 71.8
Nitab4.5_0001041g0120 Nicotiana tabacum HOM05D004684 ORTHO05D006904 8.0e-33 144.4 107 74.8
RcHm_v2.0_Chr7g0203561 Rosa chinensis HOM05D004684 ORTHO05D006904 8.0e-33 144.4 114 70.2
Thecc.04G266300 Theobroma cacao HOM05D004684 ORTHO05D006904 1.0e-32 144.1 114 70.2
CANSAT78G0903 Cannabis sativa HOM05D004684 ORTHO05D006904 1.4e-32 143.7 114 69.3
FvH4_4g05030 Fragaria vesca HOM05D004684 ORTHO05D006904 1.4e-32 143.7 114 69.3
TWI09G1097 Tripterygium wilfordii HOM05D004684 ORTHO05D006904 1.4e-32 143.7 114 70.2
arahy.Tifrunner.gnm1.ann1.14QJGF Arachis hypogaea HOM05D004684 ORTHO05D006904 1.8e-32 143.3 114 68.4
Cpa.g.sc59.16 Carica papaya HOM05D004684 ORTHO05D006904 1.8e-32 143.3 114 68.4
Lalb_Chr09g0330801 Lupinus albus HOM05D004684 ORTHO05D006904 2.3e-32 142.9 114 67.5
MD16G1228500 Malus domestica HOM05D004684 ORTHO05D006904 2.3e-32 142.9 114 68.4
PGR031G2768 Punica granatum HOM05D004684 ORTHO05D006904 2.3e-32 142.9 113 69.0
Rhsim04G0170900 Rhododendron simsii HOM05D004684 ORTHO05D006904 2.3e-32 142.9 114 70.2
Manes.03G157750 Manihot esculenta HOM05D004684 ORTHO05D006904 3.0e-32 142.5 114 69.3
Migut.G00560 Erythranthe guttata HOM05D004684 ORTHO05D006904 4.0e-32 142.1 114 69.3
RcHm_v2.0_Chr4g0395911 Rosa chinensis HOM05D004684 ORTHO05D006904 4.0e-32 142.1 114 69.3
Glyma.05G240000 Glycine max HOM05D004684 ORTHO05D006904 5.2e-32 141.7 109 70.6
Sc19g0005610 Simmondsia chinensis HOM05D004684 ORTHO05D006904 5.2e-32 141.7 114 66.7
arahy.Tifrunner.gnm1.ann1.1TG9FP Arachis hypogaea HOM05D004684 ORTHO05D006904 8.8e-32 141.0 114 67.5
Ciclev10004652m.g Citrus clementina HOM05D004684 ORTHO05D006904 1.2e-31 140.6 114 68.4
Prupe.1G050600 Prunus persica HOM05D004684 ORTHO05D006904 1.2e-31 140.6 114 68.4
Glyma.08G047100 Glycine max HOM05D004684 ORTHO05D006904 1.5e-31 140.2 114 67.5
Lj4g0013294 Lotus japonicus HOM05D004684 ORTHO05D006904 1.5e-31 140.2 114 67.5
Lalb_Chr05g0222141 Lupinus albus HOM05D004684 ORTHO05D006904 1.5e-31 140.2 109 68.8
Carub.0003s2695 Capsella rubella HOM05D004684 ORTHO05D006904 2.0e-31 139.8 114 68.4
THA.LOC104808741 Tarenaya hassleriana HOM05D004684 ORTHO05D006904 2.6e-31 139.4 114 66.7
Aqoxy5G00132 Aquilegia oxysepala HOM05D004684 ORTHO05D006904 3.4e-31 139.0 114 67.5
MELO3C023021.2 Cucumis melo HOM05D004684 ORTHO05D006904 3.4e-31 139.0 100 75.0
Duzib212G0777 Durio zibethinus HOM05D004684 ORTHO05D006904 3.4e-31 139.0 114 68.4
ECA248G0897 Erigeron canadensis HOM05D004684 ORTHO05D006904 3.4e-31 139.0 111 67.6
Lj4g0011200 Lotus japonicus HOM05D004684 ORTHO05D006904 4.4e-31 138.7 114 66.7
BcaB03g14590 Brassica carinata HOM05D004684 ORTHO05D006904 5.7e-31 138.3 114 67.5
Ca_04899_v3 Cicer arietinum L. HOM05D004684 ORTHO05D006904 5.7e-31 138.3 114 65.8
