Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059023.1 Olea europaea HOM05D001552 ORTHO05D006640 9.8e-59 229.9 118 100.0
MSTRG.19038 Avicennia marina HOM05D001552 ORTHO05D006640 2.1e-16 89.4 145 37.9
Nitab4.5_0004868g0020 Nicotiana tabacum HOM05D001552 ORTHO05D006640 2.7e-16 89.0 131 42.0
Duzib093G0934 Durio zibethinus HOM05D001552 ORTHO05D006640 3.5e-16 88.6 132 41.7
Gohir.D04G127600 Gossypium hirsutum HOM05D001552 ORTHO05D006640 3.5e-16 88.6 133 41.4
Gohir.A04G087200 Gossypium hirsutum HOM05D001552 ORTHO05D006640 4.6e-16 88.2 133 41.4
Gorai.012G110600 Gossypium raimondii HOM05D001552 ORTHO05D006640 4.6e-16 88.2 133 41.4
Prupe.6G268400 Prunus persica HOM05D001552 ORTHO05D006640 6.0e-16 87.8 144 38.9
QL07p036368 Quercus lobata HOM05D001552 ORTHO05D006640 6.0e-16 87.8 149 38.9
Thecc.05G024400 Theobroma cacao HOM05D001552 ORTHO05D006640 6.0e-16 87.8 132 41.7
Nitab4.5_0000652g0130 Nicotiana tabacum HOM05D001552 ORTHO05D006640 1.3e-15 86.7 131 41.2
Haze_20928 Corylus avellana HOM05D001552 ORTHO05D006640 2.3e-15 85.9 153 37.3
Oeu030542.1 Olea europaea HOM05D001552 ORTHO05D006640 2.3e-15 85.9 69 66.7
Solyc10g085040.1 Solanum lycopersicum HOM05D001552 ORTHO05D006640 2.3e-15 85.9 131 42.0
Nn2g13573 Nelumbo nucifera HOM05D001552 ORTHO05D006640 3.0e-15 85.5 142 38.7
Peaxi162Scf00009g00246 Petunia axillaris HOM05D001552 ORTHO05D006640 3.0e-15 85.5 131 42.0
PGSC0003DMG400041963 Solanum tuberosum HOM05D001552 ORTHO05D006640 3.9e-15 85.1 131 42.0
Cfa017273 Carpinus fangiana HOM05D001552 ORTHO05D006640 6.7e-15 84.3 153 37.9
Manes.09G100772 Manihot esculenta HOM05D001552 ORTHO05D006640 6.7e-15 84.3 148 37.2
Ciclev10012815m.g Citrus clementina HOM05D001552 ORTHO05D006640 8.7e-15 84.0 132 40.2
COL.COLO4_14636 Corchorus olitorius HOM05D001552 ORTHO05D003294 8.7e-15 84.0 142 38.0
Peaxi162Scf00009g00245 Petunia axillaris HOM05D001552 ORTHO05D006640 8.7e-15 84.0 131 41.2
Rhsim05G0203000 Rhododendron simsii HOM05D001552 ORTHO05D006640 8.7e-15 84.0 140 38.6
Sopen10g034500 Solanum pennellii HOM05D001552 ORTHO05D006640 8.7e-15 84.0 131 41.2
Psat7g242120 Pisum sativum HOM05D001552 ORTHO05D006640 1.1e-14 83.6 129 40.3
COL.COLO4_14635 Corchorus olitorius HOM05D001552 ORTHO05D006640 1.5e-14 83.2 144 37.5
CAN.G502.3 Capsicum annuum HOM05D001552 ORTHO05D006640 1.9e-14 82.8 134 40.3
Lj2C83T18 Lonicera japonica HOM05D001552 ORTHO05D006640 2.5e-14 82.4 130 40.0
Medtr4g019150 Medicago truncatula HOM05D001552 ORTHO05D006640 2.5e-14 82.4 134 40.3
TWI74G0400 Tripterygium wilfordii HOM05D001552 ORTHO05D006640 2.5e-14 82.4 142 38.0
