Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059079.1 Olea europaea HOM05D004288 ORTHO05D004997 5.2e-156 554.3 271 100.0
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 5.2e-23 112.5 121 52.9
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 7.3e-17 92.0 121 47.9
SalBow6G1935 Salvia bowleyana HOM05D004288 ORTHO05D004997 7.3e-17 92.0 119 47.1
SalBow8G0960 Salvia bowleyana HOM05D004288 ORTHO05D004997 7.3e-17 92.0 119 47.1
SalBow7G4748 Salvia bowleyana HOM05D004288 ORTHO05D004997 1.6e-16 90.9 137 45.3
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 1.1e-15 88.2 121 47.1
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 9.0e-15 85.1 118 47.5
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 9.0e-15 85.1 118 44.1
Migut.C00495 Erythranthe guttata HOM05D004288 ORTHO05D004997 2.0e-14 84.0 120 48.3
Dinv39247 Davidia involucrata HOM05D004288 ORTHO05D004997 3.4e-14 83.2 115 47.0
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 7.6e-14 82.0 122 45.9
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 9.9e-14 81.6 121 47.9
Solyc04g078010.4 Solanum lycopersicum HOM05D004288 ORTHO05D004997 2.9e-13 80.1 129 42.6
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 3.8e-13 79.7 118 44.1
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 1.9e-12 77.4 118 41.5
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 4.2e-12 76.3 125 44.8
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 5.4e-12 75.9 120 43.3
MSTRG.1030 Avicennia marina HOM05D004288 ORTHO05D004997 9.3e-12 75.1 117 46.2
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 9.3e-12 75.1 119 44.5
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 1.2e-11 74.7 115 42.6
Nitab4.5_0000934g0110 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.6e-11 74.3 116 43.1
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 1.6e-11 74.3 113 45.1
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 2.1e-11 73.9 121 43.8
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.1e-11 73.9 117 41.0
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.1e-11 73.9 118 41.5
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 2.7e-11 73.6 120 41.7
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 7.8e-11 72.0 125 38.4
Sopen04g031610 Solanum pennellii HOM05D004288 ORTHO05D004997 1.0e-10 71.6 107 44.9
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 1.3e-10 71.2 103 43.7
MSTRG.22227 Avicennia marina HOM05D004288 ORTHO05D004997 1.7e-10 70.9 116 43.1
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.7e-10 70.9 120 43.3
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 3.0e-10 70.1 119 37.0
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 3.9e-10 69.7 115 44.3
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 8.7e-10 68.6 121 42.1
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 1.1e-09 68.2 84 47.6
Nitab4.5_0014410g0020 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.5e-09 67.8 120 39.2
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 1.9e-09 67.4 119 38.7
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 1.9e-09 67.4 87 50.6
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 3.3e-09 66.6 70 51.4
Rhsim07G0221200 Rhododendron simsii HOM05D004288 ORTHO05D004997 4.3e-09 66.2 141 36.9
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 5.6e-09 65.9 131 36.6
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 5.6e-09 65.9 113 43.4
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 7.3e-09 65.5 109 43.1
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 7.3e-09 65.5 83 45.8
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 9.6e-09 65.1 113 41.6
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 9.6e-09 65.1 121 35.5
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 1.6e-08 64.3 121 39.7
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 2.8e-08 63.5 85 47.1
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 3.6e-08 63.2 86 45.3
ClCG05G020460 Citrullus lanatus HOM05D004288 ORTHO05D004997 3.6e-08 63.2 93 44.1
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 3.6e-08 63.2 116 39.7
Peaxi162Scf00160g00120 Petunia axillaris HOM05D004288 ORTHO05D004997 3.6e-08 63.2 70 52.9
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 3.6e-08 63.2 115 38.3
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 8.1e-08 62.0 84 45.2
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 8.1e-08 62.0 119 34.5
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 1.1e-07 61.6 139 36.0
SGA_v2.0_scaffold238G43969 Striga asiatica HOM05D004288 ORTHO05D004997 1.1e-07 61.6 116 36.2
TPR.G11815 Trifolium pratense HOM05D004288 ORTHO05D004997 1.1e-07 61.6 128 35.9
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 1.4e-07 61.2 115 38.3
CiPaw.04G152800 Carya illinoinensis HOM05D004288 ORTHO05D004997 1.8e-07 60.8 76 48.7
CsaV3_4G034910 Cucumis sativus L. HOM05D004288 ORTHO05D003449 1.8e-07 60.8 63 55.6
CiPaw.13G085100 Carya illinoinensis HOM05D004288 ORTHO05D004997 2.4e-07 60.5 84 45.2
MELO3C016806.2 Cucumis melo HOM05D004288 ORTHO05D004997 3.1e-07 60.1 140 35.7
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 5.3e-07 59.3 93 45.2
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 5.3e-07 59.3 96 41.7
GSVIVG01037855001 Vitis vinifera HOM05D004288 ORTHO05D004997 6.9e-07 58.9 113 40.7
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 9.0e-07 58.5 115 38.3
TAR381G1169 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.2e-06 58.2 92 45.7
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 1.5e-06 57.8 121 39.7
Ah.05g167180 Amaranthus hybridus HOM05D004288 ORTHO05D004997 2.0e-06 57.4 94 40.4
Sc02g0007800 Simmondsia chinensis HOM05D003189 ORTHO05D003449 2.0e-06 57.4 76 44.7
SGA_v2.0_scaffold14G06935 Striga asiatica HOM05D004288 ORTHO05D004997 2.0e-06 57.4 122 37.7
HanXRQChr01g0027971 Helianthus annuus HOM05D004288 ORTHO05D004997 2.6e-06 57.0 88 39.8
Hund14391 Selenicereus undatus HOM05D004288 ORTHO05D004997 2.6e-06 57.0 66 51.5
EL10As7g23804 Beta vulgaris HOM05D004288 ORTHO05D004997 4.5e-06 56.2 77 46.8
RcHm_v2.0_Chr6g0309361 Rosa chinensis HOM05D004288 ORTHO05D004997 4.5e-06 56.2 111 37.8
PSO541G1266 Papaver somniferum HOM05D004288 ORTHO05D004997 5.8e-06 55.8 87 43.7
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 7.6e-06 55.5 98 41.8
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 9.9e-06 55.1 92 47.8
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 9.9e-06 55.1 117 38.5
Sed0026714 Sechium edule HOM05D004288 ORTHO05D004997 9.9e-06 55.1 69 47.8


User provided reference genes

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