Duzib151G0232 Durio zibethinus HOM05D004684 ORTHO05D006904 5.7e-31 138.3 107 71.0
HanXRQChr01g0023061 Helianthus annuus HOM05D004684 ORTHO05D006904 5.7e-31 138.3 111 66.7
CDE02G2675 Ceratophyllum demersum HOM05D004684 ORTHO05D006904 7.5e-31 137.9 104 70.2
Gohir.D09G232200 Gossypium hirsutum HOM05D004684 ORTHO05D006904 7.5e-31 137.9 114 65.8
Gorai.006G255000 Gossypium raimondii HOM05D004684 ORTHO05D006904 7.5e-31 137.9 114 65.8
Psat2g106400 Pisum sativum HOM05D004684 ORTHO05D006904 7.5e-31 137.9 114 66.7
Sp3g22110 Schrenkiella parvula HOM05D004684 ORTHO05D006904 9.8e-31 137.5 114 66.7
AL3G43250 Arabidopsis lyrata HOM05D004684 ORTHO05D006904 1.3e-30 137.1 114 66.7
BcaC01g03327 Brassica carinata HOM05D004684 ORTHO05D006904 2.8e-30 136.0 114 64.9
Nn1g02992 Nelumbo nucifera HOM05D004684 ORTHO05D006904 2.8e-30 136.0 114 65.8
Hund24872 Selenicereus undatus HOM05D004684 ORTHO05D006904 2.8e-30 136.0 161 52.8
AT1G48520 Arabidopsis thaliana HOM05D004684 ORTHO05D006904 3.7e-30 135.6 114 65.8
Gohir.A09G231100 Gossypium hirsutum HOM05D004684 ORTHO05D006904 3.7e-30 135.6 114 64.9
CARHR100400 Cardamine hirsuta HOM05D004684 ORTHO05D006904 6.3e-30 134.8 111 66.7
Sabra10G0042300 Salix brachista HOM05D004684 ORTHO05D006904 6.3e-30 134.8 136 58.1
THA.LOC104804573 Tarenaya hassleriana HOM05D004684 ORTHO05D006904 6.3e-30 134.8 110 64.5
VMungo0251G0467 Vigna mungo HOM05D004684 ORTHO05D006904 6.3e-30 134.8 114 64.0
Psat2g046800 Pisum sativum HOM05D004684 ORTHO05D006904 1.1e-29 134.0 114 63.2
A03p43590 Brassica napus HOM05D004684 ORTHO05D006904 1.8e-29 133.3 114 64.0
BraA03t13496Z Brassica rapa HOM05D004684 ORTHO05D006904 1.8e-29 133.3 114 64.0
Thhalv10002467m.g Eutrema salsugineum HOM05D004684 ORTHO05D006904 1.8e-29 133.3 114 64.9
Medtr5g055940 Medicago truncatula HOM05D004684 ORTHO05D006904 1.8e-29 133.3 111 64.0
Phvul.002G322100 Phaseolus vulgaris HOM05D004684 ORTHO05D006904 1.8e-29 133.3 114 63.2
TPR.G38256 Trifolium pratense HOM05D004684 ORTHO05D006904 3.1e-29 132.5 114 64.0
Aa31LG8G11000 Aethionema arabicum HOM05D004684 ORTHO05D006904 4.1e-29 132.1 114 63.2
C03p53620 Brassica napus HOM05D004684 ORTHO05D006904 5.4e-29 131.7 114 63.2
BolC3t17622H Brassica oleracea HOM05D004684 ORTHO05D006904 5.4e-29 131.7 114 63.2
Potri.010G064700 Populus trichocarpa HOM05D004684 ORTHO05D006904 1.2e-28 130.6 114 64.0
Zm00001eb197630 Zea mays HOM05D004684 ORTHO05D006904 1.2e-28 130.6 112 65.2
ATR0787G095 Amborella trichopoda HOM05D004684 ORTHO05D006904 3.5e-28 129.0 113 63.7
PSO384G0234 Papaver somniferum HOM05D004684 ORTHO05D006904 3.5e-28 129.0 114 61.4
Os11g0544800 Oryza sativa ssp. japonica HOM05D004684 ORTHO05D006904 5.9e-28 128.3 114 64.0