MD04G1144100 Malus domestica HOM05D001552 ORTHO05D006640 3.3e-14 82.0 134 39.6
VMungo0331G1215 Vigna mungo HOM05D001552 ORTHO05D006640 5.6e-14 81.3 144 37.5
CANSAT35G0796 Cannabis sativa HOM05D001552 ORTHO05D006640 7.4e-14 80.9 141 37.6
MD12G1158200 Malus domestica HOM05D001552 ORTHO05D006640 7.4e-14 80.9 134 38.8
Atru.chr8.2125 Acer truncatum HOM05D001552 ORTHO05D006640 9.6e-14 80.5 137 38.0
Dinv35523 Davidia involucrata HOM05D001552 ORTHO05D006640 9.6e-14 80.5 129 41.1
PGSC0003DMG400011016 Solanum tuberosum HOM05D001552 ORTHO05D006640 1.3e-13 80.1 131 39.7
SGA_v2.0_scaffold85G26786 Striga asiatica HOM05D001552 ORTHO05D006640 1.3e-13 80.1 146 34.9
Cpa.g.sc56.92 Carica papaya HOM05D001552 ORTHO05D006640 1.6e-13 79.7 138 37.0
FvH4_6g12281 Fragaria vesca HOM05D001552 ORTHO05D006640 1.6e-13 79.7 148 35.1
MELO3C009202.2 Cucumis melo HOM05D001552 ORTHO05D006640 2.1e-13 79.3 130 38.5
CsaV3_3G034280 Cucumis sativus L. HOM05D001552 ORTHO05D006640 2.1e-13 79.3 130 38.5
Nn2g13571 Nelumbo nucifera HOM05D001552 ORTHO05D006640 2.1e-13 79.3 142 36.6
TAR636G2148 Trochodendron aralioides HOM05D001552 ORTHO05D006640 2.1e-13 79.3 156 34.0
FAN05G1644 Fragaria x ananassa HOM05D001552 ORTHO05D006640 2.8e-13 79.0 142 35.9
FAN09G2912 Fragaria x ananassa HOM05D001552 ORTHO05D006640 2.8e-13 79.0 142 35.9
Sopen10g034490 Solanum pennellii HOM05D001552 ORTHO05D006640 2.8e-13 79.0 131 38.9
MBI05_g36623_MAGBIO Magnolia biondii HOM05D001552 ORTHO05D006640 3.7e-13 78.6 137 35.8
CSS0039160 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D006640 6.2e-13 77.8 143 35.7
ECA248G1430 Erigeron canadensis HOM05D001552 ORTHO05D006640 6.2e-13 77.8 138 35.5
DCAR_010396 Daucus carota HOM05D001552 ORTHO05D006640 8.1e-13 77.4 144 35.4
Lalb_Chr12g0206741 Lupinus albus HOM05D001552 ORTHO05D006640 8.1e-13 77.4 146 35.6
Sabra16G0106100 Salix brachista HOM05D001552 ORTHO05D006640 8.1e-13 77.4 135 37.0
Solyc10g085030.1 Solanum lycopersicum HOM05D001552 ORTHO05D006640 8.1e-13 77.4 128 39.1
Sc07g0006920 Simmondsia chinensis HOM05D001552 ORTHO05D006640 1.1e-12 77.0 149 34.2
FAN14G3299 Fragaria x ananassa HOM05D001552 ORTHO05D006640 1.4e-12 76.6 142 35.2
TAR636G3539 Trochodendron aralioides HOM05D001552 ORTHO05D006640 1.4e-12 76.6 150 33.3
Glyma.03G074600 Glycine max HOM05D001552 ORTHO05D006640 1.8e-12 76.3 143 35.0
AUR62019028 Chenopodium quinoa HOM05D001552 ORTHO05D006640 2.4e-12 75.9 142 35.9
PGR031G3644 Punica granatum HOM05D001552 ORTHO05D006640 2.4e-12 75.9 143 34.3
