Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 1.8e-193 679.1 355 100.0
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 7.0e-193 677.2 355 99.7
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 3.5e-120 435.6 335 74.3
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 5.1e-119 431.8 335 73.7
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 2.5e-57 226.9 458 41.5
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 4.1e-52 209.5 390 42.6
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 1.3e-50 204.5 405 41.2
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 3.6e-48 196.4 395 40.8
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 8.1e-48 195.3 435 39.3
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 2.0e-46 190.7 399 39.6
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.9e-45 186.8 439 37.4
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 1.1e-44 184.9 382 42.9
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 8.6e-42 175.3 404 37.9
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 9.5e-41 171.8 375 40.5
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 2.1e-40 170.6 395 37.0
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 2.0e-38 164.1 411 38.2
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 2.6e-38 163.7 417 37.2
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 9.9e-38 161.8 410 37.1
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 1.3e-37 161.4 414 36.2
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 2.1e-35 154.1 401 35.4
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 2.7e-35 153.7 451 33.0
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.7e-35 153.7 221 52.9
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 4.6e-35 152.9 398 36.7
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 5.1e-34 149.4 364 36.3
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 3.3e-33 146.7 400 36.0
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 7.3e-33 145.6 445 34.4
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 9.6e-33 145.2 428 34.8
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 1.1e-31 141.7 414 33.8
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.4e-31 141.4 423 35.0
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 2.4e-31 140.6 469 33.9
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 3.1e-31 140.2 433 34.9
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 3.1e-31 140.2 424 34.2
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 4.0e-31 139.8 486 32.1
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 8.9e-31 138.7 378 36.0
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 1.5e-30 137.9 441 34.7
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 1.5e-30 137.9 396 35.9
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.0e-30 137.5 440 33.9
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.6e-30 137.1 378 35.7
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 4.4e-30 136.3 477 28.9
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 7.6e-30 135.6 449 30.5
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 1.3e-29 134.8 342 35.7
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 2.2e-29 134.0 410 32.2
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 3.8e-29 133.3 437 31.6
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 1.1e-28 131.7 464 30.4
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 5.4e-28 129.4 459 31.4
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 7.1e-28 129.0 429 35.0
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 7.1e-28 129.0 375 34.1
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 9.3e-28 128.6 434 32.0
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 2.7e-27 127.1 420 31.2
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.7e-27 127.1 450 32.7
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 4.6e-27 126.3 369 35.5
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 6.0e-27 125.9 432 32.9
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.0e-26 125.2 490 31.6
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 3.0e-26 123.6 381 35.7
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 5.1e-26 122.9 378 33.9
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 5.1e-26 122.9 412 30.1
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 5.1e-26 122.9 462 30.7
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.9e-25 120.9 293 37.9
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 5.6e-25 119.4 410 30.5
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 1.3e-24 118.2 409 32.0
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.3e-24 118.2 278 38.1
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 6.2e-24 115.9 410 32.4
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 8.1e-24 115.5 464 29.5
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 8.1e-24 115.5 326 31.9
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 8.1e-24 115.5 454 29.7
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 1.4e-23 114.8 395 30.6
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 2.0e-22 110.9 384 31.5
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 4.4e-22 109.8 360 35.8
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 7.6e-22 109.0 437 31.8
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 1.3e-21 108.2 412 31.6
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 1.3e-21 108.2 411 31.1
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 1.3e-21 108.2 411 31.1
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 2.9e-21 107.1 396 29.5
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 3.8e-21 106.7 429 31.0
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 3.8e-21 106.7 363 32.8
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 8.4e-21 105.5 427 31.1
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 8.4e-21 105.5 444 29.5
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 2.4e-20 104.0 460 26.1
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 7.1e-20 102.4 272 37.1
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 7.1e-20 102.4 420 31.0
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 7.1e-20 102.4 317 33.4
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 9.3e-20 102.1 462 27.1
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 2.1e-19 100.9 467 27.2
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.7e-19 100.5 460 26.3
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.5e-19 100.1 463 25.9
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 3.5e-19 100.1 400 31.8
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 7.9e-19 99.0 343 35.9
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 1.3e-18 98.2 245 35.9
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 1.7e-18 97.8 426 29.6
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 2.3e-18 97.4 270 37.8
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.3e-18 97.4 479 28.0
