Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 6.2e-39 163.7 85 100.0
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 2.8e-31 138.3 80 88.8
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 5.1e-17 90.9 90 54.4
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 2.2e-15 85.5 88 51.1
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 2.2e-15 85.5 86 55.8
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 4.8e-15 84.3 87 54.0
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 4.8e-15 84.3 88 51.1
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.1e-14 83.2 95 53.7
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.4e-14 82.8 95 52.6
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 2.4e-14 82.0 93 53.8
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 3.1e-14 81.6 95 51.6
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 6.9e-14 80.5 83 55.4
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 6.9e-14 80.5 91 51.6
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.2e-13 79.7 92 51.1
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 1.5e-13 79.3 83 51.8
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 1.5e-13 79.3 80 53.8
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 2.0e-13 79.0 86 54.7
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 2.6e-13 78.6 86 51.2
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 3.4e-13 78.2 75 53.3
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 1.3e-12 76.3 89 47.2
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 1.3e-12 76.3 87 51.7
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.7e-12 75.9 88 53.4
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 2.9e-12 75.1 85 52.9
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 2.9e-12 75.1 81 51.9
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 2.9e-12 75.1 86 45.3
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 2.9e-12 75.1 76 52.6
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 3.8e-12 74.7 97 45.4
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 5.0e-12 74.3 79 48.1
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 6.5e-12 73.9 89 48.3
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 6.5e-12 73.9 82 52.4
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.1e-11 73.2 91 50.5
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 2.5e-11 72.0 64 57.8
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 3.2e-11 71.6 90 47.8
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 3.2e-11 71.6 86 45.3
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 4.2e-11 71.2 87 52.9
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 5.5e-11 70.9 89 46.1
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 5.5e-11 70.9 88 43.2
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 7.2e-11 70.5 85 49.4
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 9.4e-11 70.1 84 50.0
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 1.2e-10 69.7 84 47.6
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 1.6e-10 69.3 86 44.2
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 2.1e-10 68.9 84 45.2
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 2.7e-10 68.6 77 48.1
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 1.4e-09 66.2 93 47.3
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 6.7e-09 63.9 87 41.4
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 6.7e-09 63.9 71 47.9
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 6.7e-09 63.9 77 44.2
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 8.8e-09 63.5 90 42.2
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 8.8e-09 63.5 87 41.4
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 2.5e-08 62.0 42 61.9
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 2.5e-08 62.0 61 45.9
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 2.5e-08 62.0 39 59.0
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 5.7e-08 60.8 36 66.7
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.7e-07 59.3 88 37.5
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 3.7e-07 58.2 36 61.1
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 8.2e-07 57.0 98 35.7
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 1.4e-06 56.2 80 45.0
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 1.8e-06 55.8 37 54.1
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 5.3e-06 54.3 44 50.0


User provided reference genes

Program Settings