Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059301.1 Olea europaea HOM05D002892 ORTHO05D292370 3.3e-214 748.0 366 100.0
Oeu059298.1 Olea europaea HOM05D002892 ORTHO05D288095 7.0e-188 660.6 350 93.4
Oeu059303.1 Olea europaea HOM05D002892 ORTHO05D003224 1.6e-99 367.1 342 58.8
Oeu059304.1 Olea europaea HOM05D002892 ORTHO05D003224 1.6e-99 367.1 342 58.8
Oeu043283.1 Olea europaea HOM05D002892 ORTHO05D003224 8.3e-56 221.9 206 57.8
SalBow2G2169 Salvia bowleyana HOM05D002892 ORTHO05D003224 1.7e-24 117.9 208 38.9
MSTRG.4258 Avicennia marina HOM05D002892 ORTHO05D003224 3.8e-24 116.7 220 38.2
Gohir.D10G136200 Gossypium hirsutum HOM05D002892 ORTHO05D003224 1.1e-23 115.2 218 36.7
TPR.G11829 Trifolium pratense HOM05D002892 ORTHO05D003224 1.9e-23 114.4 217 39.2
Gorai.011G151000 Gossypium raimondii HOM05D002892 ORTHO05D003224 2.4e-23 114.0 218 36.7
Hund19023 Selenicereus undatus HOM05D002892 ORTHO05D003224 2.4e-23 114.0 216 40.3
Nitab4.5_0000037g0190 Nicotiana tabacum HOM05D002892 ORTHO05D003224 4.1e-23 113.2 230 37.4
Medtr8g081030 Medicago truncatula HOM05D002892 ORTHO05D003224 1.2e-22 111.7 214 39.3
Thecc.04G191900 Theobroma cacao HOM05D002892 ORTHO05D003224 1.2e-22 111.7 218 36.7
Duzib268G0514 Durio zibethinus HOM05D002892 ORTHO05D003224 2.1e-22 110.9 218 36.2
Migut.G00949 Erythranthe guttata HOM05D002892 ORTHO05D003224 2.1e-22 110.9 215 36.7
Aqoxy2G04043 Aquilegia oxysepala HOM05D002892 ORTHO05D003224 2.7e-22 110.5 214 35.0
PSO017G1890 Papaver somniferum HOM05D002892 ORTHO05D003224 2.7e-22 110.5 218 36.7
Psat7g076520 Pisum sativum HOM05D002892 ORTHO05D003224 2.7e-22 110.5 214 36.4
Thecc.04G192000 Theobroma cacao HOM05D002892 ORTHO05D003224 2.7e-22 110.5 215 39.1
Cpa.g.sc157.20 Carica papaya HOM05D002892 ORTHO05D003224 3.5e-22 110.2 222 35.1
Gohir.A10G130100 Gossypium hirsutum HOM05D002892 ORTHO05D003224 3.5e-22 110.2 218 35.8
arahy.Tifrunner.gnm1.ann1.CJD5DY Arachis hypogaea HOM05D002892 ORTHO05D003224 4.6e-22 109.8 212 38.7
Cfa008658 Carpinus fangiana HOM05D002892 ORTHO05D003224 4.6e-22 109.8 214 36.0
CiPaw.01G113900 Carya illinoinensis HOM05D002892 ORTHO05D003224 4.6e-22 109.8 214 36.0
ECA238G4530 Erigeron canadensis HOM05D007777 ORTHO05D007255 6.0e-22 109.4 211 37.4
Potri.002G236000 Populus trichocarpa HOM05D002892 ORTHO05D003224 6.0e-22 109.4 214 38.3
CARHR099700 Cardamine hirsuta HOM05D002892 ORTHO05D003224 7.8e-22 109.0 212 37.3
MELO3C026126.2 Cucumis melo HOM05D002892 ORTHO05D003224 7.8e-22 109.0 214 35.5
CsaV3_6G003080 Cucumis sativus L. HOM05D002892 ORTHO05D003224 7.8e-22 109.0 214 35.5
Hma1.2p1_1457F.1_g284670 Hydrangea macrophylla HOM05D002892 ORTHO05D003224 7.8e-22 109.0 218 37.6
