Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 6.7e-123 444.1 239 100.0
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 1.2e-68 263.8 238 68.5
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 1.1e-51 207.6 243 56.0
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 3.8e-49 199.1 237 54.9
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.8e-44 183.0 237 53.2
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 3.4e-42 176.0 230 50.4
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 4.9e-41 172.2 236 47.9
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 4.9e-41 172.2 229 50.2
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 1.4e-40 170.6 229 50.2
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 9.3e-40 167.9 238 48.3
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 3.9e-38 162.5 243 46.9
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 1.1e-37 161.0 197 52.8
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 4.8e-36 155.6 171 56.7
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 5.3e-35 152.1 235 47.2
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 3.4e-34 149.4 195 53.3
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 1.7e-33 147.1 237 43.9
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 1.4e-32 144.1 238 43.3
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 1.2e-31 141.0 236 44.1
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 2.7e-31 139.8 177 53.7
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 3.5e-31 139.4 181 47.0
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 3.5e-31 139.4 235 46.0
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 4.6e-31 139.0 236 43.2
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 6.0e-31 138.7 207 49.8
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 6.0e-31 138.7 216 42.6
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 7.9e-31 138.3 234 44.4
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 1.0e-30 137.9 236 43.6
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 2.3e-30 136.7 235 43.0
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 3.0e-30 136.3 152 53.9
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 1.5e-29 134.0 242 39.7
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 1.9e-29 133.7 235 42.6
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 7.4e-29 131.7 200 42.5
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 7.4e-29 131.7 202 47.5
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 1.3e-28 131.0 150 50.7
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 2.1e-28 130.2 233 39.9
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 2.1e-28 130.2 213 45.5
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 3.7e-28 129.4 223 42.2
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 4.8e-28 129.0 235 41.7
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 4.8e-28 129.0 235 41.7
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 8.1e-28 128.3 145 51.0
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 8.1e-28 128.3 145 51.0
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 8.1e-28 128.3 145 51.0
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 8.1e-28 128.3 148 50.0
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 1.1e-27 127.9 214 45.8
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 1.8e-27 127.1 230 41.3
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 5.3e-27 125.6 226 39.8
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 6.9e-27 125.2 207 43.5
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 9.0e-27 124.8 145 49.7
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 1.2e-26 124.4 152 50.0
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 2.0e-26 123.6 207 43.5
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.6e-26 123.2 175 44.6
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.6e-26 123.2 175 44.6
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 3.4e-26 122.9 145 49.0
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 4.5e-26 122.5 238 39.1
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 9.9e-26 121.3 207 43.0
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.2e-25 120.2 227 38.8
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 2.9e-25 119.8 186 45.7
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 3.8e-25 119.4 227 37.9
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 4.9e-25 119.0 203 39.9
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 6.4e-25 118.6 184 43.5
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 1.4e-24 117.5 195 40.0
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.4e-24 117.5 236 38.1
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 5.5e-24 115.5 244 37.7
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 9.3e-24 114.8 184 42.4
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 1.6e-23 114.0 199 39.2
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 6.0e-23 112.1 229 37.6
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 1.3e-22 110.9 147 47.6
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 6.7e-22 108.6 200 44.0
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 8.7e-22 108.2 234 38.5
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 1.9e-21 107.1 146 47.9
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 1.6e-20 104.0 235 34.5
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 2.8e-20 103.2 78 66.7
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 4.8e-20 102.4 76 72.4
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 8.2e-20 101.7 77 68.8
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 1.4e-19 100.9 239 34.3
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 3.1e-19 99.8 182 44.0
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 5.3e-19 99.0 83 62.7
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 9.0e-19 98.2 217 38.7
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 1.5e-18 97.4 184 35.3
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 2.6e-18 96.7 76 67.1
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 3.4e-18 96.3 74 64.9
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 4.5e-18 95.9 233 37.3
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 4.5e-18 95.9 242 31.8
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 3.8e-17 92.8 76 57.9
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 1.1e-16 91.3 228 34.6
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 5.5e-16 89.0 122 45.1
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 1.6e-15 87.4 107 54.2
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 3.5e-15 86.3 148 40.5
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 6.0e-15 85.5 139 41.0
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 1.8e-14 84.0 190 36.3
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 3.0e-14 83.2 48 91.7
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 6.7e-14 82.0 59 72.9
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 1.1e-13 81.3 71 59.2
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 2.5e-13 80.1 59 71.2
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 5.7e-13 79.0 78 48.7
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 9.0e-11 71.6 86 52.3
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 1.2e-10 71.2 57 64.9
Nitab4.5_0018136g0010 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.7e-09 67.4 101 45.5
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 2.9e-09 66.6 54 59.3
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 2.9e-09 66.6 54 59.3
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 1.1e-08 64.7 47 68.1
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 1.9e-08 63.9 118 33.1
PGR031G1183 Punica granatum HOM05D007357 ORTHO05D009314 7.2e-08 62.0 50 62.0


User provided reference genes

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