Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059364.1 Olea europaea HOM05D004531 ORTHO05D290784 3.5e-60 235.3 175 100.0
Oeu059360.1 Olea europaea HOM05D004531 ORTHO05D005484 7.3e-34 147.9 175 53.1
Oeu059357.1 Olea europaea HOM05D004531 ORTHO05D005484 2.1e-17 93.2 58 82.8
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 3.0e-11 72.8 69 55.1
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 3.9e-11 72.4 61 54.1
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 6.6e-11 71.6 61 57.4
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 6.6e-11 71.6 61 59.0
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 8.6e-11 71.2 61 57.4
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 8.6e-11 71.2 61 57.4
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 8.6e-11 71.2 69 53.6
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.1e-10 70.9 61 55.7
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 1.5e-10 70.5 61 59.0
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 1.5e-10 70.5 69 50.7
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 1.9e-10 70.1 61 57.4
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 1.9e-10 70.1 61 52.5
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 2.5e-10 69.7 61 55.7
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 2.5e-10 69.7 61 57.4
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 3.3e-10 69.3 61 54.1
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 3.3e-10 69.3 61 54.1
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 3.3e-10 69.3 61 59.0
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 4.3e-10 68.9 69 50.7
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 4.3e-10 68.9 61 59.0
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 4.3e-10 68.9 61 55.7
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 5.6e-10 68.6 61 54.1
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 5.6e-10 68.6 61 54.1
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 7.3e-10 68.2 71 52.1
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 7.3e-10 68.2 61 55.7
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 7.3e-10 68.2 61 54.1
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 7.3e-10 68.2 61 54.1
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 7.3e-10 68.2 61 55.7
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 9.6e-10 67.8 61 52.5
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 9.6e-10 67.8 61 54.1
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 9.6e-10 67.8 61 55.7
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 2.1e-09 66.6 69 49.3
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 3.6e-09 65.9 61 52.5
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 6.2e-09 65.1 69 46.4
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 6.2e-09 65.1 61 52.5
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.1e-08 64.3 61 50.8
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 1.1e-08 64.3 61 50.8
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 1.1e-08 64.3 61 52.5
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 1.1e-08 64.3 61 47.5
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 1.1e-08 64.3 61 50.8
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 1.1e-08 64.3 61 50.8
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 1.1e-08 64.3 61 52.5
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 1.1e-08 64.3 61 54.1
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 1.4e-08 63.9 61 52.5
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.4e-08 63.9 61 50.8
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 1.8e-08 63.5 61 50.8
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 1.8e-08 63.5 67 50.7
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 2.4e-08 63.2 61 49.2
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 3.1e-08 62.8 61 49.2
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 3.1e-08 62.8 69 46.4
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 3.1e-08 62.8 76 47.4
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 4.0e-08 62.4 61 50.8
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 4.0e-08 62.4 61 49.2
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 5.2e-08 62.0 61 45.9
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 6.8e-08 61.6 84 44.0
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 6.8e-08 61.6 61 50.8
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 6.8e-08 61.6 61 50.8
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 6.8e-08 61.6 61 50.8
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 8.9e-08 61.2 61 49.2
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 1.2e-07 60.8 61 47.5
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 1.2e-07 60.8 61 49.2
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 1.2e-07 60.8 61 49.2
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 1.2e-07 60.8 61 47.5
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 1.5e-07 60.5 61 45.9
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 1.5e-07 60.5 61 49.2
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.5e-07 60.5 69 44.9
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 1.5e-07 60.5 69 47.8
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 1.5e-07 60.5 69 47.8
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 2.0e-07 60.1 61 49.2
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 2.0e-07 60.1 69 44.9
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 2.6e-07 59.7 61 49.2
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 3.4e-07 59.3 61 45.9
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 3.4e-07 59.3 69 44.9
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 3.4e-07 59.3 69 44.9
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 3.4e-07 59.3 61 45.9
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 4.4e-07 58.9 68 45.6
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 4.4e-07 58.9 61 47.5
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 4.4e-07 58.9 69 46.4
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 4.4e-07 58.9 61 50.8
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 5.8e-07 58.5 69 44.9
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 5.8e-07 58.5 69 44.9
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 5.8e-07 58.5 69 44.9
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 5.8e-07 58.5 61 47.5
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 5.8e-07 58.5 69 47.8
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 7.6e-07 58.2 60 46.7
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 9.9e-07 57.8 69 43.5
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 9.9e-07 57.8 61 47.5
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 1.3e-06 57.4 69 43.5
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 1.3e-06 57.4 61 45.9
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 1.7e-06 57.0 69 46.4
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 1.7e-06 57.0 61 45.9
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 1.7e-06 57.0 61 45.9
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 2.2e-06 56.6 61 45.9
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 2.2e-06 56.6 61 45.9
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 2.2e-06 56.6 61 45.9
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 2.2e-06 56.6 61 45.9
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 2.9e-06 56.2 61 45.9
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 2.9e-06 56.2 61 45.9
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 2.9e-06 56.2 61 45.9
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 3.8e-06 55.8 69 43.5
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 3.8e-06 55.8 69 42.0
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 3.8e-06 55.8 60 46.7
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 3.8e-06 55.8 69 44.9
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 4.9e-06 55.5 61 47.5
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 4.9e-06 55.5 61 45.9
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 6.4e-06 55.1 61 45.9
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 8.4e-06 54.7 61 44.3
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 8.4e-06 54.7 69 43.5


User provided reference genes

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