Sed0010206 Sechium edule HOM05D001552 ORTHO05D006640 2.4e-12 75.9 127 37.0
Lsat_1_v5_gn_5_154760 Lactuca sativa HOM05D001552 ORTHO05D006640 3.1e-12 75.5 137 35.8
Psat7g242040 Pisum sativum HOM05D001552 ORTHO05D006640 3.1e-12 75.5 137 36.5
Potri.016G109400 Populus trichocarpa HOM05D001552 ORTHO05D006640 3.1e-12 75.5 145 36.6
Ah.05g170730 Amaranthus hybridus HOM05D001552 ORTHO05D006640 4.0e-12 75.1 143 34.3
Ca_20105_v3 Cicer arietinum L. HOM05D001552 ORTHO05D006640 4.0e-12 75.1 135 37.0
CSS0041969 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D006640 5.3e-12 74.7 143 34.3
RcHm_v2.0_Chr3g0464101 Rosa chinensis HOM05D001552 ORTHO05D006640 5.3e-12 74.7 132 36.4
EL10Ac1g01073 Beta vulgaris HOM05D001552 ORTHO05D006640 6.9e-12 74.3 148 33.8
ClCG10G021690 Citrullus lanatus HOM05D001552 ORTHO05D006640 6.9e-12 74.3 130 36.9
AUR62027865 Chenopodium quinoa HOM05D001552 ORTHO05D006640 1.2e-11 73.6 142 35.2
Medtr4g019130 Medicago truncatula HOM05D001552 ORTHO05D006640 1.2e-11 73.6 136 35.3
C04p09690 Brassica napus HOM05D001552 ORTHO05D006640 1.5e-11 73.2 143 34.3
BolC4t22576H Brassica oleracea HOM05D001552 ORTHO05D006640 1.5e-11 73.2 143 34.3
Migut.J00240 Erythranthe guttata HOM05D001552 ORTHO05D006640 2.0e-11 72.8 147 34.7
A03p20980 Brassica napus HOM05D001552 ORTHO05D006640 2.6e-11 72.4 139 34.5
BraA03t11337Z Brassica rapa HOM05D001552 ORTHO05D006640 2.6e-11 72.4 139 34.5
CSS0049639 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D006640 2.6e-11 72.4 143 34.3
TPR.G8218 Trifolium pratense HOM05D001552 ORTHO05D006640 2.6e-11 72.4 134 35.8
BraA05t19769Z Brassica rapa HOM05D001552 ORTHO05D006640 4.5e-11 71.6 142 33.1
Lj3g0019847 Lotus japonicus HOM05D001552 ORTHO05D006640 4.5e-11 71.6 144 34.0
Glyma.01G109500 Glycine max HOM05D001552 ORTHO05D006640 5.8e-11 71.2 145 33.1
Phvul.010G006500 Phaseolus vulgaris HOM05D001552 ORTHO05D006640 5.8e-11 71.2 149 32.2
BcaC02g11937 Brassica carinata HOM05D001552 ORTHO05D006640 9.9e-11 70.5 144 33.3
DCAR_012162 Daucus carota HOM05D001552 ORTHO05D006640 1.3e-10 70.1 140 33.6
BcaB01g03737 Brassica carinata HOM05D001552 ORTHO05D006640 1.7e-10 69.7 138 33.3
A05p08020 Brassica napus HOM05D001552 ORTHO05D006640 2.2e-10 69.3 141 32.6
THA.LOC109116897 Tarenaya hassleriana HOM05D001552 ORTHO05D006640 2.9e-10 68.9 130 34.6
BcaC01g05581 Brassica carinata HOM05D001552 ORTHO05D006640 3.8e-10 68.6 139 33.1
C03p24640 Brassica napus HOM05D001552 ORTHO05D006640 3.8e-10 68.6 139 33.1
BolC3t14860H Brassica oleracea HOM05D001552 ORTHO05D006640 3.8e-10 68.6 139 33.1