COL.COLO4_04284 Corchorus olitorius HOM05D002892 ORTHO05D003224 1.0e-21 108.6 218 36.2
Actinidia24786 Actinidia chinensis HOM05D002892 ORTHO05D003224 1.3e-21 108.2 218 36.7
Lalb_Chr12g0205811 Lupinus albus HOM05D002892 ORTHO05D003224 1.3e-21 108.2 211 36.0
Eucgr.L00633 Eucalyptus grandis HOM05D002892 ORTHO05D003224 1.7e-21 107.8 212 38.2
PSO063G1354 Papaver somniferum HOM05D002892 ORTHO05D003224 1.7e-21 107.8 218 36.7
FvH4_4g12880 Fragaria vesca HOM05D002892 ORTHO05D003224 2.3e-21 107.5 211 38.4
Sabra02G0179800 Salix brachista HOM05D002892 ORTHO05D003224 2.3e-21 107.5 221 37.6
Ca_18006_v3 Cicer arietinum L. HOM05D002892 ORTHO05D003224 3.0e-21 107.1 208 37.5
Solyc09g092530.4 Solanum lycopersicum HOM05D002892 ORTHO05D003224 3.9e-21 106.7 213 37.1
Sopen09g035430 Solanum pennellii HOM05D002892 ORTHO05D003224 3.9e-21 106.7 213 37.1
CANSAT78G1570 Cannabis sativa HOM05D002892 ORTHO05D003224 5.1e-21 106.3 234 34.2
CAN.G1155.2 Capsicum annuum HOM05D002892 ORTHO05D003224 5.1e-21 106.3 216 37.0
Ciclev10005278m.g Citrus clementina HOM05D002892 ORTHO05D003224 6.6e-21 105.9 213 37.6
FAN07G0904 Fragaria x ananassa HOM05D002892 ORTHO05D003224 6.6e-21 105.9 211 38.4
TAR362G0375 Trochodendron aralioides HOM05D002892 ORTHO05D003224 6.6e-21 105.9 215 38.1
Sp3g21420 Schrenkiella parvula HOM05D002892 ORTHO05D003224 8.6e-21 105.5 212 34.9
A01p31310 Brassica napus HOM05D002892 ORTHO05D003224 1.1e-20 105.1 218 34.4
C01p39920 Brassica napus HOM05D002892 ORTHO05D003224 1.1e-20 105.1 218 34.4
BolC1t03947H Brassica oleracea HOM05D002892 ORTHO05D003224 1.1e-20 105.1 218 34.4
Carub.0003s2401 Capsella rubella HOM05D002892 ORTHO05D003224 1.1e-20 105.1 212 36.3
Cc03_g09180 Coffea canephora HOM05D002892 ORTHO05D003224 1.5e-20 104.8 212 38.2
Manes.05G199300 Manihot esculenta HOM05D002892 ORTHO05D003224 1.5e-20 104.8 218 36.2
PGSC0003DMG400021879 Solanum tuberosum HOM05D002892 ORTHO05D003224 1.5e-20 104.8 213 36.6
AL3G38580 Arabidopsis lyrata HOM05D002892 ORTHO05D003224 1.9e-20 104.4 218 35.3
AT3G23710 Arabidopsis thaliana HOM05D002892 ORTHO05D003224 1.9e-20 104.4 218 35.3
EL10Ac3g07434 Beta vulgaris HOM05D002892 ORTHO05D003224 1.9e-20 104.4 223 37.7
BraA01t03257Z Brassica rapa HOM05D002892 ORTHO05D003224 1.9e-20 104.4 218 33.9
MD04G1021300 Malus domestica HOM05D002892 ORTHO05D003224 1.9e-20 104.4 212 36.8
Glyma.05G150300 Glycine max HOM05D002892 ORTHO05D003224 2.5e-20 104.0 209 36.4
Lj4g0007099 Lotus japonicus HOM05D002892 ORTHO05D003224 2.5e-20 104.0 212 36.8
Sed0019564 Sechium edule HOM05D002892 ORTHO05D003224 3.3e-20 103.6 210 34.3
RcHm_v2.0_Chr4g0412551 Rosa chinensis HOM05D002892 ORTHO05D003224 4.3e-20 103.2 213 38.0
