Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 6.5e-64 247.3 129 100.0
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 1.6e-30 136.3 108 66.7
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 1.7e-27 126.3 131 61.1
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 2.0e-25 119.4 131 54.2
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 6.6e-24 114.4 127 55.9
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 1.5e-23 113.2 127 51.2
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 2.5e-23 112.5 129 49.6
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 3.3e-23 112.1 131 49.6
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 7.3e-23 110.9 130 51.5
SalBow3G4069 Salvia bowleyana HOM05D005728 ORTHO05D005733 1.6e-22 109.8 131 55.0
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 4.0e-21 105.1 129 51.9
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 8.9e-21 104.0 127 48.8
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 1.5e-20 103.2 131 48.9
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 5.7e-20 101.3 125 45.6
Oeu030182.1 Olea europaea HOM05D005728 ORTHO05D005733 1.3e-19 100.1 117 51.3
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 2.2e-19 99.4 126 46.8
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 2.2e-19 99.4 126 47.6
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 2.9e-19 99.0 124 50.8
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 3.7e-19 98.6 135 44.4
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 4.9e-19 98.2 118 50.0
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 8.3e-19 97.4 130 46.2
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 1.4e-18 96.7 127 43.3
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 1.8e-18 96.3 127 43.3
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 4.1e-18 95.1 127 42.5
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 4.1e-18 95.1 127 45.7
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 4.1e-18 95.1 132 44.7
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 5.4e-18 94.7 129 47.3
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 1.6e-17 93.2 129 44.2
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 2.0e-17 92.8 128 46.1
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 2.0e-17 92.8 131 43.5
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 2.0e-17 92.8 126 43.7
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 2.0e-17 92.8 129 46.5
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 2.7e-17 92.4 130 43.1
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 5.9e-17 91.3 127 42.5
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 1.0e-16 90.5 129 43.4
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 1.0e-16 90.5 131 43.5
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 1.3e-16 90.1 135 43.0
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 1.7e-16 89.7 125 43.2
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 1.7e-16 89.7 128 44.5
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.3e-16 89.4 127 43.3
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 2.3e-16 89.4 127 43.3
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 2.3e-16 89.4 133 42.1
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 3.0e-16 89.0 134 45.5
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 3.0e-16 89.0 126 42.9
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 3.0e-16 89.0 126 42.9
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 3.0e-16 89.0 126 42.9
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 3.0e-16 89.0 126 42.9
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 3.9e-16 88.6 144 40.3
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 5.0e-16 88.2 130 42.3
MD11G1136100 Malus domestica HOM05D005728 ORTHO05D005733 5.0e-16 88.2 130 44.6
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 5.0e-16 88.2 131 44.3
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 8.6e-16 87.4 134 45.5
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.5e-15 86.7 126 42.1
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 2.5e-15 85.9 124 45.2
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.5e-15 85.9 127 41.7
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 2.5e-15 85.9 148 39.2
Oeu001270.1 Olea europaea HOM05D005728 ORTHO05D005733 4.3e-15 85.1 106 51.9
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 4.3e-15 85.1 123 42.3
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 7.3e-15 84.3 129 43.4
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 9.5e-15 84.0 129 41.9
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 1.2e-14 83.6 120 45.0
Peaxi162Scf00101g00083 Petunia axillaris HOM05D005728 ORTHO05D005733 1.6e-14 83.2 127 43.3
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 1.6e-14 83.2 129 43.4
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 2.1e-14 82.8 131 42.0
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 2.1e-14 82.8 135 38.5
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 2.8e-14 82.4 125 42.4
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 2.8e-14 82.4 124 41.1
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 2.8e-14 82.4 110 42.7
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 2.8e-14 82.4 138 44.9
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.8e-14 82.4 109 53.2
Nitab4.5_0000106g0140 Nicotiana tabacum HOM05D005728 ORTHO05D005733 3.6e-14 82.0 129 41.1
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 3.6e-14 82.0 104 51.9
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 3.6e-14 82.0 139 38.1
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 4.7e-14 81.6 129 41.9
MBI07_g19310_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 4.7e-14 81.6 137 36.5
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 4.7e-14 81.6 138 39.9
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 1.1e-13 80.5 129 40.3
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 1.1e-13 80.5 114 44.7
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 1.1e-13 80.5 133 39.8
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.4e-13 80.1 110 49.1
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 1.4e-13 80.1 125 40.8
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 1.8e-13 79.7 117 42.7
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 2.3e-13 79.3 110 49.1
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 2.3e-13 79.3 128 37.5
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 2.3e-13 79.3 125 43.2
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 3.1e-13 79.0 120 36.7
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 5.2e-13 78.2 133 41.4
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 5.2e-13 78.2 123 38.2
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 1.2e-12 77.0 135 40.0
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 2.0e-12 76.3 128 41.4
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 3.4e-12 75.5 133 38.3
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 4.4e-12 75.1 124 41.1
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 1.3e-11 73.6 126 40.5
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 1.3e-11 73.6 126 41.3
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 2.2e-11 72.8 115 41.7
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 3.7e-11 72.0 130 37.7
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 6.4e-11 71.2 132 40.9
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 1.1e-10 70.5 121 39.7
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 1.9e-10 69.7 103 39.8
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 1.9e-10 69.7 132 37.1
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 3.2e-10 68.9 124 39.5
ATR0048G010 Amborella trichopoda HOM05D005728 ORTHO05D005733 3.5e-09 65.5 121 35.5
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 4.6e-09 65.1 121 36.4
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 6.0e-09 64.7 107 43.0
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 7.8e-09 64.3 114 43.0
Ah.01g014340 Amaranthus hybridus HOM05D005728 ORTHO05D005733 2.3e-08 62.8 128 36.7
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 3.0e-08 62.4 130 36.2
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 1.9e-07 59.7 96 40.6
unitig_21.g20302 Utricularia gibba HOM05D005728 ORTHO05D005733 1.9e-07 59.7 126 38.9
A03p11060 Brassica napus HOM05D010860 ORTHO05D005733 9.5e-07 57.4 114 36.0
BraA03t10420Z Brassica rapa HOM05D010860 ORTHO05D005733 9.5e-07 57.4 114 36.0
Nitab4.5_0000196g0120 Nicotiana tabacum HOM05D005728 ORTHO05D005733 3.6e-06 55.5 132 34.1
Thhalv10014945m.g Eutrema salsugineum HOM05D010860 ORTHO05D005733 4.7e-06 55.1 138 32.6
arahy.Tifrunner.gnm1.ann1.C3ZM5V Arachis hypogaea HOM05D005728 ORTHO05D005733 6.2e-06 54.7 81 40.7


User provided reference genes

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