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 3.9e-18 96.7 341 30.8
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 5.1e-18 96.3 433 30.5
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 6.6e-18 95.9 335 35.5
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 1.1e-17 95.1 443 29.8
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.5e-17 94.0 445 32.1
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 2.5e-17 94.0 435 29.0
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 2.5e-17 94.0 457 27.1
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 4.3e-17 93.2 340 33.5
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 4.3e-17 93.2 480 26.9
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 9.6e-17 92.0 432 29.9
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 9.6e-17 92.0 405 28.1
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.6e-16 91.3 366 30.1
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 1.6e-16 91.3 488 25.8
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 2.1e-16 90.9 401 28.4
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 8.1e-16 89.0 401 27.7
GSVIVG01019863001 Vitis vinifera HOM05D002977 ORTHO05D003225 8.1e-16 89.0 228 36.8
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 1.8e-15 87.8 337 32.6
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 3.1e-15 87.0 301 32.2
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 4.0e-15 86.7 427 28.6
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 5.3e-15 86.3 459 26.4
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 9.0e-15 85.5 449 26.1
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 1.2e-14 85.1 374 30.5
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 2.6e-14 84.0 389 29.3
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 2.6e-14 84.0 336 30.7
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 3.4e-14 83.6 342 30.1
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 4.5e-14 83.2 319 30.4
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 4.5e-14 83.2 479 26.9
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 9.9e-14 82.0 508 26.8
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 2.2e-13 80.9 475 26.7
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 2.9e-13 80.5 488 26.0
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 2.9e-13 80.5 351 29.1
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 3.8e-13 80.1 395 30.1
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 4.9e-13 79.7 293 28.3
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 4.9e-13 79.7 308 32.5
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 6.4e-13 79.3 136 44.1
Ah.16g108930 Amaranthus hybridus HOM05D002977 ORTHO05D003225 8.4e-13 79.0 365 27.7
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.1e-12 78.6 431 25.3
Ciclev10023936m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.4e-12 78.2 196 36.2
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 3.2e-12 77.0 474 25.7
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 3.2e-12 77.0 295 31.9
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 7.1e-12 75.9 461 25.8
Glyma.05G050000 Glycine max HOM05D002977 ORTHO05D003225 1.2e-11 75.1 295 33.2
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 1.6e-11 74.7 400 26.8
Ca_20242_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.1e-11 74.3 418 26.6
Ca_29496_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.1e-11 74.3 418 26.6
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 2.7e-11 73.9 268 35.1
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 2.7e-11 73.9 278 30.6
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 3.5e-11 73.6 319 30.7
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 4.6e-11 73.2 351 29.6
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 4.6e-11 73.2 461 24.9
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 6.0e-11 72.8 447 26.0
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 7.9e-11 72.4 413 27.4
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 7.9e-11 72.4 326 29.4
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 1.0e-10 72.0 353 27.8
Lj4g0001816 Lotus japonicus HOM05D002977 ORTHO05D003225 1.0e-10 72.0 303 32.7
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 1.0e-10 72.0 404 25.2
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 1.0e-10 72.0 445 25.6
Glyma.17G132000 Glycine max HOM05D002977 ORTHO05D003225 1.8e-10 71.2 298 32.2
MELO3C005628.2 Cucumis melo HOM05D002977 ORTHO05D003225 2.3e-10 70.9 400 26.8
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 3.0e-10 70.5 364 29.1
Sed0021237 Sechium edule HOM05D002977 ORTHO05D003225 3.9e-10 70.1 301 30.2
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 3.9e-10 70.1 217 34.6
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 3.9e-10 70.1 217 34.6
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 5.1e-10 69.7 324 30.9
AUR62017299 Chenopodium quinoa HOM05D002977 ORTHO05D003225 5.1e-10 69.7 325 29.5
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 6.7e-10 69.3 316 30.1
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 6.7e-10 69.3 312 29.8
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 8.7e-10 68.9 341 29.0
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 1.1e-09 68.6 347 26.5
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 1.5e-09 68.2 339 28.9
Lj2A196T48 Lonicera japonica HOM05D002977 ORTHO05D003225 5.6e-09 66.2 311 28.3
Lalb_Chr05g0225091 Lupinus albus HOM05D002977 ORTHO05D003225 7.4e-09 65.9 266 27.1
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 7.4e-09 65.9 342 29.2
MD04G1068300 Malus domestica HOM05D002977 ORTHO05D003225 9.6e-09 65.5 235 30.2
Phvul.003G212900 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 2.1e-08 64.3 252 31.3
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 3.7e-08 63.5 347 27.1
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 1.1e-07 62.0 198 32.8
CSS0002536 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 1.4e-07 61.6 305 30.2
Sp7g21110 Schrenkiella parvula HOM05D002977 ORTHO05D003225 3.1e-07 60.5 322 27.3
AT4G23020 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 6.9e-07 59.3 270 29.6
CARHR230080 Cardamine hirsuta HOM05D002977 ORTHO05D003225 9.0e-07 58.9 259 29.3
Ah.12g057650 Amaranthus hybridus HOM05D002977 ORTHO05D003225 1.2e-06 58.5 230 30.9
Actinidia27150 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.6e-06 57.4 87 43.7
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 2.6e-06 57.4 336 30.7
FAN08G2595 Fragaria x ananassa HOM05D002524 ORTHO05D002718 4.5e-06 56.6 346 27.5
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 4.5e-06 56.6 206 32.5
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 5.8e-06 56.2 450 23.6
DCAR_006762 Daucus carota HOM05D002977 ORTHO05D003225 5.8e-06 56.2 387 23.5
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 7.6e-06 55.8 340 28.2


User provided reference genes

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