Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059236.1 Olea europaea HOM05D000950 ORTHO05D000774 6.8e-56 220.3 104 100.0
Oeu038683.1 Olea europaea HOM05D000950 ORTHO05D000774 6.1e-20 100.9 76 67.1
Migut.N01418 Erythranthe guttata HOM05D000950 ORTHO05D000774 3.2e-13 78.6 76 52.6
vmacro13333 Vaccinium macrocarpon HOM05D000950 ORTHO05D000774 2.7e-12 75.5 76 48.7
Actinidia38294 Actinidia chinensis HOM05D000950 ORTHO05D000774 4.6e-12 74.7 76 46.1
Actinidia32925 Actinidia chinensis HOM05D002353 ORTHO05D002461 6.1e-12 74.3 76 47.4
Migut.B01699 Erythranthe guttata HOM05D000950 ORTHO05D000774 6.1e-12 74.3 76 48.7
Migut.O00842 Erythranthe guttata HOM05D000950 ORTHO05D000774 6.1e-12 74.3 76 48.7
Rhsim07G0020600 Rhododendron simsii HOM05D000950 ORTHO05D000774 1.4e-11 73.2 76 47.4
MSTRG.4875 Avicennia marina HOM05D000950 ORTHO05D000774 1.8e-11 72.8 76 50.0
Glyma.03G017000 Glycine max HOM05D000950 ORTHO05D000774 5.1e-11 71.2 77 49.4
TAR374G1190 Trochodendron aralioides HOM05D000950 ORTHO05D000774 5.1e-11 71.2 76 46.1
Potri.014G075800 Populus trichocarpa HOM05D000950 ORTHO05D000774 6.7e-11 70.9 77 44.2
MSTRG.28205 Avicennia marina HOM05D000950 ORTHO05D000774 8.8e-11 70.5 76 48.7
Glyma.07G077600 Glycine max HOM05D000950 ORTHO05D000774 8.8e-11 70.5 77 48.1
PGR031G0932 Punica granatum HOM05D000950 ORTHO05D000774 1.1e-10 70.1 83 47.0
Cpa.g.sc18.222 Carica papaya HOM05D000950 ORTHO05D000774 1.5e-10 69.7 77 44.2
SGA_v2.0_scaffold95G28866 Striga asiatica HOM05D000950 ORTHO05D000774 2.0e-10 69.3 76 46.1
Phvul.010G091000 Phaseolus vulgaris HOM05D000950 ORTHO05D000774 3.3e-10 68.6 77 48.1
CSS0001096 Camellia sinensis var. sinensis HOM05D000950 ORTHO05D000774 7.4e-10 67.4 76 43.4
Sabra14G0056100 Salix brachista HOM05D000950 ORTHO05D000774 9.7e-10 67.0 77 41.6
Nn1g01372 Nelumbo nucifera HOM05D000950 ORTHO05D000774 1.7e-09 66.2 76 39.5
unitig_0.g1283 Utricularia gibba HOM05D000950 ORTHO05D000774 1.7e-09 66.2 76 43.4
CiPaw.02G025500 Carya illinoinensis HOM05D000950 ORTHO05D000774 2.2e-09 65.9 77 46.8
Medtr0002s0020 Medicago truncatula HOM05D000950 ORTHO05D000774 2.2e-09 65.9 82 42.7
Duzib138G1404 Durio zibethinus HOM05D000950 ORTHO05D000774 2.8e-09 65.5 76 46.1
Gohir.A11G085400 Gossypium hirsutum HOM05D000950 ORTHO05D000774 2.8e-09 65.5 76 46.1
RcHm_v2.0_Chr7g0199151 Rosa chinensis HOM05D000950 ORTHO05D000774 3.7e-09 65.1 75 41.3
GSVIVG01019854001 Vitis vinifera HOM05D000950 ORTHO05D000774 3.7e-09 65.1 76 43.4
VMungo0331G0801 Vigna mungo HOM05D000950 ORTHO05D000774 6.3e-09 64.3 77 45.5
Aqoxy7G00435 Aquilegia oxysepala HOM05D000950 ORTHO05D000774 8.2e-09 63.9 77 41.6
Psat4g151360 Pisum sativum HOM05D000950 ORTHO05D000774 1.1e-08 63.5 81 42.0
TAR629G1586 Trochodendron aralioides HOM05D000950 ORTHO05D000774 1.1e-08 63.5 109 38.5
