Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059357.1 Olea europaea HOM05D004531 ORTHO05D005484 3.0e-24 114.4 59 100.0
Oeu059360.1 Olea europaea HOM05D004531 ORTHO05D005484 9.7e-23 109.4 58 96.6
Oeu059364.1 Olea europaea HOM05D004531 ORTHO05D290784 1.9e-18 95.1 58 82.8
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 4.2e-10 67.4 41 78.0
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 5.5e-10 67.0 50 62.0
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 2.1e-09 65.1 41 75.6
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 2.7e-09 64.7 44 68.2
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 2.7e-09 64.7 50 60.0
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 3.6e-09 64.3 50 62.0
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 3.6e-09 64.3 50 60.0
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 4.7e-09 63.9 50 58.0
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 6.1e-09 63.5 41 73.2
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 7.9e-09 63.2 41 70.7
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 7.9e-09 63.2 50 62.0
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 1.0e-08 62.8 41 73.2
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 1.0e-08 62.8 50 60.0
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 1.0e-08 62.8 41 70.7
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 1.4e-08 62.4 50 60.0
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 1.8e-08 62.0 50 60.0
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 1.8e-08 62.0 50 60.0
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 2.3e-08 61.6 41 70.7
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 2.3e-08 61.6 41 68.3
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 2.3e-08 61.6 41 70.7
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 3.9e-08 60.8 50 54.0
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 3.9e-08 60.8 41 68.3
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 3.9e-08 60.8 41 68.3
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 3.9e-08 60.8 41 68.3
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 3.9e-08 60.8 50 58.0
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 3.9e-08 60.8 44 63.6
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 3.9e-08 60.8 41 70.7
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 3.9e-08 60.8 50 58.0
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 3.9e-08 60.8 50 58.0
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 5.1e-08 60.5 50 58.0
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 5.1e-08 60.5 41 70.7
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 5.1e-08 60.5 41 68.3
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 6.7e-08 60.1 41 65.9
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 6.7e-08 60.1 41 68.3
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 8.8e-08 59.7 41 65.9
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 8.8e-08 59.7 41 65.9
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 8.8e-08 59.7 41 65.9
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 8.8e-08 59.7 41 68.3
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 8.8e-08 59.7 50 58.0
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 8.8e-08 59.7 41 68.3
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 8.8e-08 59.7 41 68.3
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 1.1e-07 59.3 50 54.0
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.1e-07 59.3 41 65.9
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 1.1e-07 59.3 41 65.9
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 1.1e-07 59.3 41 68.3
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 1.1e-07 59.3 41 65.9
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 1.1e-07 59.3 41 63.4
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 1.1e-07 59.3 50 56.0
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 1.5e-07 58.9 50 54.0
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.5e-07 58.9 41 63.4
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 1.5e-07 58.9 41 65.9
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.5e-07 58.9 41 65.9
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 1.5e-07 58.9 41 65.9
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.5e-07 58.9 41 68.3
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 2.0e-07 58.5 41 65.9
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 2.0e-07 58.5 41 68.3
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 2.6e-07 58.2 52 55.8
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 2.6e-07 58.2 41 63.4
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 3.3e-07 57.8 40 65.0
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 4.4e-07 57.4 50 52.0
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 5.7e-07 57.0 41 65.9
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 5.7e-07 57.0 50 56.0
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 5.7e-07 57.0 50 56.0
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 5.7e-07 57.0 50 56.0
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 5.7e-07 57.0 40 67.5
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 7.4e-07 56.6 41 63.4
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 7.4e-07 56.6 41 63.4
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 7.4e-07 56.6 41 63.4
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 7.4e-07 56.6 41 63.4
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 7.4e-07 56.6 44 59.1
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 7.4e-07 56.6 41 63.4
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 7.4e-07 56.6 41 63.4
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 9.7e-07 56.2 41 65.9
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 9.7e-07 56.2 41 63.4
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 9.7e-07 56.2 52 59.6
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 9.7e-07 56.2 41 63.4
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 9.7e-07 56.2 50 56.0
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 1.3e-06 55.8 41 63.4
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 1.3e-06 55.8 41 63.4
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 1.3e-06 55.8 41 63.4
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 1.3e-06 55.8 41 61.0
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 63.4
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 63.4
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 63.4
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 63.4
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 63.4
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 63.4
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 61.0
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 63.4
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 1.7e-06 55.5 41 65.9
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 2.2e-06 55.1 41 61.0
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 2.2e-06 55.1 41 63.4
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 2.2e-06 55.1 41 63.4
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 2.2e-06 55.1 41 63.4
Ca_08745_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 2.8e-06 54.7 41 58.5
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 3.7e-06 54.3 41 63.4
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 3.7e-06 54.3 40 65.0
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 3.7e-06 54.3 40 65.0
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 3.7e-06 54.3 41 61.0
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 3.7e-06 54.3 41 63.4
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 3.7e-06 54.3 41 61.0
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 3.7e-06 54.3 41 58.5
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 4.8e-06 53.9 41 61.0
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 4.8e-06 53.9 41 61.0
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 4.8e-06 53.9 41 61.0
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 4.8e-06 53.9 41 61.0
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 8.2e-06 53.1 41 61.0


User provided reference genes

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