Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 3.3e-80 301.6 148 100.0
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 4.1e-14 82.0 48 91.7
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 6.6e-12 74.7 70 61.4
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 1.9e-11 73.2 70 60.0
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 9.5e-11 70.9 70 60.0
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 1.2e-10 70.5 91 50.5
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 1.6e-10 70.1 68 58.8
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 1.6e-10 70.1 57 66.7
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 2.1e-10 69.7 62 64.5
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 2.8e-10 69.3 91 46.2
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 2.8e-10 69.3 85 52.9
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 3.6e-10 68.9 62 62.9
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 3.6e-10 68.9 62 62.9
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 3.6e-10 68.9 47 78.7
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 6.2e-10 68.2 57 64.9
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.1e-09 67.4 57 66.7
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 2.4e-09 66.2 66 60.6
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 2.4e-09 66.2 61 62.3
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 3.1e-09 65.9 62 61.3
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 4.0e-09 65.5 63 60.3
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 4.0e-09 65.5 61 62.3
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 5.2e-09 65.1 101 39.6
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 6.8e-09 64.7 57 59.6
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 8.9e-09 64.3 70 54.3
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 8.9e-09 64.3 61 59.0
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 1.2e-08 63.9 60 60.0
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.2e-08 63.9 52 59.6
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.2e-08 63.9 52 59.6
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 1.2e-08 63.9 54 64.8
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 2.0e-08 63.2 63 57.1
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 2.0e-08 63.2 63 58.7
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 2.6e-08 62.8 63 57.1
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 2.6e-08 62.8 54 63.0
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 3.4e-08 62.4 77 48.1
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 3.4e-08 62.4 62 56.5
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 5.8e-08 61.6 68 50.0
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 5.8e-08 61.6 68 50.0
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 5.8e-08 61.6 68 50.0
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 5.8e-08 61.6 68 50.0
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 7.6e-08 61.2 51 60.8
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 9.9e-08 60.8 55 58.2
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 9.9e-08 60.8 68 50.0
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 9.9e-08 60.8 68 50.0
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 9.9e-08 60.8 68 50.0
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 1.3e-07 60.5 68 47.1
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 1.3e-07 60.5 70 48.6
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 1.3e-07 60.5 78 48.7
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.3e-07 60.5 56 60.7
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 1.3e-07 60.5 68 48.5
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 1.7e-07 60.1 68 50.0
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.7e-07 60.1 68 48.5
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 1.7e-07 60.1 63 55.6
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 1.7e-07 60.1 63 55.6
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 2.2e-07 59.7 53 56.6
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 2.2e-07 59.7 89 42.7
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 2.9e-07 59.3 70 50.0
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 2.9e-07 59.3 63 55.6
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 3.8e-07 58.9 62 51.6
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 3.8e-07 58.9 55 61.8
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 4.9e-07 58.5 61 54.1
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 4.9e-07 58.5 61 54.1
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 4.9e-07 58.5 78 44.9
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 6.4e-07 58.2 78 44.9
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 8.4e-07 57.8 61 54.1
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 8.4e-07 57.8 54 57.4
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 1.4e-06 57.0 72 44.4
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 1.9e-06 56.6 61 47.5
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.4e-06 56.2 61 52.5
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 2.4e-06 56.2 78 42.3
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 2.4e-06 56.2 54 51.9
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 3.2e-06 55.8 82 41.5
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 3.2e-06 55.8 85 43.5
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 3.2e-06 55.8 68 47.1
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 3.2e-06 55.8 68 47.1
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 4.2e-06 55.5 52 57.7
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 4.2e-06 55.5 58 55.2
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 4.2e-06 55.5 68 47.1
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 4.2e-06 55.5 76 44.7
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 5.4e-06 55.1 97 40.2
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 5.4e-06 55.1 61 47.5
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 7.1e-06 54.7 58 53.4
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 7.1e-06 54.7 55 54.5
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 7.1e-06 54.7 55 52.7
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 9.2e-06 54.3 63 50.8


User provided reference genes

Program Settings