Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 2.2e-31 138.3 67 100.0
Cc05_g11020 Coffea canephora HOM05D008148 ORTHO05D010295 3.6e-18 94.4 66 69.7
SalBow6G6640 Salvia bowleyana HOM05D008148 ORTHO05D010295 5.3e-17 90.5 66 65.2
SGA_v2.0_scaffold34G13787 Striga asiatica HOM05D008148 ORTHO05D010295 1.2e-16 89.4 52 76.9
SalBow7G3203 Salvia bowleyana HOM05D008148 ORTHO05D010295 2.0e-16 88.6 66 63.6
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 1.2e-13 79.3 59 67.8
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 1.5e-11 72.4 65 58.5
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 4.3e-11 70.9 65 56.9
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 9.6e-11 69.7 58 60.3
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 1.3e-10 69.3 68 55.9
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 2.1e-10 68.6 46 73.9
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 3.7e-10 67.8 61 55.7
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 4.8e-10 67.4 46 71.7
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 4.8e-10 67.4 67 52.2
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 4.8e-10 67.4 40 70.0
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 4.8e-10 67.4 62 61.3
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 1.1e-09 66.2 61 55.7
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 1.1e-09 66.2 61 55.7
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 2.4e-09 65.1 64 56.2
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 2.4e-09 65.1 67 52.2
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 4.0e-09 64.3 61 55.7
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 4.0e-09 64.3 57 54.4
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 5.3e-09 63.9 60 51.7
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 5.3e-09 63.9 54 57.4
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 9.0e-09 63.2 49 61.2
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 1.2e-08 62.8 38 73.7
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 1.5e-08 62.4 65 50.8
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 1.5e-08 62.4 61 54.1
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 3.4e-08 61.2 63 52.4
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 3.4e-08 61.2 61 50.8
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 5.8e-08 60.5 62 50.0
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 5.8e-08 60.5 61 54.1
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 5.8e-08 60.5 71 57.7
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 5.8e-08 60.5 60 51.7
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 5.8e-08 60.5 60 51.7
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 7.6e-08 60.1 58 51.7
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 1.0e-07 59.7 61 54.1
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 1.0e-07 59.7 60 50.0
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 1.3e-07 59.3 60 51.7
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 1.3e-07 59.3 60 50.0
Duzib213G0597 Durio zibethinus HOM05D008148 ORTHO05D010295 1.3e-07 59.3 57 52.6
Migut.H02001 Erythranthe guttata HOM05D008148 ORTHO05D010295 1.3e-07 59.3 46 58.7
ClCG11G017320 Citrullus lanatus HOM05D008148 ORTHO05D010295 1.7e-07 58.9 67 49.3
Sed0019666 Sechium edule HOM05D008148 ORTHO05D010295 1.7e-07 58.9 67 47.8
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 2.2e-07 58.5 60 51.7
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 2.2e-07 58.5 61 50.8
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 3.8e-07 57.8 41 65.9
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 6.5e-07 57.0 38 73.7
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 8.4e-07 56.6 60 51.7
unitig_85.g27419 Utricularia gibba HOM05D055015 ORTHO05D010295 8.4e-07 56.6 72 41.7
unitig_86.g29830 Utricularia gibba HOM05D055015 ORTHO05D010295 8.4e-07 56.6 72 41.7
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 1.1e-06 56.2 46 58.7
Thecc.07G117800 Theobroma cacao HOM05D008148 ORTHO05D010295 1.1e-06 56.2 65 47.7
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 1.4e-06 55.8 65 50.8
Nn1g04456 Nelumbo nucifera HOM05D008148 ORTHO05D010295 1.4e-06 55.8 41 63.4
Aqoxy4G00298 Aquilegia oxysepala HOM05D037719 ORTHO05D031273 1.9e-06 55.5 35 68.6
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 2.5e-06 55.1 45 55.6
Gohir.A01G053800 Gossypium hirsutum HOM05D008148 ORTHO05D010295 5.5e-06 53.9 65 46.2
Gohir.D01G042712 Gossypium hirsutum HOM05D008148 ORTHO05D010295 7.1e-06 53.5 65 46.2
Gorai.002G054100 Gossypium raimondii HOM05D008148 ORTHO05D010295 7.1e-06 53.5 65 46.2
MBI06_g08612_MAGBIO Magnolia biondii HOM05D008148 ORTHO05D010295 7.1e-06 53.5 38 63.2
Phvul.005G081700 Phaseolus vulgaris HOM05D008148 ORTHO05D010295 9.3e-06 53.1 34 58.8


User provided reference genes

Program Settings