Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 1.0e-229 799.7 397 100.0
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 7.7e-148 527.7 431 67.3
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 7.6e-71 271.9 405 47.2
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 9.3e-69 265.0 446 42.8
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.9e-62 242.7 415 41.9
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 4.9e-62 242.7 354 45.2
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.5e-58 231.1 423 41.1
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 4.8e-57 226.1 416 40.1
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 4.9e-54 216.1 415 36.4
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 5.4e-53 212.6 416 39.9
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.7e-52 210.3 416 37.3
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.8e-51 207.6 412 40.3
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.6e-49 201.1 443 34.8
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 2.9e-46 190.3 431 37.6
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 4.9e-46 189.5 220 51.8
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.1e-42 178.3 381 38.1
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 5.7e-42 176.0 391 39.6
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 2.1e-41 174.1 397 39.0
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 2.1e-41 174.1 433 37.2
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.8e-41 173.7 430 36.3
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 3.7e-41 173.3 292 42.8
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 8.2e-41 172.2 386 35.8
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 5.3e-40 169.5 421 36.6
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.5e-39 167.9 428 36.2
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.0e-39 167.5 445 36.6
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 1.0e-38 165.2 453 36.4
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.3e-38 164.9 379 36.9
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 2.2e-38 164.1 395 38.5
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.2e-37 159.8 450 35.1
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 4.2e-37 159.8 353 37.7
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.5e-37 159.5 449 35.4
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 5.5e-37 159.5 424 35.8
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 7.1e-37 159.1 417 36.0
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 1.2e-36 158.3 400 35.8
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.6e-36 157.9 454 35.2
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 3.5e-36 156.8 443 35.9
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.8e-35 154.5 423 31.4
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 2.3e-35 154.1 424 35.4
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 3.0e-35 153.7 225 45.3
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 3.0e-35 153.7 415 33.7
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 1.5e-34 151.4 431 34.1
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.3e-34 149.8 406 34.5
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 4.3e-34 149.8 423 33.1
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 7.4e-34 149.1 429 36.1
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 9.7e-34 148.7 409 35.5
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 9.7e-34 148.7 420 32.9
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.3e-33 148.3 421 35.6
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.6e-33 147.9 430 33.3
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 6.3e-33 146.0 418 35.2
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 1.4e-32 144.8 406 34.0
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 1.4e-32 144.8 401 34.4
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.8e-32 144.4 420 35.2
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 4.1e-32 143.3 381 37.0
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 6.9e-32 142.5 225 44.0
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 5.9e-31 139.4 398 35.7
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 1.7e-30 137.9 442 31.4
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 2.2e-30 137.5 397 36.5
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 3.8e-30 136.7 421 32.3
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 6.5e-30 136.0 443 32.1
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 3.2e-29 133.7 436 33.7
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 3.2e-29 133.7 351 36.8
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 5.5e-29 132.9 444 34.5
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 5.5e-29 132.9 415 30.1
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.1e-28 131.0 396 36.6
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.8e-27 127.9 436 33.0
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.3e-27 127.5 384 34.9
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 2.3e-27 127.5 423 31.4
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 5.7e-26 122.9 433 32.6
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 7.4e-26 122.5 371 31.8
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 7.4e-26 122.5 398 33.7
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 7.4e-26 122.5 398 33.7
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 7.4e-26 122.5 379 34.0
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 1.7e-25 121.3 261 33.3
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.8e-25 120.6 404 31.2
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 8.2e-25 119.0 432 33.3
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 1.2e-23 115.2 389 30.6
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 1.2e-23 115.2 433 31.9
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 1.2e-23 115.2 391 31.5
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 2.0e-23 114.4 439 29.6
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 3.4e-23 113.6 401 32.7
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.0e-22 112.1 427 31.6
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 1.7e-22 111.3 413 29.8
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 1.7e-22 111.3 414 30.4
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.2e-22 110.9 438 32.2
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 3.8e-22 110.2 398 28.4
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 3.8e-22 110.2 438 31.7
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 8.5e-22 109.0 415 31.1
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 1.1e-21 108.6 442 30.5
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 1.9e-21 107.8 418 29.4
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 3.2e-21 107.1 429 31.7
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.2e-21 107.1 398 30.7
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.6e-20 104.8 368 31.2
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 2.1e-20 104.4 105 55.2
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 2.7e-20 104.0 419 32.9
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 4.7e-20 103.2 443 29.8
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 7.9e-20 102.4 439 31.9
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 7.9e-20 102.4 411 30.2
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 1.4e-19 101.7 219 32.9
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 2.3e-19 100.9 431 30.6
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 8.8e-19 99.0 294 32.3
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.0e-18 97.8 389 29.6
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 5.7e-18 96.3 379 28.8
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 5.7e-18 96.3 402 30.3
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.7e-17 94.7 432 29.2
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 8.2e-17 92.4 433 30.5
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.8e-16 91.3 430 29.3
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.0e-14 85.5 183 36.6
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 1.1e-13 82.0 204 34.8
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 1.5e-13 81.6 406 29.3
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 3.2e-13 80.5 440 30.5
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 7.2e-13 79.3 345 29.9
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 6.1e-12 76.3 234 34.6
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.0e-11 73.6 252 32.5
PGSC0003DMG400044967 Solanum tuberosum HOM05D016660 ORTHO05D006345 4.0e-11 73.6 362 26.8
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 6.7e-11 72.8 373 26.5
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 6.7e-11 72.8 181 34.8
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 8.8e-11 72.4 430 27.9
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 1.5e-10 71.6 409 29.3
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 2.6e-10 70.9 216 34.3
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 4.4e-10 70.1 264 28.4
SGA_v2.0_scaffold130G34335 Striga asiatica HOM05D006105 ORTHO05D006345 9.7e-10 68.9 179 31.3
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 2.2e-09 67.8 438 27.9
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.8e-09 66.6 256 33.2
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 4.8e-09 66.6 217 31.8
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 8.2e-09 65.9 270 34.1
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.1e-08 65.5 439 29.2
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 3.1e-08 63.9 394 28.4
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 7.0e-08 62.8 353 26.6
GSVIVG01021165001 Vitis vinifera HOM05D006105 ORTHO05D006345 1.6e-07 61.6 395 26.8
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 2.6e-07 60.8 273 30.4
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 3.5e-07 60.5 271 29.5
Sopen10g003360 Solanum pennellii HOM05D016660 ORTHO05D006345 5.9e-07 59.7 362 25.7
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 7.7e-07 59.3 449 25.4
Sopen10g003370 Solanum pennellii HOM05D016660 ORTHO05D006345 7.7e-07 59.3 360 26.1
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 3.8e-06 57.0 230 32.6


User provided reference genes

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