PGR031G0217 Punica granatum HOM05D001552 ORTHO05D006640 3.8e-10 68.6 134 33.6
PSO384G0489 Papaver somniferum HOM05D001552 ORTHO05D006640 4.9e-10 68.2 154 31.8
SGA_v2.0_scaffold75G24989 Striga asiatica HOM05D001552 ORTHO05D006640 4.9e-10 68.2 70 50.0
FAN14G4773 Fragaria x ananassa HOM05D001552 ORTHO05D006640 8.4e-10 67.4 63 54.0
BcaB02g09231 Brassica carinata HOM05D001552 ORTHO05D006640 1.1e-09 67.0 144 31.9
CDE02G1139 Ceratophyllum demersum HOM05D001552 ORTHO05D006640 1.1e-09 67.0 64 53.1
Os01g0850900 Oryza sativa ssp. japonica HOM05D001552 ORTHO05D006640 1.9e-09 66.2 164 29.9
Aqoxy7G01829 Aquilegia oxysepala HOM05D001552 ORTHO05D006640 2.4e-09 65.9 63 54.0
CSS0016608 Camellia sinensis var. sinensis HOM05D001552 ORTHO05D006640 2.4e-09 65.9 143 31.5
AL4G34940 Arabidopsis lyrata HOM05D001552 ORTHO05D006640 4.2e-09 65.1 69 52.2
BcaNung05975 Brassica carinata HOM05D001552 ORTHO05D006640 4.2e-09 65.1 63 54.0
Aa31sc250G20 Aethionema arabicum HOM05D001552 ORTHO05D006640 5.5e-09 64.7 145 31.7
CARHR132520 Cardamine hirsuta HOM05D001552 ORTHO05D006640 5.5e-09 64.7 149 31.5
PSO339G5296 Papaver somniferum HOM05D001552 ORTHO05D006640 5.5e-09 64.7 154 31.2
A04p29110 Brassica napus HOM05D001552 ORTHO05D006640 9.3e-09 63.9 57 57.9
BraA04t18381Z Brassica rapa HOM05D001552 ORTHO05D006640 9.3e-09 63.9 63 54.0
AT2G37970 Arabidopsis thaliana HOM05D001552 ORTHO05D006640 1.2e-08 63.5 69 46.4
unitig_8.g3235 Utricularia gibba HOM05D001552 ORTHO05D006640 1.2e-08 63.5 69 46.4
BolC4t28138H Brassica oleracea HOM05D001552 ORTHO05D006640 2.1e-08 62.8 57 57.9
Sp4g20280 Schrenkiella parvula HOM05D001552 ORTHO05D006640 2.1e-08 62.8 154 30.5
BcaC02g11936 Brassica carinata HOM05D001552 ORTHO05D006640 2.7e-08 62.4 144 31.9
TWI53G1370 Tripterygium wilfordii HOM05D001552 ORTHO05D006640 2.7e-08 62.4 127 37.8
C04p66330 Brassica napus HOM05D001552 ORTHO05D006640 3.5e-08 62.0 57 57.9
Thhalv10017151m.g Eutrema salsugineum HOM05D001552 ORTHO05D006640 4.6e-08 61.6 69 49.3
Ca_20107_v3 Cicer arietinum L. HOM05D001552 ORTHO05D006640 6.0e-08 61.2 63 52.4
Carub.0004s1993 Capsella rubella HOM05D001552 ORTHO05D006640 7.9e-08 60.8 152 30.3
GSVIVG01034028001 Vitis vinifera HOM05D000559 ORTHO05D003606 3.0e-07 58.9 95 38.9
Zm00001eb367650 Zea mays HOM05D001552 ORTHO05D006640 3.9e-07 58.5 159 28.3
HanXRQChr05g0136921 Helianthus annuus HOM05D001552 ORTHO05D006640 6.7e-07 57.8 111 36.9
Actinidia13797 Actinidia chinensis HOM05D001552 ORTHO05D006640 5.6e-06 54.7 124 33.1


User provided reference genes

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