Peaxi162Scf00531g00034 Petunia axillaris HOM05D004684 ORTHO05D006904 9.5e-26 120.9 66 90.9
ClCG06G007290 Citrullus lanatus HOM05D004684 ORTHO05D006904 6.1e-25 118.2 66 89.4
FAN12G2037 Fragaria x ananassa HOM05D004684 ORTHO05D006904 5.2e-24 115.2 66 86.4
SalBow2G2567 Salvia bowleyana HOM05D004684 ORTHO05D006904 5.2e-24 115.2 64 89.1
GSVIVG01027937001 Vitis vinifera HOM05D004684 ORTHO05D029065 5.2e-24 115.2 66 87.9
Potri.008G172700 Populus trichocarpa HOM05D004684 ORTHO05D006904 6.8e-24 114.8 114 57.9
Nitab4.5_0005154g0090 Nicotiana tabacum HOM05D004684 ORTHO05D006904 8.9e-24 114.4 66 86.4
EL10Ac3g06680 Beta vulgaris HOM05D004684 ORTHO05D006904 1.5e-23 113.6 66 83.3
FAN22G2229 Fragaria x ananassa HOM05D004684 ORTHO05D006904 5.7e-23 111.7 66 84.8
Dinv29794 Davidia involucrata HOM05D004684 ORTHO05D006904 9.8e-23 110.9 93 66.7
AagrBONN_evm.TU.Sc2ySwM_368.913 Anthoceros agrestis HOM05D004684 ORTHO05D006904 4.9e-22 108.6 111 55.0
Cc03_g06450 Coffea canephora HOM05D004684 ORTHO05D029065 8.3e-22 107.8 66 81.8
TAR636G2335 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.1e-21 107.5 93 62.4
Rhsim02G0163300 Rhododendron simsii HOM05D004684 ORTHO05D006904 1.8e-21 106.7 99 62.6
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 4.1e-21 105.5 110 53.6
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.6e-20 103.6 87 65.5
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.0e-19 100.9 82 65.9
Mapoly0107s0036 Marchantia polymorpha HOM05D004684 ORTHO05D006904 2.9e-19 99.4 110 49.1
MD13G1223600 Malus domestica HOM05D004684 ORTHO05D029065 1.1e-18 97.4 57 84.2
CBR_g20386 Chara braunii HOM05D004684 ORTHO05D006904 2.8e-17 92.8 111 45.0
MBI07_g08913_MAGBIO Magnolia biondii HOM05D004684 ORTHO05D006904 2.8e-17 92.8 87 58.6
SMO147G0416 Selaginella moellendorffii HOM05D004684 ORTHO05D006904 1.5e-15 87.0 109 44.0
MCO15G005 Micromonas commoda HOM05D004684 ORTHO05D006904 5.8e-15 85.1 65 61.5
PRCOL_00005018 Prasinoderma coloniale HOM05D004684 ORTHO05D006904 9.8e-15 84.3 114 41.2
SMO273G0058 Selaginella moellendorffii HOM05D004684 ORTHO05D006904 3.5e-12 75.9 61 54.1
PGSC0003DMG400001555 Solanum tuberosum HOM05D004684 ORTHO05D006904 3.9e-11 72.4 39 87.2
Lsat_1_v5_gn_1_75460 Lactuca sativa HOM05D004684 ORTHO05D006904 1.1e-10 70.9 111 48.6
Pp3s32_289 Physcomitrium patens HOM05D004684 ORTHO05D006904 4.0e-08 62.4 105 32.4
BcaC06g35681 Brassica carinata HOM05D004684 ORTHO05D008836 1.7e-06 57.0 36 72.2
A07p08010 Brassica napus HOM05D004684 ORTHO05D027888 3.7e-06 55.8 78 46.2
C07p12070 Brassica napus HOM05D004684 ORTHO05D027888 3.7e-06 55.8 78 46.2
BraA07t28588Z Brassica rapa HOM05D004684 ORTHO05D027888 3.7e-06 55.8 78 46.2


User provided reference genes

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