arahy.Tifrunner.gnm1.ann1.KEZ9JE Arachis hypogaea HOM05D000950 ORTHO05D000774 1.4e-08 63.2 82 42.7
arahy.Tifrunner.gnm1.ann1.SIWW3U Arachis hypogaea HOM05D000950 ORTHO05D000774 1.4e-08 63.2 82 42.7
Manes.01G261700 Manihot esculenta HOM05D000950 ORTHO05D000774 1.4e-08 63.2 78 41.0
Nitab4.5_0000134g0170 Nicotiana tabacum HOM05D000950 ORTHO05D000774 1.4e-08 63.2 80 43.8
Prupe.5G091600 Prunus persica HOM05D000950 ORTHO05D000774 1.4e-08 63.2 75 41.3
TAR375G0645 Trochodendron aralioides HOM05D000950 ORTHO05D000774 1.4e-08 63.2 76 40.8
TAR375G0978 Trochodendron aralioides HOM05D000950 ORTHO05D000774 1.4e-08 63.2 76 40.8
FAN08G1608 Fragaria x ananassa HOM05D000950 ORTHO05D000774 1.8e-08 62.8 75 40.0
MD04G1066900 Malus domestica HOM05D000950 ORTHO05D000774 1.8e-08 62.8 75 41.3
MD06G1073200 Malus domestica HOM05D000950 ORTHO05D000774 1.8e-08 62.8 75 40.0
Peaxi162Scf00233g00044 Petunia axillaris HOM05D000950 ORTHO05D000774 1.8e-08 62.8 76 44.7
Rhsim03G0177500 Rhododendron simsii HOM05D000950 ORTHO05D000774 1.8e-08 62.8 84 46.4
Haze_13749 Corylus avellana HOM05D000950 ORTHO05D000774 2.4e-08 62.4 73 42.5
Medtr1g101390 Medicago truncatula HOM05D000950 ORTHO05D000774 2.4e-08 62.4 88 38.6
Nitab4.5_0004550g0110 Nicotiana tabacum HOM05D000950 ORTHO05D000774 2.4e-08 62.4 76 44.7
GSVIVG01027514001 Vitis vinifera HOM05D000950 ORTHO05D000774 2.4e-08 62.4 78 43.6
CiPaw.01G054600 Carya illinoinensis HOM05D000950 ORTHO05D000774 3.1e-08 62.0 77 41.6
Gohir.D11G089600 Gossypium hirsutum HOM05D000950 ORTHO05D000774 3.1e-08 62.0 76 44.7
Gorai.007G095600 Gossypium raimondii HOM05D000950 ORTHO05D000774 3.1e-08 62.0 76 44.7
Manes.01G066600 Manihot esculenta HOM05D000950 ORTHO05D000774 3.1e-08 62.0 77 42.9
Ca_23748_v3 Cicer arietinum L. HOM05D000950 ORTHO05D000774 4.1e-08 61.6 80 42.5
FvH4_5g01540 Fragaria vesca HOM05D000950 ORTHO05D000774 4.1e-08 61.6 75 40.0
FAN04G0533 Fragaria x ananassa HOM05D000950 ORTHO05D000774 4.1e-08 61.6 75 40.0
FAN13G0639 Fragaria x ananassa HOM05D000950 ORTHO05D000774 4.1e-08 61.6 75 40.0
FAN18G3585 Fragaria x ananassa HOM05D000950 ORTHO05D000774 4.1e-08 61.6 75 40.0
Lalb_Chr17g0340001 Lupinus albus HOM05D000950 ORTHO05D000774 4.1e-08 61.6 79 40.5
Thecc.01G367500 Theobroma cacao HOM05D000950 ORTHO05D000774 4.1e-08 61.6 76 43.4
Thecc.03G171200 Theobroma cacao HOM05D000950 ORTHO05D000774 4.1e-08 61.6 73 39.7
Manes.06G144300 Manihot esculenta HOM05D000950 ORTHO05D000774 5.3e-08 61.2 73 41.1
Nitab4.5_0000258g0320 Nicotiana tabacum HOM05D000950 ORTHO05D000774 5.3e-08 61.2 75 41.3
Dinv43763 Davidia involucrata HOM05D000950 ORTHO05D000774 6.9e-08 60.8 77 41.6
Eucgr.D02244 Eucalyptus grandis HOM05D000950 ORTHO05D000774 6.9e-08 60.8 77 41.6
THA.LOC104802012 Tarenaya hassleriana HOM05D000950 ORTHO05D000774 6.9e-08 60.8 77 44.2