Oeu034313.2 Olea europaea HOM05D002892 ORTHO05D003224 7.3e-20 102.4 240 35.0
Rhsim02G0068800 Rhododendron simsii HOM05D002892 ORTHO05D003224 7.3e-20 102.4 213 35.2
Atru.chr3.1780 Acer truncatum HOM05D002892 ORTHO05D003224 1.2e-19 101.7 228 35.1
MBI07_g02622_MAGBIO Magnolia biondii HOM05D002892 ORTHO05D003224 1.2e-19 101.7 207 36.2
BcaB04g20426 Brassica carinata HOM05D002892 ORTHO05D003224 2.8e-19 100.5 212 34.9
PGR142G0163 Punica granatum HOM05D002892 ORTHO05D003224 3.6e-19 100.1 212 34.9
Aa31LG8G10260 Aethionema arabicum HOM05D002892 ORTHO05D003224 1.1e-18 98.6 213 33.8
DCAR_021439 Daucus carota HOM05D002892 ORTHO05D003224 1.1e-18 98.6 215 35.3
ATR0561G132 Amborella trichopoda HOM05D002892 ORTHO05D003224 1.8e-18 97.8 215 34.4
Thhalv10002616m.g Eutrema salsugineum HOM05D002892 ORTHO05D003224 3.1e-18 97.1 216 33.3
Ah.13g077800 Amaranthus hybridus HOM05D002892 ORTHO05D003224 4.0e-18 96.7 216 36.6
THA.LOC104808679 Tarenaya hassleriana HOM05D002892 ORTHO05D003224 6.9e-18 95.9 207 33.8
Phvul.003G291300 Phaseolus vulgaris HOM05D002892 ORTHO05D003224 1.2e-17 95.1 207 35.3
Pp3c6_7780 Physcomitrium patens HOM05D002892 ORTHO05D003224 1.2e-17 95.1 217 33.6
SGA_v2.0_scaffold17G08007 Striga asiatica HOM05D002892 ORTHO05D003224 1.2e-17 95.1 217 35.5
SalBow2G0061 Salvia bowleyana HOM05D002892 ORTHO05D003224 2.0e-17 94.4 207 34.3
TWI53G0024 Tripterygium wilfordii HOM05D002892 ORTHO05D003224 2.6e-17 94.0 215 36.3
Glyma.08G107200 Glycine max HOM05D002892 ORTHO05D003224 3.4e-17 93.6 120 45.8
HanXRQChr14g0436511 Helianthus annuus HOM05D002892 ORTHO05D003224 5.8e-17 92.8 190 37.4
Peaxi162Scf00286g01040 Petunia axillaris HOM05D002892 ORTHO05D003224 9.9e-17 92.0 219 34.2
arahy.Tifrunner.gnm1.ann1.IRX0L3 Arachis hypogaea HOM05D002892 ORTHO05D003224 1.3e-16 91.7 255 31.8
Mapoly0066s0055 Marchantia polymorpha HOM05D002892 ORTHO05D003224 1.3e-16 91.7 216 32.9
Lsat_1_v5_gn_2_47761 Lactuca sativa HOM05D002892 ORTHO05D003224 8.4e-16 89.0 209 33.5
Duzib151G0859 Durio zibethinus HOM05D002892 ORTHO05D003224 1.1e-15 88.6 219 33.8
GSVIVG01031575001 Vitis vinifera HOM05D002892 ORTHO05D003224 1.4e-15 88.2 120 41.7
Zm00001eb305250 Zea mays HOM05D002892 ORTHO05D003224 1.9e-15 87.8 230 32.6
CBR_g39650 Chara braunii HOM05D002892 ORTHO05D003224 2.4e-15 87.4 219 30.6
QL06p027085 Quercus lobata HOM05D002892 ORTHO05D003224 2.4e-15 87.4 278 28.1
Migut.N03126 Erythranthe guttata HOM05D002892 ORTHO05D003224 5.4e-15 86.3 137 41.6
FAN12G3534 Fragaria x ananassa HOM05D002892 ORTHO05D003224 1.2e-14 85.1 211 33.6
Os07g0290800 Oryza sativa ssp. japonica HOM05D002892 ORTHO05D003224 1.2e-14 85.1 233 30.0
Prupe.1G170300 Prunus persica HOM05D002892 ORTHO05D003224 1.6e-14 84.7 191 36.1
