Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058867.1 Olea europaea HOM05D000347 ORTHO05D008062 1.1e-37 159.5 79 100.0
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 1.1e-21 106.3 81 71.6
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 1.3e-19 99.4 76 67.1
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 2.3e-19 98.6 78 62.8
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 2.3e-19 98.6 78 64.1
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 3.0e-19 98.2 78 65.4
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 6.6e-19 97.1 78 64.1
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 1.1e-18 96.3 78 62.8
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 1.5e-18 95.9 82 64.6
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 1.3e-17 92.8 78 62.8
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 1.6e-17 92.4 67 68.7
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 3.6e-17 91.3 78 60.3
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 6.2e-17 90.5 67 67.2
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 1.4e-16 89.4 67 65.7
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 1.8e-16 89.0 82 58.5
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 2.4e-16 88.6 68 64.7
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 5.3e-16 87.4 75 61.3
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 5.3e-16 87.4 82 53.7
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 6.9e-16 87.0 67 67.2
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 9.0e-16 86.7 67 64.2
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 1.2e-15 86.3 67 67.2
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 1.5e-15 85.9 80 60.0
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 2.0e-15 85.5 67 62.7
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 2.6e-15 85.1 67 59.7
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 2.6e-15 85.1 67 59.7
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 3.4e-15 84.7 68 64.7
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 3.4e-15 84.7 74 56.8
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 3.4e-15 84.7 74 56.8
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 3.4e-15 84.7 74 56.8
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 4.5e-15 84.3 67 61.2
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 4.5e-15 84.3 67 64.2
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 4.5e-15 84.3 80 58.8
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 4.5e-15 84.3 80 56.2
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 5.8e-15 84.0 76 57.9
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 5.8e-15 84.0 67 64.2
CsaV3_3G028770 Cucumis sativus L. HOM05D000347 ORTHO05D008062 1.3e-14 82.8 67 62.7
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 1.3e-14 82.8 79 54.4
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 1.7e-14 82.4 80 57.5
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 1.7e-14 82.4 80 57.5
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.7e-14 82.4 78 56.4
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 2.2e-14 82.0 67 61.2
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 2.2e-14 82.0 80 53.8
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 2.9e-14 81.6 72 54.2
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 2.9e-14 81.6 68 64.7
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 2.9e-14 81.6 82 58.5
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 3.8e-14 81.3 80 56.2
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 4.9e-14 80.9 67 61.2
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 8.4e-14 80.1 67 62.7
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 8.4e-14 80.1 68 61.8
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 1.1e-13 79.7 65 58.5
Nitab4.5_0003790g0070 Nicotiana tabacum HOM05D000347 ORTHO05D008062 1.1e-13 79.7 68 61.8
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 1.4e-13 79.3 82 53.7
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 3.2e-13 78.2 68 57.4
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 3.2e-13 78.2 68 57.4
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 3.2e-13 78.2 68 57.4
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 3.2e-13 78.2 67 58.2
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 4.2e-13 77.8 82 54.9
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 5.4e-13 77.4 67 55.2
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 5.4e-13 77.4 67 58.2
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 7.1e-13 77.0 78 53.8
vmacro02746 Vaccinium macrocarpon HOM05D000347 ORTHO05D008062 9.3e-13 76.6 68 61.8
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 1.2e-12 76.3 67 58.2
Sed0024241 Sechium edule HOM05D000347 ORTHO05D008062 1.2e-12 76.3 77 53.2
Sed0024927 Sechium edule HOM05D000901 ORTHO05D008062 2.7e-12 75.1 67 58.2
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 1.0e-11 73.2 68 55.9
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 1.0e-11 73.2 69 58.0
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 3.0e-11 71.6 68 55.9
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 3.0e-11 71.6 71 54.9
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 5.1e-11 70.9 71 54.9
Atru.chr5.2056 Acer truncatum HOM05D000347 ORTHO05D008062 1.5e-10 69.3 75 50.7
DCAR_004713 Daucus carota HOM05D000347 ORTHO05D008062 2.5e-10 68.6 67 58.2
AUR62008877 Chenopodium quinoa HOM05D000347 ORTHO05D008062 3.3e-10 68.2 68 54.4
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 3.3e-10 68.2 75 53.3
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 5.6e-10 67.4 79 49.4
Sc24g0003600 Simmondsia chinensis HOM05D000347 ORTHO05D008062 1.6e-09 65.9 67 46.3
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 2.8e-09 65.1 71 49.3
Peaxi162Scf00517g00428 Petunia axillaris HOM05D000347 ORTHO05D008062 1.1e-08 63.2 62 58.1
DCAR_018551 Daucus carota HOM05D000347 ORTHO05D008062 1.4e-08 62.8 65 49.2
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 2.4e-08 62.0 67 53.7
MBI07_g21075_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D008062 2.0e-07 58.9 69 58.0
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 2.2e-06 55.5 74 43.2
Ah.08g214040 Amaranthus hybridus HOM05D000901 ORTHO05D008062 2.9e-06 55.1 67 47.8
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 8.4e-06 53.5 74 41.9


User provided reference genes

Program Settings