Cc02_g37320 Coffea canephora HOM05D000950 ORTHO05D000774 9.1e-08 60.5 77 41.6
DCAR_006759 Daucus carota HOM05D000950 ORTHO05D000774 9.1e-08 60.5 76 42.1
Duzib205G1006 Durio zibethinus HOM05D000950 ORTHO05D000774 9.1e-08 60.5 73 38.4
Rhsim09G0196700 Rhododendron simsii HOM05D000950 ORTHO05D000774 9.1e-08 60.5 76 39.5
Dinv35183 Davidia involucrata HOM05D000950 ORTHO05D000774 1.2e-07 60.1 76 43.4
Gohir.D12G107400 Gossypium hirsutum HOM05D000950 ORTHO05D000774 1.2e-07 60.1 78 41.0
SalBow5G0074 Salvia bowleyana HOM05D000950 ORTHO05D000774 1.2e-07 60.1 76 44.7
SalBow5G4985 Salvia bowleyana HOM05D000950 ORTHO05D000774 1.2e-07 60.1 76 44.7
CiPaw.04G067000 Carya illinoinensis HOM05D000950 ORTHO05D000774 1.5e-07 59.7 76 40.8
COL.COLO4_14269 Corchorus olitorius HOM05D000950 ORTHO05D000774 1.5e-07 59.7 73 41.1
CsaV3_3G009250 Cucumis sativus L. HOM05D000950 ORTHO05D000774 1.5e-07 59.7 81 37.0
unitig_22.g5361 Utricularia gibba HOM05D003871 ORTHO05D004621 1.5e-07 59.7 76 36.8
Actinidia03107 Actinidia chinensis HOM05D000950 ORTHO05D000774 2.0e-07 59.3 76 42.1
CDE11G1257 Ceratophyllum demersum HOM05D000950 ORTHO05D000774 2.0e-07 59.3 78 37.2
Duzib084G0147 Durio zibethinus HOM05D000950 ORTHO05D000774 2.0e-07 59.3 73 39.7
Nitab4.5_0002080g0050 Nicotiana tabacum HOM05D000950 ORTHO05D000774 2.0e-07 59.3 76 40.8
Prupe.2G290600 Prunus persica HOM05D000950 ORTHO05D000774 2.0e-07 59.3 73 41.1
QL09p014909 Quercus lobata HOM05D000950 ORTHO05D000774 2.0e-07 59.3 73 39.7
Actinidia31808 Actinidia chinensis HOM05D000950 ORTHO05D000774 2.6e-07 58.9 76 42.1
Ah.05g176110 Amaranthus hybridus HOM05D000950 ORTHO05D000774 2.6e-07 58.9 91 38.5
FAN10G3988 Fragaria x ananassa HOM05D000950 ORTHO05D000774 2.6e-07 58.9 78 41.0
Glyma.10G238700 Glycine max HOM05D000950 ORTHO05D000774 2.6e-07 58.9 84 39.3
Glyma.20G155700 Glycine max HOM05D000950 ORTHO05D000774 2.6e-07 58.9 84 39.3
Gohir.A12G104000 Gossypium hirsutum HOM05D000950 ORTHO05D000774 2.6e-07 58.9 78 39.7
Gohir.D05G283600 Gossypium hirsutum HOM05D000950 ORTHO05D000774 2.6e-07 58.9 76 38.2
Gohir.D05G283901 Gossypium hirsutum HOM05D000950 ORTHO05D000774 2.6e-07 58.9 76 38.2
Gorai.009G298100 Gossypium raimondii HOM05D000950 ORTHO05D000774 2.6e-07 58.9 80 40.0
Potri.015G138600 Populus trichocarpa HOM05D000950 ORTHO05D000774 2.6e-07 58.9 73 39.7
QL08p050478 Quercus lobata HOM05D000950 ORTHO05D000774 2.6e-07 58.9 77 40.3
THA.LOC104817271 Tarenaya hassleriana HOM05D000950 ORTHO05D000774 2.6e-07 58.9 77 41.6
Gorai.008G117000 Gossypium raimondii HOM05D000950 ORTHO05D000774 3.4e-07 58.5 78 41.0
Lsat_1_v5_gn_7_5801 Lactuca sativa HOM05D000950 ORTHO05D000774 3.4e-07 58.5 76 40.8
Lalb_Chr06g0161021 Lupinus albus HOM05D000950 ORTHO05D000774 3.4e-07 58.5 74 41.9
Sabra15G0149700 Salix brachista HOM05D000950 ORTHO05D000774 3.4e-07 58.5 73 38.4