Migut.N03125 Erythranthe guttata HOM05D002892 ORTHO05D003224 3.9e-13 80.1 215 32.6
Dinv32165 Davidia involucrata HOM05D002892 ORTHO05D003224 1.3e-11 75.1 161 36.0
HPP92_013635 Vanilla planifolia HOM05D002892 ORTHO05D003224 2.1e-11 74.3 199 33.2
HPP92_013630 Vanilla planifolia HOM05D002892 ORTHO05D003224 2.8e-11 73.9 204 32.8
vmacro15589 Vaccinium macrocarpon HOM05D002892 ORTHO05D003224 3.6e-11 73.6 137 35.0
SGA_v2.0_scaffold43G16362 Striga asiatica HOM05D002892 ORTHO05D003224 4.8e-11 73.2 218 29.4
Nn1g08127 Nelumbo nucifera HOM05D002892 ORTHO05D003224 1.8e-10 71.2 215 32.1
AUR62018534 Chenopodium quinoa HOM05D002892 ORTHO05D003224 5.3e-10 69.7 217 31.8
Migut.N03124 Erythranthe guttata HOM05D002892 ORTHO05D003224 1.2e-09 68.6 207 26.6
Atru.chr13.686 Acer truncatum HOM05D002892 ORTHO05D003224 2.0e-09 67.8 120 35.8
Migut.N03129 Erythranthe guttata HOM05D002892 ORTHO05D003224 2.6e-09 67.4 237 27.0
CDE09G1133 Ceratophyllum demersum HOM05D002892 ORTHO05D003224 4.5e-09 66.6 192 32.3
CDE04G3524 Ceratophyllum demersum HOM05D002892 ORTHO05D003224 7.6e-09 65.9 218 26.6
Peaxi162Scf00252g00918 Petunia axillaris HOM05D002892 ORTHO05D003224 9.9e-09 65.5 219 27.9
Migut.N03128 Erythranthe guttata HOM05D002892 ORTHO05D003224 1.7e-08 64.7 119 34.5
Pp3c16_18870 Physcomitrium patens HOM05D002892 ORTHO05D003224 1.7e-08 64.7 189 28.6
QL02p004922 Quercus lobata HOM05D002892 ORTHO05D003224 2.2e-08 64.3 209 27.8
QL02p005020 Quercus lobata HOM05D002892 ORTHO05D003224 2.2e-08 64.3 209 27.8
Sc25g0005750 Simmondsia chinensis HOM05D002892 ORTHO05D003224 2.9e-08 63.9 121 38.0
AUR62020883 Chenopodium quinoa HOM05D002892 ORTHO05D003224 8.4e-08 62.4 215 30.2
Oeu048565.1 Olea europaea HOM05D000691 ORTHO05D000378 1.1e-07 62.0 75 49.3
Eucgr.F02353 Eucalyptus grandis HOM05D002892 ORTHO05D003224 2.4e-07 60.8 124 33.9
Cre14.g625750 Chlamydomonas reinhardtii HOM05D002892 ORTHO05D003224 3.2e-07 60.5 140 32.9
CSS0027640 Camellia sinensis var. sinensis HOM05D002892 ORTHO05D003224 5.4e-07 59.7 121 33.1
Oeu032737.1 Olea europaea HOM05D000691 ORTHO05D000378 5.4e-07 59.7 73 49.3
Oeu049268.1 Olea europaea HOM05D000691 ORTHO05D000378 5.4e-07 59.7 74 48.6
Oeu023578.1 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-06 58.5 73 49.3
Oeu027794.2 Olea europaea HOM05D000691 ORTHO05D000378 2.1e-06 57.8 75 48.0
ClCG08G003650 Citrullus lanatus HOM05D002892 ORTHO05D003224 3.5e-06 57.0 126 34.1
VMungo0251G1691 Vigna mungo HOM05D002892 ORTHO05D003224 3.5e-06 57.0 83 42.2
Sopen02g010000 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-06 55.8 115 35.7


User provided reference genes

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