unitig_22.g6716 Utricularia gibba HOM05D000950 ORTHO05D000774 3.4e-07 58.5 78 42.3
vmacro09854 Vaccinium macrocarpon HOM05D000950 ORTHO05D000774 3.4e-07 58.5 76 38.2
CiPaw.03G103000 Carya illinoinensis HOM05D000950 ORTHO05D000774 4.5e-07 58.2 73 39.7
Ciclev10021409m.g Citrus clementina HOM05D000950 ORTHO05D000774 4.5e-07 58.2 81 39.5
COL.COLO4_12617 Corchorus olitorius HOM05D000950 ORTHO05D000774 4.5e-07 58.2 76 40.8
FAN03G2209 Fragaria x ananassa HOM05D000950 ORTHO05D000774 4.5e-07 58.2 78 41.0
Potri.012G136200 Populus trichocarpa HOM05D000950 ORTHO05D000774 4.5e-07 58.2 76 36.8
CANSAT21G0846 Cannabis sativa HOM05D000950 ORTHO05D000774 5.9e-07 57.8 76 36.8
Sabra12G0102400 Salix brachista HOM05D000950 ORTHO05D000774 5.9e-07 57.8 76 36.8
Ciclev10021489m.g Citrus clementina HOM05D000950 ORTHO05D000774 7.7e-07 57.4 76 39.5
DCAR_025165 Daucus carota HOM05D000950 ORTHO05D000774 7.7e-07 57.4 76 40.8
Nitab4.5_0001834g0010 Nicotiana tabacum HOM05D000950 ORTHO05D000774 7.7e-07 57.4 79 39.2
TWI39G0278 Tripterygium wilfordii HOM05D000950 ORTHO05D000774 7.7e-07 57.4 76 35.5
MELO3C006145.2 Cucumis melo HOM05D000950 ORTHO05D000774 1.0e-06 57.0 81 35.8
MD01G1050800 Malus domestica HOM05D000950 ORTHO05D000774 1.0e-06 57.0 78 41.0
PGR142G3582 Punica granatum HOM05D000950 ORTHO05D000774 1.0e-06 57.0 76 36.8
CANSAT21G1029 Cannabis sativa HOM05D000950 ORTHO05D000774 1.3e-06 56.6 76 32.9
Gohir.A05G282400 Gossypium hirsutum HOM05D000950 ORTHO05D000774 1.3e-06 56.6 76 36.8
Nitab4.5_0000140g0190 Nicotiana tabacum HOM05D000950 ORTHO05D000774 1.3e-06 56.6 80 38.8
Nitab4.5_0001559g0030 Nicotiana tabacum HOM05D000950 ORTHO05D000774 1.3e-06 56.6 78 38.5
Nitab4.5_0002234g0090 Nicotiana tabacum HOM05D000950 ORTHO05D000774 1.3e-06 56.6 76 40.8
Psat6g198760 Pisum sativum HOM05D000950 ORTHO05D000774 1.3e-06 56.6 79 39.2
vmacro06717 Vaccinium macrocarpon HOM05D000950 ORTHO05D000774 1.3e-06 56.6 77 42.9
CAN.G170.39 Capsicum annuum HOM05D000950 ORTHO05D000774 1.7e-06 56.2 76 39.5
CDE12G0237 Ceratophyllum demersum HOM05D000950 ORTHO05D000774 1.7e-06 56.2 76 43.4
ClCG05G001860 Citrullus lanatus HOM05D000950 ORTHO05D000774 1.7e-06 56.2 81 34.6
Cc08_g14040 Coffea canephora HOM05D000950 ORTHO05D000774 1.7e-06 56.2 84 38.1
Thhalv10006134m.g Eutrema salsugineum HOM05D000950 ORTHO05D000774 1.7e-06 56.2 77 39.0
Gohir.A12G260200 Gossypium hirsutum HOM05D000950 ORTHO05D000774 1.7e-06 56.2 73 35.6
Manes.02G027400 Manihot esculenta HOM05D000950 ORTHO05D000774 1.7e-06 56.2 77 40.3
PSO782G3409 Papaver somniferum HOM05D000950 ORTHO05D000774 1.7e-06 56.2 76 38.2
Prupe.2G156400 Prunus persica HOM05D000950 ORTHO05D000774 1.7e-06 56.2 78 41.0
Actinidia34084 Actinidia chinensis HOM05D000950 ORTHO05D000774 2.2e-06 55.8 75 40.0
LjContig00238g0014831 Lotus japonicus HOM05D000950 ORTHO05D000774 2.2e-06 55.8 84 36.9
Medtr0113s0040 Medicago truncatula HOM05D000950 ORTHO05D000774 2.2e-06 55.8 88 37.5
Nitab4.5_0002853g0100 Nicotiana tabacum HOM05D000950 ORTHO05D000774 2.2e-06 55.8 76 40.8
PSO478G5227 Papaver somniferum HOM05D000950 ORTHO05D000774 2.2e-06 55.8 76 38.2
Atru.chr5.411 Acer truncatum HOM05D000950 ORTHO05D000774 2.9e-06 55.5 84 39.3
Glyma.09G145700 Glycine max HOM05D000950 ORTHO05D000774 2.9e-06 55.5 69 42.0
Gohir.D12G261000 Gossypium hirsutum HOM05D000950 ORTHO05D000774 2.9e-06 55.5 73 35.6
Gorai.008G279800 Gossypium raimondii HOM05D000950 ORTHO05D000774 2.9e-06 55.5 73 35.6
Lsat_1_v5_gn_4_38100 Lactuca sativa HOM05D000950 ORTHO05D000774 2.9e-06 55.5 76 39.5
MD01G1197200 Malus domestica HOM05D000950 ORTHO05D000774 2.9e-06 55.5 73 39.7
QL12p017327 Quercus lobata HOM05D000950 ORTHO05D000774 2.9e-06 55.5 76 38.2
Solyc01g091700.4 Solanum lycopersicum HOM05D000950 ORTHO05D000774 2.9e-06 55.5 77 41.6
Sopen01g037470 Solanum pennellii HOM05D000950 ORTHO05D000774 2.9e-06 55.5 77 41.6
C04p31640 Brassica napus HOM05D000950 ORTHO05D000774 3.8e-06 55.1 79 40.5
BolC4t24711H Brassica oleracea HOM05D000950 ORTHO05D000774 3.8e-06 55.1 79 40.5
CSS0027978 Camellia sinensis var. sinensis HOM05D000950 ORTHO05D000774 3.8e-06 55.1 76 39.5
CiPaw.11G140800 Carya illinoinensis HOM05D000950 ORTHO05D000774 3.8e-06 55.1 76 39.5
Eucgr.K00229 Eucalyptus grandis HOM05D000950 ORTHO05D000774 3.8e-06 55.1 76 32.9
HanXRQChr07g0206861 Helianthus annuus HOM05D000950 ORTHO05D000774 3.8e-06 55.1 78 39.7
Nitab4.5_0002718g0050 Nicotiana tabacum HOM05D000950 ORTHO05D000774 3.8e-06 55.1 76 39.5
PGSC0003DMG400010258 Solanum tuberosum HOM05D000950 ORTHO05D000774 3.8e-06 55.1 76 39.5
Glyma.16G197800 Glycine max HOM05D000950 ORTHO05D000774 5.0e-06 54.7 76 39.5
Lj9A577G58 Lonicera japonica HOM05D000950 ORTHO05D000774 5.0e-06 54.7 77 41.6
VMungo0720G3069 Vigna mungo HOM05D000950 ORTHO05D000774 5.0e-06 54.7 88 37.5
Lj2g0026458 Lotus japonicus HOM05D000950 ORTHO05D000774 6.5e-06 54.3 74 40.5
MBI12_g29755_MAGBIO Magnolia biondii HOM05D000950 ORTHO05D000774 6.5e-06 54.3 76 38.2
PGSC0003DMG400027777 Solanum tuberosum HOM05D000950 ORTHO05D000774 6.5e-06 54.3 77 40.3
Cpa.g.sc74.82 Carica papaya HOM05D000950 ORTHO05D000774 8.5e-06 53.9 76 35.5
CiPaw.12G097800 Carya illinoinensis HOM05D000950 ORTHO05D000774 8.5e-06 53.9 76 38.2
CDE04G1663 Ceratophyllum demersum HOM05D000950 ORTHO05D000774 8.5e-06 53.9 76 42.1
FAN03G0008 Fragaria x ananassa HOM05D000950 ORTHO05D000774 8.5e-06 53.9 79 35.4
PGR042G3846 Punica granatum HOM05D000950 ORTHO05D000774 8.5e-06 53.9 76 34.2
RcHm_v2.0_Chr1g0352361 Rosa chinensis HOM05D000950 ORTHO05D000774 8.5e-06 53.9 78 38.5


User provided reference genes

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